RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 FAM19A5Q7Z5A7 132 aaPredicted RBP8.44□□□□□ -1.06
CAPN3-203ENST00000349748 PRNDQ9UKY0 176 aa8.44□□□□□ -1.06
CAPN3-203ENST00000349748 CHCHD2Q9Y6H1 151 aaPredicted RBP8.44□□□□□ -1.06
CAPN3-203ENST00000349748 HLA-DRB4X5D2U9 266 aa8.44□□□□□ -1.06
CAPN3-203ENST00000349748 INTS1Q8N201 2190 aaKnown RBP8.44□□□□□ -1.06
CAPN3-203ENST00000349748 SPTBN4Q9H254 2564 aa8.44□□□□□ -1.06
CAPN3-203ENST00000349748 MYMXA0A1B0GTQ4 84 aa8.43□□□□□ -1.06
CAPN3-203ENST00000349748 PCNX2A6NKB5 2137 aa8.43□□□□□ -1.06
CAPN3-203ENST00000349748 ZNF785A8K8V0 405 aa8.43□□□□□ -1.06
CAPN3-203ENST00000349748 WNT9BO14905 357 aa8.43□□□□□ -1.06
CAPN3-203ENST00000349748 ZFAND5O76080 213 aa8.43□□□□□ -1.06
CAPN3-203ENST00000349748 DPM2O94777 84 aa8.43□□□□□ -1.06
CAPN3-203ENST00000349748 LEPP41159 167 aa8.43□□□□□ -1.06
CAPN3-203ENST00000349748 SSR4P51571 173 aa8.43□□□□□ -1.06
CAPN3-203ENST00000349748 ASCL5Q7RTU5 278 aa8.43□□□□□ -1.06
CAPN3-203ENST00000349748 C15orf53Q8NAA6 179 aa8.43□□□□□ -1.06
CAPN3-203ENST00000349748 S1PR3Q99500 378 aa8.43□□□□□ -1.06
CAPN3-203ENST00000349748 C1orf229Q6ZS94 237 aaPredicted RBP8.43□□□□□ -1.06
CAPN3-203ENST00000349748 LINC00305Q7Z4B0 112 aa8.43□□□□□ -1.06
CAPN3-203ENST00000349748 FMC1Q96HJ9 113 aa8.43□□□□□ -1.06
CAPN3-203ENST00000349748 MRPL35Q9NZE8 188 aaKnown RBP8.43□□□□□ -1.06
CAPN3-203ENST00000349748 OOSP1A8MZH6 123 aa8.43□□□□□ -1.06
CAPN3-203ENST00000349748 SCRG1O75711 98 aa8.43□□□□□ -1.06
CAPN3-203ENST00000349748 TCRAP04437 139 aa8.43□□□□□ -1.06
CAPN3-203ENST00000349748 FOXG1P55316 489 aaPredicted RBP8.43□□□□□ -1.06
CAPN3-203ENST00000349748 MRPL51Q4U2R6 128 aaKnown RBP8.43□□□□□ -1.06
CAPN3-203ENST00000349748 PRR30Q53SZ7 412 aaPredicted RBP8.43□□□□□ -1.06
CAPN3-203ENST00000349748 CXorf67Q86X51 503 aaPredicted RBP8.43□□□□□ -1.06
CAPN3-203ENST00000349748 FREM1Q5H8C1 2179 aa8.42□□□□□ -1.06
CAPN3-203ENST00000349748 FSTL3O95633 263 aa8.42□□□□□ -1.06
CAPN3-203ENST00000349748 FKBP2P26885 142 aaKnown RBP8.42□□□□□ -1.06
CAPN3-203ENST00000349748 UBE2D3P61077 147 aa8.42□□□□□ -1.06
CAPN3-203ENST00000349748 UBE2D2P62837 147 aa8.42□□□□□ -1.06
CAPN3-203ENST00000349748 SPRNQ5BIV9 151 aa8.42□□□□□ -1.06
CAPN3-203ENST00000349748 UTF1Q5T230 341 aa8.42□□□□□ -1.06
CAPN3-203ENST00000349748 ZNF493Q6ZR52 646 aa8.42□□□□□ -1.06
CAPN3-203ENST00000349748 OR1L4Q8NGR5 311 aa8.42□□□□□ -1.06
CAPN3-203ENST00000349748 OR10J6PQ8NGY7 276 aa8.42□□□□□ -1.06
CAPN3-203ENST00000349748 PRR7Q8TB68 274 aa8.42□□□□□ -1.06
CAPN3-203ENST00000349748 ODF3Q96PU9 254 aa8.42□□□□□ -1.06
CAPN3-203ENST00000349748 TMEM14BQ9NUH8 114 aa8.42□□□□□ -1.06
CAPN3-203ENST00000349748 KLK5Q9Y337 293 aaPredicted RBP8.42□□□□□ -1.06
CAPN3-203ENST00000349748 ASPMQ8IZT6 3477 aa8.42□□□□□ -1.06
CAPN3-203ENST00000349748 NDUFA3O95167 84 aa8.42□□□□□ -1.06
CAPN3-203ENST00000349748 GAS8-AS1O95177 125 aa8.42□□□□□ -1.06
CAPN3-203ENST00000349748 GRPP07492 148 aa8.42□□□□□ -1.06
CAPN3-203ENST00000349748 ORM2P19652 201 aa8.42□□□□□ -1.06
CAPN3-203ENST00000349748 Q86TA4 180 aa8.42□□□□□ -1.06
CAPN3-203ENST00000349748 DEFB126Q9BYW3 111 aa8.42□□□□□ -1.06
CAPN3-203ENST00000349748 ZNF883P0CG24 379 aa8.41□□□□□ -1.06
CAPN3-203ENST00000349748 CKS2P33552 79 aa8.41□□□□□ -1.06
CAPN3-203ENST00000349748 ASIPP42127 132 aa8.41□□□□□ -1.06
CAPN3-203ENST00000349748 CRIP2P52943 208 aaPredicted RBP8.41□□□□□ -1.06
CAPN3-203ENST00000349748 FAM104BQ5XKR9 115 aa8.41□□□□□ -1.06
CAPN3-203ENST00000349748 LEAP2Q969E1 77 aa8.41□□□□□ -1.06
CAPN3-203ENST00000349748 GNG12Q9UBI6 72 aa8.41□□□□□ -1.06
CAPN3-203ENST00000349748 METRNQ9UJH8 293 aa8.41□□□□□ -1.06
CAPN3-203ENST00000349748 DOCK7Q96N67 2140 aa8.41□□□□□ -1.06
CAPN3-203ENST00000349748 DOCK10Q96BY6 2186 aa8.41□□□□□ -1.06
CAPN3-203ENST00000349748 SHISA9B4DS77 424 aa8.41□□□□□ -1.06
CAPN3-203ENST00000349748 SPINT2O43291 252 aa8.41□□□□□ -1.06
CAPN3-203ENST00000349748 CCL3P10147 92 aa8.41□□□□□ -1.06
CAPN3-203ENST00000349748 GOLT1AQ6ZVE7 132 aa8.41□□□□□ -1.06
CAPN3-203ENST00000349748 SBSPONQ8IVN8 264 aa8.41□□□□□ -1.06
CAPN3-203ENST00000349748 TRGV9Q99603 122 aa8.41□□□□□ -1.06
CAPN3-203ENST00000349748 FOXA2Q9Y261 457 aaPredicted RBP8.41□□□□□ -1.06
CAPN3-203ENST00000349748 U3KQK5 164 aa8.41□□□□□ -1.06
CAPN3-203ENST00000349748 TNRC6BQ9UPQ9 1833 aaKnown RBP8.41□□□□□ -1.06
CAPN3-203ENST00000349748 NTN3O00634 580 aaPredicted RBP8.4□□□□□ -1.06
CAPN3-203ENST00000349748 WIPF1O43516 503 aa8.4□□□□□ -1.06
CAPN3-203ENST00000349748 CXCL13O43927 109 aa8.4□□□□□ -1.06
CAPN3-203ENST00000349748 NBL1P41271 181 aa8.4□□□□□ -1.06
CAPN3-203ENST00000349748 ZNF134P52741 427 aa8.4□□□□□ -1.06
CAPN3-203ENST00000349748 EDDM3AQ14507 147 aa8.4□□□□□ -1.06
CAPN3-203ENST00000349748 TWIST1Q15672 202 aa8.4□□□□□ -1.06
CAPN3-203ENST00000349748 Q6Q795 121 aa8.4□□□□□ -1.06
CAPN3-203ENST00000349748 C1orf162Q8NEQ5 155 aaPredicted RBP8.4□□□□□ -1.06
CAPN3-203ENST00000349748 IFI27L2Q9H2X8 130 aa8.4□□□□□ -1.06
CAPN3-203ENST00000349748 Q9H3A6 140 aa8.4□□□□□ -1.06
CAPN3-203ENST00000349748 IGHG4P01861 327 aa8.4□□□□□ -1.06
CAPN3-203ENST00000349748 SCGB1C2P0DMR2 95 aa8.4□□□□□ -1.06
CAPN3-203ENST00000349748 TMEM155Q4W5P6 130 aa8.4□□□□□ -1.06
CAPN3-203ENST00000349748 ZNF474Q6S9Z5 364 aaPredicted RBP8.4□□□□□ -1.06
CAPN3-203ENST00000349748 ZNF826PQ6ZT77 177 aa8.4□□□□□ -1.06
CAPN3-203ENST00000349748 EDA2RQ9HAV5 297 aa8.4□□□□□ -1.06
CAPN3-203ENST00000349748 OBP2BQ9NPH6 170 aa8.4□□□□□ -1.06
CAPN3-203ENST00000349748 NCBP2LA6PVI3 153 aaKnown RBP8.4□□□□□ -1.07
CAPN3-203ENST00000349748 C9JAW5 83 aa8.4□□□□□ -1.07
CAPN3-203ENST00000349748 CD69Q07108 199 aa8.4□□□□□ -1.07
CAPN3-203ENST00000349748 LYZL1Q6UWQ5 148 aa8.4□□□□□ -1.07
CAPN3-203ENST00000349748 GATD1Q8NB37 220 aa8.4□□□□□ -1.07
CAPN3-203ENST00000349748 ZNF714Q96N38 554 aa8.4□□□□□ -1.07
CAPN3-203ENST00000349748 HIGD1AQ9Y241 93 aa8.4□□□□□ -1.07
CAPN3-203ENST00000349748 DSCAML1Q8TD84 2053 aa8.4□□□□□ -1.07
CAPN3-203ENST00000349748 SLC25A20O43772 301 aa8.39□□□□□ -1.07
CAPN3-203ENST00000349748 OR11H6Q8NGC7 330 aa8.39□□□□□ -1.07
CAPN3-203ENST00000349748 NTN5Q8WTR8 489 aaPredicted RBP8.39□□□□□ -1.07
CAPN3-203ENST00000349748 AAMDCQ9H7C9 122 aa8.39□□□□□ -1.07
CAPN3-203ENST00000349748 A0A1W2PPI3 338 aa8.39□□□□□ -1.07
CAPN3-203ENST00000349748 KIR2DS2P43631 304 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms