RNA–Protein interactions for RNA: ENST00000348749.9

CHRNA1-202, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA1, Length 1,984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-202ENST00000348749 TMEM213A2RRL7 107 aa8.15□□□□□ -1.11
CHRNA1-202ENST00000348749 LINC01619G3V211 115 aa8.15□□□□□ -1.11
CHRNA1-202ENST00000348749 APOMO95445 188 aa8.15□□□□□ -1.11
CHRNA1-202ENST00000348749 NPYP01303 97 aa8.15□□□□□ -1.11
CHRNA1-202ENST00000348749 SPINK8P0C7L1 97 aa8.15□□□□□ -1.11
CHRNA1-202ENST00000348749 CRIP1P50238 77 aa8.15□□□□□ -1.11
CHRNA1-202ENST00000348749 FAM201AQ5SY85 155 aa8.15□□□□□ -1.11
CHRNA1-202ENST00000348749 DUX4L9Q6RFH8 374 aaPredicted RBP8.15□□□□□ -1.11
CHRNA1-202ENST00000348749 LYZL1Q6UWQ5 148 aa8.15□□□□□ -1.11
CHRNA1-202ENST00000348749 SEM1Q6ZVN7 128 aa8.15□□□□□ -1.11
CHRNA1-202ENST00000348749 TTTY13Q9BZ97 58 aa8.15□□□□□ -1.11
CHRNA1-202ENST00000348749 SLC25A39Q9BZJ4 359 aaPredicted RBP8.15□□□□□ -1.11
CHRNA1-202ENST00000348749 ERG28Q9UKR5 140 aa8.15□□□□□ -1.11
CHRNA1-202ENST00000348749 PSG8Q9UQ74 426 aa8.15□□□□□ -1.11
CHRNA1-202ENST00000348749 ATP5LO75964 103 aa8.14□□□□□ -1.11
CHRNA1-202ENST00000348749 IGLV2-23P01705 113 aa8.14□□□□□ -1.11
CHRNA1-202ENST00000348749 FCER1GP30273 86 aa8.14□□□□□ -1.11
CHRNA1-202ENST00000348749 ZNF474Q6S9Z5 364 aaPredicted RBP8.14□□□□□ -1.11
CHRNA1-202ENST00000348749 EXOC3-AS1Q8N2X6 119 aa8.14□□□□□ -1.11
CHRNA1-202ENST00000348749 DPM2O94777 84 aa8.13□□□□□ -1.11
CHRNA1-202ENST00000348749 CKS2P33552 79 aa8.13□□□□□ -1.11
CHRNA1-202ENST00000348749 C10orf55Q5SWW7 151 aa8.13□□□□□ -1.11
CHRNA1-202ENST00000348749 RUSC1-AS1Q66K80 236 aa8.13□□□□□ -1.11
CHRNA1-202ENST00000348749 AMTNQ6UX39 209 aa8.13□□□□□ -1.11
CHRNA1-202ENST00000348749 ASCL5Q7RTU5 278 aa8.13□□□□□ -1.11
CHRNA1-202ENST00000348749 LYPD1Q8N2G4 141 aa8.13□□□□□ -1.11
CHRNA1-202ENST00000348749 SYT8Q8NBV8 401 aa8.13□□□□□ -1.11
CHRNA1-202ENST00000348749 TPPP3Q9BW30 176 aa8.13□□□□□ -1.11
CHRNA1-202ENST00000348749 A0A1W2PPI3 338 aa8.13□□□□□ -1.11
CHRNA1-202ENST00000348749 PRRG2O14669 202 aa8.13□□□□□ -1.11
CHRNA1-202ENST00000348749 CEACAM4O75871 244 aa8.13□□□□□ -1.11
CHRNA1-202ENST00000348749 TWIST1Q15672 202 aa8.13□□□□□ -1.11
CHRNA1-202ENST00000348749 DEFB108BQ8NET1 73 aa8.13□□□□□ -1.11
CHRNA1-202ENST00000348749 MAP1LC3AQ9H492 121 aa8.13□□□□□ -1.11
CHRNA1-202ENST00000348749 ZNRD1Q9P1U0 126 aa8.13□□□□□ -1.11
CHRNA1-202ENST00000348749 TRBV19A0A075B6N1 114 aa8.12□□□□□ -1.11
CHRNA1-202ENST00000348749 ZC2HC1BQ5TFG8 222 aa8.12□□□□□ -1.11
CHRNA1-202ENST00000348749 CFAP126Q5VTH2 177 aa8.12□□□□□ -1.11
CHRNA1-202ENST00000348749 Q6ZUT4 128 aa8.12□□□□□ -1.11
CHRNA1-202ENST00000348749 GTSCR1Q86UQ5 136 aa8.12□□□□□ -1.11
CHRNA1-202ENST00000348749 WFDC3Q8IUB2 231 aa8.12□□□□□ -1.11
CHRNA1-202ENST00000348749 NXT2Q9NPJ8 142 aaKnown RBP8.12□□□□□ -1.11
CHRNA1-202ENST00000348749 PGPEP1Q9NXJ5 209 aa8.12□□□□□ -1.11
CHRNA1-202ENST00000348749 TRBV7-3A0A075B6L6 115 aa8.11□□□□□ -1.11
CHRNA1-202ENST00000348749 K7EM74 188 aa8.11□□□□□ -1.11
CHRNA1-202ENST00000348749 MT-ATP8P03928 68 aa8.11□□□□□ -1.11
CHRNA1-202ENST00000348749 CD40P25942 277 aa8.11□□□□□ -1.11
CHRNA1-202ENST00000348749 TCF15Q12870 199 aa8.11□□□□□ -1.11
CHRNA1-202ENST00000348749 TMEM200BQ69YZ2 307 aa8.11□□□□□ -1.11
CHRNA1-202ENST00000348749 TMEM158Q8WZ71 300 aa8.11□□□□□ -1.11
CHRNA1-202ENST00000348749 VCX2Q9H322 139 aa8.11□□□□□ -1.11
CHRNA1-202ENST00000348749 PRSS1P07477 247 aa8.11□□□□□ -1.11
CHRNA1-202ENST00000348749 LEPP41159 167 aa8.11□□□□□ -1.11
CHRNA1-202ENST00000348749 IGFL3Q6UXB1 125 aa8.11□□□□□ -1.11
CHRNA1-202ENST00000348749 SIGLEC15Q6ZMC9 328 aa8.11□□□□□ -1.11
CHRNA1-202ENST00000348749 COX8CQ7Z4L0 72 aa8.11□□□□□ -1.11
CHRNA1-202ENST00000348749 MAPKAPK5-AS1Q8N8E1 139 aa8.11□□□□□ -1.11
CHRNA1-202ENST00000348749 RNF183Q96D59 192 aa8.11□□□□□ -1.11
CHRNA1-202ENST00000348749 SRSF8Q9BRL6 282 aaKnown RBP8.11□□□□□ -1.11
CHRNA1-202ENST00000348749 TMEM8BA6NDV4 472 aa8.1□□□□□ -1.11
CHRNA1-202ENST00000348749 C17orf100A8MU93 164 aa8.1□□□□□ -1.11
CHRNA1-202ENST00000348749 SMKR1H3BMG3 65 aa8.1□□□□□ -1.11
CHRNA1-202ENST00000348749 K7EMI3 77 aa8.1□□□□□ -1.11
CHRNA1-202ENST00000348749 TNFRSF13BO14836 293 aaPredicted RBP8.1□□□□□ -1.11
CHRNA1-202ENST00000348749 NDUFB3O43676 98 aa8.1□□□□□ -1.11
CHRNA1-202ENST00000348749 RPL27AP46776 148 aaKnown RBP8.1□□□□□ -1.11
CHRNA1-202ENST00000348749 SMCPP49901 116 aaPredicted RBP8.1□□□□□ -1.11
CHRNA1-202ENST00000348749 XGP55808 180 aa8.1□□□□□ -1.11
CHRNA1-202ENST00000348749 LYZP61626 148 aa8.1□□□□□ -1.11
CHRNA1-202ENST00000348749 IGF2-ASQ6U949 168 aa8.1□□□□□ -1.11
CHRNA1-202ENST00000348749 HIST1H4GQ99525 98 aa8.1□□□□□ -1.11
CHRNA1-202ENST00000348749 FOXC2Q99958 501 aa8.1□□□□□ -1.11
CHRNA1-202ENST00000348749 SCNM1Q9BWG6 230 aa8.1□□□□□ -1.11
CHRNA1-202ENST00000348749 NGBQ9NPG2 151 aa8.1□□□□□ -1.11
CHRNA1-202ENST00000348749 KAAG1Q9UBP8 84 aa8.1□□□□□ -1.11
CHRNA1-202ENST00000348749 ZDBF2Q9HCK1 2354 aa8.1□□□□□ -1.11
CHRNA1-202ENST00000348749 SH2D1AO60880 128 aa8.1□□□□□ -1.11
CHRNA1-202ENST00000348749 CRYGBP07316 175 aa8.1□□□□□ -1.11
CHRNA1-202ENST00000348749 FHL3Q13643 280 aa8.1□□□□□ -1.11
CHRNA1-202ENST00000348749 MRGPRG-AS1Q2M3A8 158 aa8.1□□□□□ -1.11
CHRNA1-202ENST00000348749 MORN3Q6PF18 240 aaPredicted RBP8.1□□□□□ -1.11
CHRNA1-202ENST00000348749 DLX4Q92988 240 aaPredicted RBP8.1□□□□□ -1.11
CHRNA1-202ENST00000348749 RNF185Q96GF1 192 aa8.1□□□□□ -1.11
CHRNA1-202ENST00000348749 C8orf49Q96NF6 230 aa8.1□□□□□ -1.11
CHRNA1-202ENST00000348749 FAM215AQ9Y5M1 114 aa8.1□□□□□ -1.11
CHRNA1-202ENST00000348749 TMEM178BH3BS89 294 aa8.09□□□□□ -1.11
CHRNA1-202ENST00000348749 CCL3L1P16619 93 aa8.09□□□□□ -1.11
CHRNA1-202ENST00000348749 DLX6P56179 175 aa8.09□□□□□ -1.11
CHRNA1-202ENST00000348749 GAGE5Q13069 117 aa8.09□□□□□ -1.11
CHRNA1-202ENST00000348749 GAGE6Q13070 117 aa8.09□□□□□ -1.11
CHRNA1-202ENST00000348749 HCP5Q6MZN7 132 aa8.09□□□□□ -1.11
CHRNA1-202ENST00000348749 NFE4Q86UQ8 179 aa8.09□□□□□ -1.11
CHRNA1-202ENST00000348749 H3BRN7 92 aa8.08□□□□□ -1.12
CHRNA1-202ENST00000348749 IGLC6P0CF74 106 aa8.08□□□□□ -1.12
CHRNA1-202ENST00000348749 GATA3P23771 443 aa8.08□□□□□ -1.12
CHRNA1-202ENST00000348749 TMEM155Q4W5P6 130 aa8.08□□□□□ -1.12
CHRNA1-202ENST00000348749 PPDPFLQ8WWR9 84 aa8.08□□□□□ -1.12
CHRNA1-202ENST00000348749 ASCL2Q99929 193 aa8.08□□□□□ -1.12
CHRNA1-202ENST00000348749 RNF5Q99942 180 aa8.08□□□□□ -1.12
CHRNA1-202ENST00000348749 SHANK2-AS3Q9BTD1 123 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms