RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 A0A0G2JRQ6 117 aa18.54■□□□□ 0.56
NPAS3-201ENST00000346562 CT83Q5H943 113 aa18.54■□□□□ 0.56
NPAS3-201ENST00000346562 LYL1P12980 280 aa18.54■□□□□ 0.56
NPAS3-201ENST00000346562 RNF144BQ7Z419 303 aa18.54■□□□□ 0.56
NPAS3-201ENST00000346562 G3V318 75 aa18.54■□□□□ 0.56
NPAS3-201ENST00000346562 FAM231BA6NCW3 169 aa18.54■□□□□ 0.56
NPAS3-201ENST00000346562 TMEM256Q8N2U0 113 aa18.53■□□□□ 0.56
NPAS3-201ENST00000346562 TRBV19A0A075B6N1 114 aa18.53■□□□□ 0.56
NPAS3-201ENST00000346562 LHBP01229 141 aa18.53■□□□□ 0.56
NPAS3-201ENST00000346562 GAGE6Q13070 117 aa18.53■□□□□ 0.56
NPAS3-201ENST00000346562 PFN2P35080 140 aa18.53■□□□□ 0.56
NPAS3-201ENST00000346562 ZNRF2Q8NHG8 242 aa18.53■□□□□ 0.56
NPAS3-201ENST00000346562 ZNRD1Q9P1U0 126 aa18.52■□□□□ 0.56
NPAS3-201ENST00000346562 LMO1P25800 156 aa18.52■□□□□ 0.56
NPAS3-201ENST00000346562 TRPM7Q96QT4 1865 aa18.52■□□□□ 0.56
NPAS3-201ENST00000346562 C2orf66Q6UXQ4 117 aa18.52■□□□□ 0.55
NPAS3-201ENST00000346562 TMEM213A2RRL7 107 aa18.52■□□□□ 0.55
NPAS3-201ENST00000346562 LURAP1LQ8IV03 231 aa18.52■□□□□ 0.55
NPAS3-201ENST00000346562 KLF5Q13887 457 aaPredicted RBP18.51■□□□□ 0.55
NPAS3-201ENST00000346562 LCTP09848 1927 aa18.51■□□□□ 0.55
NPAS3-201ENST00000346562 C9JAW5 83 aa18.51■□□□□ 0.55
NPAS3-201ENST00000346562 TPRP12270 2363 aaKnown RBP18.51■□□□□ 0.55
NPAS3-201ENST00000346562 INAFM2P0DMQ5 153 aa18.5■□□□□ 0.55
NPAS3-201ENST00000346562 Q71RC1 249 aaPredicted RBP18.5■□□□□ 0.55
NPAS3-201ENST00000346562 LINC00311Q8N616 119 aa18.5■□□□□ 0.55
NPAS3-201ENST00000346562 MMP23AO75900 390 aa18.5■□□□□ 0.55
NPAS3-201ENST00000346562 ELANEP08246 267 aa18.5■□□□□ 0.55
NPAS3-201ENST00000346562 TEX36Q5VZQ5 186 aa18.5■□□□□ 0.55
NPAS3-201ENST00000346562 CABIN1Q9Y6J0 2220 aa18.5■□□□□ 0.55
NPAS3-201ENST00000346562 H3BRN7 92 aa18.49■□□□□ 0.55
NPAS3-201ENST00000346562 C22orf46C9J442 243 aa18.49■□□□□ 0.55
NPAS3-201ENST00000346562 MPV17L2Q567V2 206 aa18.49■□□□□ 0.55
NPAS3-201ENST00000346562 FAM104BQ5XKR9 115 aa18.49■□□□□ 0.55
NPAS3-201ENST00000346562 MRPL52Q86TS9 123 aaKnown RBP18.49■□□□□ 0.55
NPAS3-201ENST00000346562 Q6ZRM9 215 aa18.49■□□□□ 0.55
NPAS3-201ENST00000346562 PKIGQ9Y2B9 76 aa18.48■□□□□ 0.55
NPAS3-201ENST00000346562 XIRP1Q702N8 1843 aaKnown RBP18.48■□□□□ 0.55
NPAS3-201ENST00000346562 THADAQ6YHU6 1953 aa18.48■□□□□ 0.55
NPAS3-201ENST00000346562 SLAQ13239 276 aa18.48■□□□□ 0.55
NPAS3-201ENST00000346562 LINC00479Q96M42 142 aa18.48■□□□□ 0.55
NPAS3-201ENST00000346562 ANXA2RQ3ZCQ2 193 aa18.48■□□□□ 0.55
NPAS3-201ENST00000346562 REG4Q9BYZ8 158 aa18.48■□□□□ 0.55
NPAS3-201ENST00000346562 LOXP28300 417 aaPredicted RBP18.48■□□□□ 0.55
NPAS3-201ENST00000346562 SRSF2Q01130 221 aaKnown RBP18.48■□□□□ 0.55
NPAS3-201ENST00000346562 TMEM14CQ9P0S9 112 aa18.47■□□□□ 0.55
NPAS3-201ENST00000346562 H3BUA1 57 aa18.47■□□□□ 0.55
NPAS3-201ENST00000346562 TRAV12-2A0A075B6T6 113 aa18.47■□□□□ 0.55
NPAS3-201ENST00000346562 C17orf58Q2M2W7 97 aa18.47■□□□□ 0.55
NPAS3-201ENST00000346562 SDHAF1A6NFY7 115 aa18.47■□□□□ 0.55
NPAS3-201ENST00000346562 UBE2WQ96B02 151 aa18.47■□□□□ 0.55
NPAS3-201ENST00000346562 HLA-DRB4P13762 266 aa18.47■□□□□ 0.55
NPAS3-201ENST00000346562 HLA-DRB4X5D2U9 266 aa18.47■□□□□ 0.55
NPAS3-201ENST00000346562 IGHV7-4-1A0A0J9YVY3 117 aa18.46■□□□□ 0.55
NPAS3-201ENST00000346562 PRSS29PA6NIE9 313 aa18.46■□□□□ 0.55
NPAS3-201ENST00000346562 SVILO95425 2214 aa18.46■□□□□ 0.55
NPAS3-201ENST00000346562 ZNF134P52741 427 aa18.46■□□□□ 0.55
NPAS3-201ENST00000346562 IGHV3-38A0A0C4DH36 116 aa18.46■□□□□ 0.55
NPAS3-201ENST00000346562 IGF2BP2-AS1Q96M15 143 aa18.46■□□□□ 0.55
NPAS3-201ENST00000346562 TSSC4Q9Y5U2 329 aaPredicted RBP18.45■□□□□ 0.54
NPAS3-201ENST00000346562 TRAV25A0A0B4J276 109 aa18.45■□□□□ 0.54
NPAS3-201ENST00000346562 SEC16AO15027 2179 aa18.45■□□□□ 0.54
NPAS3-201ENST00000346562 SCRT2Q9NQ03 307 aa18.45■□□□□ 0.54
NPAS3-201ENST00000346562 CD5LO43866 347 aa18.44■□□□□ 0.54
NPAS3-201ENST00000346562 IGHV1-24A0A0C4DH33 117 aa18.44■□□□□ 0.54
NPAS3-201ENST00000346562 Q0VG73 95 aa18.44■□□□□ 0.54
NPAS3-201ENST00000346562 ASXL3Q9C0F0 2248 aa18.44■□□□□ 0.54
NPAS3-201ENST00000346562 NXPH4O95158 308 aa18.43■□□□□ 0.54
NPAS3-201ENST00000346562 DOCK3Q8IZD9 2030 aa18.43■□□□□ 0.54
NPAS3-201ENST00000346562 TCF15Q12870 199 aa18.43■□□□□ 0.54
NPAS3-201ENST00000346562 IGKV1-6A0A0C4DH72 117 aa18.43■□□□□ 0.54
NPAS3-201ENST00000346562 HERVK_113P63121 156 aa18.43■□□□□ 0.54
NPAS3-201ENST00000346562 TAL2Q16559 108 aa18.43■□□□□ 0.54
NPAS3-201ENST00000346562 Q6ZR03 302 aa18.43■□□□□ 0.54
NPAS3-201ENST00000346562 ANGP03950 147 aaKnown RBP18.43■□□□□ 0.54
NPAS3-201ENST00000346562 ABCA7Q8IZY2 2146 aa18.43■□□□□ 0.54
NPAS3-201ENST00000346562 GREB1Q4ZG55 1949 aa18.42■□□□□ 0.54
NPAS3-201ENST00000346562 RALGAPA1Q6GYQ0 2036 aa18.42■□□□□ 0.54
NPAS3-201ENST00000346562 CRLF1O75462 422 aa18.42■□□□□ 0.54
NPAS3-201ENST00000346562 OR11H6Q8NGC7 330 aa18.42■□□□□ 0.54
NPAS3-201ENST00000346562 UBL5Q9BZL1 73 aa18.42■□□□□ 0.54
NPAS3-201ENST00000346562 STPG4Q8N801 248 aa18.42■□□□□ 0.54
NPAS3-201ENST00000346562 PRR25Q96S07 402 aa18.41■□□□□ 0.54
NPAS3-201ENST00000346562 CFPP27918 469 aa18.41■□□□□ 0.54
NPAS3-201ENST00000346562 RHOHQ15669 191 aa18.41■□□□□ 0.54
NPAS3-201ENST00000346562 ADAMTSL5Q6ZMM2 481 aa18.41■□□□□ 0.54
NPAS3-201ENST00000346562 DSCR8Q96T75 97 aa18.4■□□□□ 0.54
NPAS3-201ENST00000346562 ATP6V0BQ99437 205 aa18.4■□□□□ 0.54
NPAS3-201ENST00000346562 TRAV26-2A0A0B4J265 109 aa18.4■□□□□ 0.54
NPAS3-201ENST00000346562 MRPL51Q4U2R6 128 aaKnown RBP18.4■□□□□ 0.54
NPAS3-201ENST00000346562 FOXI2Q6ZQN5 318 aa18.4■□□□□ 0.54
NPAS3-201ENST00000346562 FAM120AOSQ5T036 256 aa18.4■□□□□ 0.54
NPAS3-201ENST00000346562 TRAV13-2A0A0B4J235 113 aa18.4■□□□□ 0.54
NPAS3-201ENST00000346562 UBE2BP63146 152 aa18.4■□□□□ 0.54
NPAS3-201ENST00000346562 MDC1Q14676 2089 aaKnown RBP18.39■□□□□ 0.54
NPAS3-201ENST00000346562 ETV2O00321 342 aaPredicted RBP18.39■□□□□ 0.53
NPAS3-201ENST00000346562 SCN5AQ14524 2016 aa18.39■□□□□ 0.53
NPAS3-201ENST00000346562 A0A096LPF7 62 aa18.39■□□□□ 0.53
NPAS3-201ENST00000346562 APC2O95996 2303 aa18.39■□□□□ 0.53
NPAS3-201ENST00000346562 TRBV20-1A0A075B6N2 111 aa18.39■□□□□ 0.53
NPAS3-201ENST00000346562 PLA2G2CQ5R387 149 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms