RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 MT-ND6P03923 174 aa4.7□□□□□ -1.66
CLCN3-201ENST00000347613 CSN3P07498 182 aa4.7□□□□□ -1.66
CLCN3-201ENST00000347613 HES1Q14469 280 aa4.7□□□□□ -1.66
CLCN3-201ENST00000347613 RNF2Q99496 336 aa4.7□□□□□ -1.66
CLCN3-201ENST00000347613 VGLL1Q99990 258 aa4.7□□□□□ -1.66
CLCN3-201ENST00000347613 MSRB1Q9NZV6 116 aa4.7□□□□□ -1.66
CLCN3-201ENST00000347613 M0R2Z0 102 aa4.7□□□□□ -1.66
CLCN3-201ENST00000347613 CTSGP08311 255 aa4.7□□□□□ -1.66
CLCN3-201ENST00000347613 HTR1DP28221 377 aa4.7□□□□□ -1.66
CLCN3-201ENST00000347613 RBX1P62877 108 aa4.7□□□□□ -1.66
CLCN3-201ENST00000347613 Q8N6K4 173 aa4.7□□□□□ -1.66
CLCN3-201ENST00000347613 NPBQ8NG41 125 aa4.7□□□□□ -1.66
CLCN3-201ENST00000347613 RNF125Q96EQ8 232 aa4.7□□□□□ -1.66
CLCN3-201ENST00000347613 IGHV7-81A0A0B4J1V7 117 aa4.7□□□□□ -1.66
CLCN3-201ENST00000347613 G3V318 75 aa4.7□□□□□ -1.66
CLCN3-201ENST00000347613 P01737 135 aa4.7□□□□□ -1.66
CLCN3-201ENST00000347613 HIST1H1EP10412 219 aaKnown RBP4.7□□□□□ -1.66
CLCN3-201ENST00000347613 TCTAP57738 103 aa4.7□□□□□ -1.66
CLCN3-201ENST00000347613 C5orf64Q2M2E5 130 aa4.7□□□□□ -1.66
CLCN3-201ENST00000347613 FBXL19-AS1Q494R0 122 aa4.7□□□□□ -1.66
CLCN3-201ENST00000347613 RNF182Q8N6D2 247 aa4.7□□□□□ -1.66
CLCN3-201ENST00000347613 FMC1Q96HJ9 113 aa4.7□□□□□ -1.66
CLCN3-201ENST00000347613 DPM3Q9P2X0 92 aa4.7□□□□□ -1.66
CLCN3-201ENST00000347613 LINC00527Q9UJ94 153 aa4.7□□□□□ -1.66
CLCN3-201ENST00000347613 ZFYVE26Q68DK2 2539 aa4.69□□□□□ -1.66
CLCN3-201ENST00000347613 IGHV3OR16-10A0A075B7F0 116 aa4.69□□□□□ -1.66
CLCN3-201ENST00000347613 LOC102724200A0A096LPH7 203 aaPredicted RBP4.69□□□□□ -1.66
CLCN3-201ENST00000347613 IGHV3-49A0A0A0MS15 119 aa4.69□□□□□ -1.66
CLCN3-201ENST00000347613 NCBP2LA6PVI3 153 aaKnown RBP4.69□□□□□ -1.66
CLCN3-201ENST00000347613 SMKR1H3BMG3 65 aa4.69□□□□□ -1.66
CLCN3-201ENST00000347613 SPRY2O43597 315 aa4.69□□□□□ -1.66
CLCN3-201ENST00000347613 DEFB1P60022 68 aa4.69□□□□□ -1.66
CLCN3-201ENST00000347613 HBBP68871 147 aa4.69□□□□□ -1.66
CLCN3-201ENST00000347613 ERCC8Q13216 396 aa4.69□□□□□ -1.66
CLCN3-201ENST00000347613 OTORQ9NRC9 128 aa4.69□□□□□ -1.66
CLCN3-201ENST00000347613 TMEM14CQ9P0S9 112 aa4.69□□□□□ -1.66
CLCN3-201ENST00000347613 TIMM8BQ9Y5J9 83 aaPredicted RBP4.69□□□□□ -1.66
CLCN3-201ENST00000347613 LOC105371242A0A075B767 164 aa4.69□□□□□ -1.66
CLCN3-201ENST00000347613 H0Y8G0 127 aa4.69□□□□□ -1.66
CLCN3-201ENST00000347613 HLA-DRB1P01911 266 aa4.69□□□□□ -1.66
CLCN3-201ENST00000347613 COL8A1P27658 744 aa4.69□□□□□ -1.66
CLCN3-201ENST00000347613 ETFRF1Q6IPR1 90 aa4.69□□□□□ -1.66
CLCN3-201ENST00000347613 NEU4Q8WWR8 484 aaPredicted RBP4.69□□□□□ -1.66
CLCN3-201ENST00000347613 TPPP3Q9BW30 176 aa4.69□□□□□ -1.66
CLCN3-201ENST00000347613 PSG8Q9UQ74 426 aa4.69□□□□□ -1.66
CLCN3-201ENST00000347613 Q5PR19 223 aa4.68□□□□□ -1.66
CLCN3-201ENST00000347613 Q8N9W7 124 aa4.68□□□□□ -1.66
CLCN3-201ENST00000347613 CLPSL1A2RUU4 121 aa4.68□□□□□ -1.66
CLCN3-201ENST00000347613 TGFAP01135 160 aa4.68□□□□□ -1.66
CLCN3-201ENST00000347613 PRTN3P24158 256 aa4.68□□□□□ -1.66
CLCN3-201ENST00000347613 HINT1P49773 126 aaPredicted RBP4.68□□□□□ -1.66
CLCN3-201ENST00000347613 PSG3Q16557 428 aa4.68□□□□□ -1.66
CLCN3-201ENST00000347613 UNQ5815/PRO19632Q6UWF5 114 aa4.68□□□□□ -1.66
CLCN3-201ENST00000347613 RBPMS2Q6ZRY4 209 aaKnown RBP4.68□□□□□ -1.66
CLCN3-201ENST00000347613 SIRPDQ9H106 197 aa4.68□□□□□ -1.66
CLCN3-201ENST00000347613 HIF1ANQ9NWT6 349 aa4.68□□□□□ -1.66
CLCN3-201ENST00000347613 ZNF492Q9P255 531 aa4.68□□□□□ -1.66
CLCN3-201ENST00000347613 SNAI2O43623 268 aa4.68□□□□□ -1.66
CLCN3-201ENST00000347613 ZNF207O43670 478 aaKnown RBP4.68□□□□□ -1.66
CLCN3-201ENST00000347613 HSBP1O75506 76 aa4.68□□□□□ -1.66
CLCN3-201ENST00000347613 PPIFP30405 207 aaKnown RBP4.68□□□□□ -1.66
CLCN3-201ENST00000347613 C11orf21Q9P2W6 132 aa4.68□□□□□ -1.66
CLCN3-201ENST00000347613 NPIPB5A8MRT5 1133 aa4.67□□□□□ -1.66
CLCN3-201ENST00000347613 HAX1O00165 279 aa4.67□□□□□ -1.66
CLCN3-201ENST00000347613 IGF1P05019 195 aa4.67□□□□□ -1.66
CLCN3-201ENST00000347613 TSPOP30536 169 aa4.67□□□□□ -1.66
CLCN3-201ENST00000347613 IFI27P40305 119 aaPredicted RBP4.67□□□□□ -1.66
CLCN3-201ENST00000347613 RASL11AQ6T310 242 aa4.67□□□□□ -1.66
CLCN3-201ENST00000347613 LYZL1Q6UWQ5 148 aa4.67□□□□□ -1.66
CLCN3-201ENST00000347613 Q6ZN92 141 aa4.67□□□□□ -1.66
CLCN3-201ENST00000347613 Q6ZS46 218 aa4.67□□□□□ -1.66
CLCN3-201ENST00000347613 AMN1Q8IY45 258 aa4.67□□□□□ -1.66
CLCN3-201ENST00000347613 STXBP6Q8NFX7 210 aa4.67□□□□□ -1.66
CLCN3-201ENST00000347613 LOC389332A0A1B0GUA5 103 aa4.67□□□□□ -1.66
CLCN3-201ENST00000347613 A8MWL6 223 aa4.67□□□□□ -1.66
CLCN3-201ENST00000347613 TMEM238C9JI98 176 aa4.67□□□□□ -1.66
CLCN3-201ENST00000347613 LINC00614P0C842 121 aa4.67□□□□□ -1.66
CLCN3-201ENST00000347613 EDN2P20800 178 aa4.67□□□□□ -1.66
CLCN3-201ENST00000347613 PAX8Q06710 450 aa4.67□□□□□ -1.66
CLCN3-201ENST00000347613 LBHQ53QV2 105 aaPredicted RBP4.67□□□□□ -1.66
CLCN3-201ENST00000347613 ZNF562Q6V9R5 426 aa4.67□□□□□ -1.66
CLCN3-201ENST00000347613 TMEM219Q86XT9 240 aa4.67□□□□□ -1.66
CLCN3-201ENST00000347613 TTC9CQ8N5M4 171 aa4.67□□□□□ -1.66
CLCN3-201ENST00000347613 ARPC1AQ92747 370 aa4.67□□□□□ -1.66
CLCN3-201ENST00000347613 MYO18BQ8IUG5 2567 aa4.67□□□□□ -1.66
CLCN3-201ENST00000347613 USP24Q9UPU5 2620 aa4.67□□□□□ -1.66
CLCN3-201ENST00000347613 SYS1-DBNDD2H3BUS1 97 aa4.67□□□□□ -1.66
CLCN3-201ENST00000347613 GNG7O60262 68 aa4.67□□□□□ -1.66
CLCN3-201ENST00000347613 GATA1P15976 413 aaPredicted RBP4.67□□□□□ -1.66
CLCN3-201ENST00000347613 WFDC3Q8IUB2 231 aa4.67□□□□□ -1.66
CLCN3-201ENST00000347613 CCDC140Q96MF4 163 aa4.67□□□□□ -1.66
CLCN3-201ENST00000347613 PGPEP1Q9NXJ5 209 aa4.67□□□□□ -1.66
CLCN3-201ENST00000347613 EPG5Q9HCE0 2579 aa4.67□□□□□ -1.66
CLCN3-201ENST00000347613 ATP6V0E1O15342 81 aa4.66□□□□□ -1.66
CLCN3-201ENST00000347613 CRXO43186 299 aaPredicted RBP4.66□□□□□ -1.66
CLCN3-201ENST00000347613 DLEU1O43261 78 aa4.66□□□□□ -1.66
CLCN3-201ENST00000347613 SH2D1AO60880 128 aa4.66□□□□□ -1.66
CLCN3-201ENST00000347613 RPLP1P05386 114 aaKnown RBP4.66□□□□□ -1.66
CLCN3-201ENST00000347613 CLEC3BP05452 202 aa4.66□□□□□ -1.66
CLCN3-201ENST00000347613 DMRTA1Q5VZB9 504 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms