RNA–Protein interactions for RNA: ENST00000347547.6

LRP8-202, Transcript of LDL receptor related protein 8, humanhuman

TSL 1 (best) BASIC

Gene LRP8, Length 2,382 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP8-202ENST00000347547 SHANK2-AS3Q9BTD1 123 aa12.34□□□□□ -0.43
LRP8-202ENST00000347547 MRPL16Q9NX20 251 aaKnown RBP12.34□□□□□ -0.43
LRP8-202ENST00000347547 ATP5LO75964 103 aa12.34□□□□□ -0.43
LRP8-202ENST00000347547 MC5RP33032 325 aa12.34□□□□□ -0.43
LRP8-202ENST00000347547 RPL27AP46776 148 aaKnown RBP12.34□□□□□ -0.43
LRP8-202ENST00000347547 MAP1LC3AQ9H492 121 aa12.34□□□□□ -0.43
LRP8-202ENST00000347547 C16orf97H3BN30 126 aa12.33□□□□□ -0.44
LRP8-202ENST00000347547 DPM2O94777 84 aa12.33□□□□□ -0.44
LRP8-202ENST00000347547 CRYBA4P53673 196 aa12.33□□□□□ -0.44
LRP8-202ENST00000347547 ZNF48Q96MX3 618 aaPredicted RBP12.33□□□□□ -0.44
LRP8-202ENST00000347547 TTTY13Q9BZ97 58 aa12.33□□□□□ -0.44
LRP8-202ENST00000347547 A0A1B0GWB2 263 aa12.33□□□□□ -0.44
LRP8-202ENST00000347547 H3BRN7 92 aa12.33□□□□□ -0.44
LRP8-202ENST00000347547 SH2D1AO60880 128 aa12.33□□□□□ -0.44
LRP8-202ENST00000347547 RRN3P1Q2M238 152 aa12.33□□□□□ -0.44
LRP8-202ENST00000347547 LCNL1Q6ZST4 164 aa12.33□□□□□ -0.44
LRP8-202ENST00000347547 ATP6V0E2Q8NHE4 81 aa12.33□□□□□ -0.44
LRP8-202ENST00000347547 C8orf49Q96NF6 230 aa12.33□□□□□ -0.44
LRP8-202ENST00000347547 NXT2Q9NPJ8 142 aaKnown RBP12.33□□□□□ -0.44
LRP8-202ENST00000347547 LINC01619G3V211 115 aa12.32□□□□□ -0.44
LRP8-202ENST00000347547 TNFAIP6P98066 277 aaPredicted RBP12.32□□□□□ -0.44
LRP8-202ENST00000347547 DIAPH2-AS1Q14236 149 aa12.32□□□□□ -0.44
LRP8-202ENST00000347547 RAI1Q7Z5J4 1906 aaPredicted RBP12.32□□□□□ -0.44
LRP8-202ENST00000347547 WFDC3Q8IUB2 231 aa12.32□□□□□ -0.44
LRP8-202ENST00000347547 TMEM133Q9H2Q1 129 aa12.32□□□□□ -0.44
LRP8-202ENST00000347547 SMKR1H3BMG3 65 aa12.32□□□□□ -0.44
LRP8-202ENST00000347547 MRPS12O15235 138 aaKnown RBP12.32□□□□□ -0.44
LRP8-202ENST00000347547 CEACAM4O75871 244 aa12.32□□□□□ -0.44
LRP8-202ENST00000347547 C17orf77Q96MU5 243 aa12.32□□□□□ -0.44
LRP8-202ENST00000347547 ASCL2Q99929 193 aa12.32□□□□□ -0.44
LRP8-202ENST00000347547 GEMIN7Q9H840 131 aaKnown RBP12.32□□□□□ -0.44
LRP8-202ENST00000347547 NAV3Q8IVL0 2385 aa12.31□□□□□ -0.44
LRP8-202ENST00000347547 IGHV3-21A0A0B4J1V1 117 aa12.31□□□□□ -0.44
LRP8-202ENST00000347547 CRYGBP07316 175 aa12.31□□□□□ -0.44
LRP8-202ENST00000347547 LEPP41159 167 aa12.31□□□□□ -0.44
LRP8-202ENST00000347547 TWIST1Q15672 202 aa12.31□□□□□ -0.44
LRP8-202ENST00000347547 C3orf36Q3SXR2 165 aa12.31□□□□□ -0.44
LRP8-202ENST00000347547 DSPP15924 2871 aaKnown RBP12.31□□□□□ -0.44
LRP8-202ENST00000347547 IGHV1-46P01743 117 aa12.3□□□□□ -0.44
LRP8-202ENST00000347547 CCL3L1P16619 93 aa12.3□□□□□ -0.44
LRP8-202ENST00000347547 ZC2HC1BQ5TFG8 222 aa12.3□□□□□ -0.44
LRP8-202ENST00000347547 GTSCR1Q86UQ5 136 aa12.3□□□□□ -0.44
LRP8-202ENST00000347547 DEFB124Q8NES8 71 aa12.3□□□□□ -0.44
LRP8-202ENST00000347547 ZNF418Q8TF45 676 aaPredicted RBP12.3□□□□□ -0.44
LRP8-202ENST00000347547 RASL11BQ9BPW5 248 aa12.3□□□□□ -0.44
LRP8-202ENST00000347547 PRSS1P07477 247 aa12.3□□□□□ -0.44
LRP8-202ENST00000347547 IGLC6P0CF74 106 aa12.3□□□□□ -0.44
LRP8-202ENST00000347547 PDE6HQ13956 83 aa12.3□□□□□ -0.44
LRP8-202ENST00000347547 RNF185Q96GF1 192 aa12.3□□□□□ -0.44
LRP8-202ENST00000347547 I3L2K1 104 aa12.29□□□□□ -0.44
LRP8-202ENST00000347547 IGKV1-17P01599 117 aa12.29□□□□□ -0.44
LRP8-202ENST00000347547 SRSF2Q01130 221 aaKnown RBP12.29□□□□□ -0.44
LRP8-202ENST00000347547 KLRD1Q13241 179 aa12.29□□□□□ -0.44
LRP8-202ENST00000347547 PLGLAQ15195 96 aa12.29□□□□□ -0.44
LRP8-202ENST00000347547 TMEM200BQ69YZ2 307 aa12.29□□□□□ -0.44
LRP8-202ENST00000347547 WT1P19544 449 aaPredicted RBP12.29□□□□□ -0.44
LRP8-202ENST00000347547 INSL3P51460 131 aa12.29□□□□□ -0.44
LRP8-202ENST00000347547 ATP5G2Q06055 141 aa12.29□□□□□ -0.44
LRP8-202ENST00000347547 C8orf86Q6ZUL3 223 aa12.29□□□□□ -0.44
LRP8-202ENST00000347547 CNFNQ9BYD5 112 aa12.29□□□□□ -0.44
LRP8-202ENST00000347547 PROCRQ9UNN8 238 aa12.29□□□□□ -0.44
LRP8-202ENST00000347547 HEATR1Q9H583 2144 aaKnown RBP12.29□□□□□ -0.44
LRP8-202ENST00000347547 MUC6Q6W4X9 2439 aa12.28□□□□□ -0.44
LRP8-202ENST00000347547 TMSB15BA0A087X1C1 80 aa12.28□□□□□ -0.44
LRP8-202ENST00000347547 TMEM8BA6NDV4 472 aa12.28□□□□□ -0.44
LRP8-202ENST00000347547 TEX22C9J3V5 150 aa12.28□□□□□ -0.44
LRP8-202ENST00000347547 FOXC2Q99958 501 aa12.28□□□□□ -0.44
LRP8-202ENST00000347547 C1QTNF4Q9BXJ3 329 aa12.28□□□□□ -0.44
LRP8-202ENST00000347547 CYSLTR1Q9Y271 337 aa12.28□□□□□ -0.44
LRP8-202ENST00000347547 M0R1B8 84 aa12.28□□□□□ -0.44
LRP8-202ENST00000347547 FOXI1Q12951 378 aa12.28□□□□□ -0.44
LRP8-202ENST00000347547 CDIP1Q9H305 208 aa12.28□□□□□ -0.44
LRP8-202ENST00000347547 LOC400499M0QZD8 3231 aa12.28□□□□□ -0.44
LRP8-202ENST00000347547 TRBV7-3A0A075B6L6 115 aa12.27□□□□□ -0.44
LRP8-202ENST00000347547 PRRG2O14669 202 aa12.27□□□□□ -0.44
LRP8-202ENST00000347547 APOMO95445 188 aa12.27□□□□□ -0.44
LRP8-202ENST00000347547 NBL1P41271 181 aa12.27□□□□□ -0.44
LRP8-202ENST00000347547 AMTNQ6UX39 209 aa12.27□□□□□ -0.44
LRP8-202ENST00000347547 MAPKAPK5-AS1Q8N8E1 139 aa12.27□□□□□ -0.44
LRP8-202ENST00000347547 M0R3E3 92 aa12.27□□□□□ -0.45
LRP8-202ENST00000347547 TSPAN13O95857 204 aa12.27□□□□□ -0.45
LRP8-202ENST00000347547 TMEM158Q8WZ71 300 aa12.27□□□□□ -0.45
LRP8-202ENST00000347547 TNFRSF6BO95407 300 aa12.26□□□□□ -0.45
LRP8-202ENST00000347547 C20orf78Q9BR46 151 aa12.26□□□□□ -0.45
LRP8-202ENST00000347547 AAMDCQ9H7C9 122 aa12.26□□□□□ -0.45
LRP8-202ENST00000347547 SIGLEC9Q9Y336 463 aa12.26□□□□□ -0.45
LRP8-202ENST00000347547 RBP4P02753 201 aa12.26□□□□□ -0.45
LRP8-202ENST00000347547 EGR2P11161 476 aaPredicted RBP12.26□□□□□ -0.45
LRP8-202ENST00000347547 PSMG3-AS1Q96PY0 264 aa12.26□□□□□ -0.45
LRP8-202ENST00000347547 K7EMI3 77 aa12.25□□□□□ -0.45
LRP8-202ENST00000347547 FCN3O75636 299 aa12.25□□□□□ -0.45
LRP8-202ENST00000347547 Q8N8P6 123 aa12.25□□□□□ -0.45
LRP8-202ENST00000347547 HIST1H4GQ99525 98 aa12.25□□□□□ -0.45
LRP8-202ENST00000347547 CNOT1A5YKK6 2376 aaKnown RBP12.25□□□□□ -0.45
LRP8-202ENST00000347547 ENSAO43768 121 aaKnown RBP12.25□□□□□ -0.45
LRP8-202ENST00000347547 CD40P25942 277 aa12.25□□□□□ -0.45
LRP8-202ENST00000347547 C5orf64Q2M2E5 130 aa12.25□□□□□ -0.45
LRP8-202ENST00000347547 CFAP126Q5VTH2 177 aa12.25□□□□□ -0.45
LRP8-202ENST00000347547 ZNF575Q86XF7 245 aa12.25□□□□□ -0.45
LRP8-202ENST00000347547 ZNF491Q8N8L2 437 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms