RNA–Protein interactions for RNA: ENST00000345662.5

SPAST-202, Transcript of spastin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SPAST, Length 5,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-202ENST00000345662 TRAV41A0A0B4J266 112 aa14.08□□□□□ -0.16
SPAST-202ENST00000345662 WNK2Q9Y3S1 2297 aa14.07□□□□□ -0.16
SPAST-202ENST00000345662 SRD5A1P18405 259 aa14.07□□□□□ -0.16
SPAST-202ENST00000345662 ERCC8Q13216 396 aa14.07□□□□□ -0.16
SPAST-202ENST00000345662 GAGE2AQ6NT46 116 aa14.07□□□□□ -0.16
SPAST-202ENST00000345662 SPXQ9BT56 116 aa14.07□□□□□ -0.16
SPAST-202ENST00000345662 LY6G5BQ8NDX9 201 aa14.07□□□□□ -0.16
SPAST-202ENST00000345662 OR11H6Q8NGC7 330 aa14.07□□□□□ -0.16
SPAST-202ENST00000345662 OOSP1A8MZH6 123 aa14.07□□□□□ -0.16
SPAST-202ENST00000345662 PRR20EP86478 221 aa14.07□□□□□ -0.16
SPAST-202ENST00000345662 PRR20CP86479 221 aa14.07□□□□□ -0.16
SPAST-202ENST00000345662 PRR20DP86480 221 aa14.07□□□□□ -0.16
SPAST-202ENST00000345662 PRR20BP86481 221 aa14.07□□□□□ -0.16
SPAST-202ENST00000345662 PRR20AP86496 221 aa14.07□□□□□ -0.16
SPAST-202ENST00000345662 ZNF747Q9BV97 191 aa14.07□□□□□ -0.16
SPAST-202ENST00000345662 MRPL35Q9NZE8 188 aaKnown RBP14.07□□□□□ -0.16
SPAST-202ENST00000345662 PEMTQ9UBM1 199 aa14.06□□□□□ -0.16
SPAST-202ENST00000345662 SCN5AQ14524 2016 aa14.06□□□□□ -0.16
SPAST-202ENST00000345662 AMTNQ6UX39 209 aa14.06□□□□□ -0.16
SPAST-202ENST00000345662 RNF166Q96A37 237 aaPredicted RBP14.06□□□□□ -0.16
SPAST-202ENST00000345662 ZNF688P0C7X2 276 aa14.06□□□□□ -0.16
SPAST-202ENST00000345662 TCF15Q12870 199 aa14.06□□□□□ -0.16
SPAST-202ENST00000345662 ROS1P08922 2347 aa14.06□□□□□ -0.16
SPAST-202ENST00000345662 C7orf69Q9H7B7 122 aa14.05□□□□□ -0.16
SPAST-202ENST00000345662 ABCA1O95477 2261 aa14.05□□□□□ -0.16
SPAST-202ENST00000345662 MALP21145 153 aa14.05□□□□□ -0.16
SPAST-202ENST00000345662 CITED1Q99966 193 aa14.05□□□□□ -0.16
SPAST-202ENST00000345662 TP53TG1Q9Y2A0 90 aa14.05□□□□□ -0.16
SPAST-202ENST00000345662 TRBV7-1A0A0A6YYK4 115 aa14.05□□□□□ -0.16
SPAST-202ENST00000345662 NDPQ00604 133 aa14.05□□□□□ -0.16
SPAST-202ENST00000345662 PAX4O43316 350 aa14.05□□□□□ -0.16
SPAST-202ENST00000345662 NPYP01303 97 aa14.05□□□□□ -0.16
SPAST-202ENST00000345662 SPANXDQ9BXN6 97 aa14.05□□□□□ -0.16
SPAST-202ENST00000345662 DOCK8Q8NF50 2099 aa14.04□□□□□ -0.16
SPAST-202ENST00000345662 CCL19Q99731 98 aa14.04□□□□□ -0.16
SPAST-202ENST00000345662 LINC00527Q9UJ94 153 aa14.04□□□□□ -0.16
SPAST-202ENST00000345662 TCF20Q9UGU0 1960 aaKnown RBP14.04□□□□□ -0.16
SPAST-202ENST00000345662 C12orf74Q32Q52 190 aa14.04□□□□□ -0.16
SPAST-202ENST00000345662 ASPHD1Q5U4P2 390 aa14.04□□□□□ -0.16
SPAST-202ENST00000345662 FXYD5Q96DB9 178 aa14.04□□□□□ -0.16
SPAST-202ENST00000345662 TMEM141Q96I45 108 aa14.04□□□□□ -0.16
SPAST-202ENST00000345662 PRADC1Q9BSG0 188 aa14.04□□□□□ -0.16
SPAST-202ENST00000345662 C1QTNF4Q9BXJ3 329 aa14.04□□□□□ -0.16
SPAST-202ENST00000345662 TRIOBPQ9H2D6 2365 aa14.04□□□□□ -0.16
SPAST-202ENST00000345662 LEPROTO15243 131 aa14.04□□□□□ -0.16
SPAST-202ENST00000345662 NDUFS7O75251 213 aa14.04□□□□□ -0.16
SPAST-202ENST00000345662 TMEM14CQ9P0S9 112 aa14.04□□□□□ -0.16
SPAST-202ENST00000345662 F8VRH5 84 aa14.03□□□□□ -0.16
SPAST-202ENST00000345662 PMVKQ15126 192 aa14.03□□□□□ -0.16
SPAST-202ENST00000345662 MINOS1Q5TGZ0 78 aa14.03□□□□□ -0.16
SPAST-202ENST00000345662 FAM168AQ92567 244 aa14.03□□□□□ -0.16
SPAST-202ENST00000345662 PRO1854Q9UHT4 67 aa14.03□□□□□ -0.16
SPAST-202ENST00000345662 MINOS1-NBL1R4GNA1 71 aa14.03□□□□□ -0.16
SPAST-202ENST00000345662 ZNRD1Q9P1U0 126 aa14.03□□□□□ -0.16
SPAST-202ENST00000345662 ZNF672Q499Z4 452 aaPredicted RBP14.03□□□□□ -0.16
SPAST-202ENST00000345662 DKK2Q9UBU2 259 aa14.03□□□□□ -0.16
SPAST-202ENST00000345662 A0A087WWL8 130 aa14.03□□□□□ -0.16
SPAST-202ENST00000345662 THBDP07204 575 aa14.03□□□□□ -0.16
SPAST-202ENST00000345662 INAFM2P0DMQ5 153 aa14.03□□□□□ -0.16
SPAST-202ENST00000345662 FGF6P10767 208 aa14.03□□□□□ -0.16
SPAST-202ENST00000345662 HLA-DRB4P13762 266 aa14.03□□□□□ -0.16
SPAST-202ENST00000345662 VMO1Q7Z5L0 202 aa14.03□□□□□ -0.16
SPAST-202ENST00000345662 HLA-DRB4X5D2U9 266 aa14.03□□□□□ -0.16
SPAST-202ENST00000345662 HEATR1Q9H583 2144 aaKnown RBP14.03□□□□□ -0.16
SPAST-202ENST00000345662 IGHV3-73A0A0B4J1V6 119 aa14.02□□□□□ -0.16
SPAST-202ENST00000345662 STHQ8IWL8 128 aa14.02□□□□□ -0.16
SPAST-202ENST00000345662 PRR25Q96S07 402 aa14.02□□□□□ -0.16
SPAST-202ENST00000345662 RLFQ13129 1914 aa14.02□□□□□ -0.16
SPAST-202ENST00000345662 WDR86Q86TI4 376 aa14.02□□□□□ -0.16
SPAST-202ENST00000345662 ZC2HC1AQ96GY0 325 aa14.02□□□□□ -0.16
SPAST-202ENST00000345662 GAGE12JA6NER3 117 aa14.02□□□□□ -0.17
SPAST-202ENST00000345662 GAGE7O76087 117 aa14.02□□□□□ -0.17
SPAST-202ENST00000345662 GAGE12FP0CL80 117 aa14.02□□□□□ -0.17
SPAST-202ENST00000345662 GAGE12GP0CL81 117 aa14.02□□□□□ -0.17
SPAST-202ENST00000345662 GAGE12IP0CL82 117 aa14.02□□□□□ -0.17
SPAST-202ENST00000345662 GAGE4Q13068 117 aa14.02□□□□□ -0.17
SPAST-202ENST00000345662 KLRD1Q13241 179 aa14.02□□□□□ -0.17
SPAST-202ENST00000345662 TEX48A0A1B0GUV7 120 aa14.01□□□□□ -0.17
SPAST-202ENST00000345662 MDS2Q8NDY4 140 aa14.01□□□□□ -0.17
SPAST-202ENST00000345662 CHCHD5Q9BSY4 110 aa14.01□□□□□ -0.17
SPAST-202ENST00000345662 PLXNA4Q9HCM2 1894 aa14.01□□□□□ -0.17
SPAST-202ENST00000345662 SAP30O75446 220 aa14.01□□□□□ -0.17
SPAST-202ENST00000345662 PRIMA1Q86XR5 153 aa14.01□□□□□ -0.17
SPAST-202ENST00000345662 INTS1Q8N201 2190 aaKnown RBP14□□□□□ -0.17
SPAST-202ENST00000345662 WDR81Q562E7 1941 aa14□□□□□ -0.17
SPAST-202ENST00000345662 LTAP01374 205 aa14□□□□□ -0.17
SPAST-202ENST00000345662 DNAJC30Q96LL9 226 aa14□□□□□ -0.17
SPAST-202ENST00000345662 WDR90Q96KV7 1748 aa14□□□□□ -0.17
SPAST-202ENST00000345662 ZNF833PQ6ZTB9 187 aa14□□□□□ -0.17
SPAST-202ENST00000345662 Q8NFD4 153 aa14□□□□□ -0.17
SPAST-202ENST00000345662 PHLDA1Q8WV24 401 aaPredicted RBP14□□□□□ -0.17
SPAST-202ENST00000345662 COLQQ9Y215 455 aaPredicted RBP14□□□□□ -0.17
SPAST-202ENST00000345662 TRGV4A0A0C4DH28 118 aa14□□□□□ -0.17
SPAST-202ENST00000345662 C15orf65H3BRN8 121 aa14□□□□□ -0.17
SPAST-202ENST00000345662 WT1-ASQ06250 92 aa14□□□□□ -0.17
SPAST-202ENST00000345662 FCN3O75636 299 aa14□□□□□ -0.17
SPAST-202ENST00000345662 CNOT1A5YKK6 2376 aaKnown RBP14□□□□□ -0.17
SPAST-202ENST00000345662 NDUFB8O95169 186 aa13.99□□□□□ -0.17
SPAST-202ENST00000345662 GAGE5Q13069 117 aa13.99□□□□□ -0.17
SPAST-202ENST00000345662 GAGE6Q13070 117 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms