RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 HLA-DRB4P13762 266 aa8.74□□□□□ -1.01
SNCA-202ENST00000345009 ZNF124Q15973 351 aa8.74□□□□□ -1.01
SNCA-202ENST00000345009 FAM74A1Q5RGS3 127 aa8.74□□□□□ -1.01
SNCA-202ENST00000345009 Q6ZWC4 215 aa8.74□□□□□ -1.01
SNCA-202ENST00000345009 SLC51BQ86UW2 128 aa8.74□□□□□ -1.01
SNCA-202ENST00000345009 LYPD1Q8N2G4 141 aa8.74□□□□□ -1.01
SNCA-202ENST00000345009 RPP25LQ8N5L8 163 aaKnown RBP8.74□□□□□ -1.01
SNCA-202ENST00000345009 STOML3Q8TAV4 291 aa8.74□□□□□ -1.01
SNCA-202ENST00000345009 SAT2Q96F10 170 aaPredicted RBP8.74□□□□□ -1.01
SNCA-202ENST00000345009 C17orf77Q96MU5 243 aa8.74□□□□□ -1.01
SNCA-202ENST00000345009 C1QTNF4Q9BXJ3 329 aa8.74□□□□□ -1.01
SNCA-202ENST00000345009 PPP1R14DQ9NXH3 145 aa8.74□□□□□ -1.01
SNCA-202ENST00000345009 HLA-DRB4X5D2U9 266 aa8.74□□□□□ -1.01
SNCA-202ENST00000345009 CTXND1A0A1B0GTU2 59 aa8.73□□□□□ -1.01
SNCA-202ENST00000345009 H3BMM0 161 aa8.73□□□□□ -1.01
SNCA-202ENST00000345009 H3BTX0 84 aa8.73□□□□□ -1.01
SNCA-202ENST00000345009 SNRPCP09234 159 aaKnown RBP8.73□□□□□ -1.01
SNCA-202ENST00000345009 OR10J4P0C629 311 aa8.73□□□□□ -1.01
SNCA-202ENST00000345009 CSN1S1P47710 185 aa8.73□□□□□ -1.01
SNCA-202ENST00000345009 IGFL4Q6B9Z1 124 aa8.73□□□□□ -1.01
SNCA-202ENST00000345009 TRPT1Q86TN4 253 aaKnown RBP8.73□□□□□ -1.01
SNCA-202ENST00000345009 RNF182Q8N6D2 247 aa8.73□□□□□ -1.01
SNCA-202ENST00000345009 OR4B1Q8NGF8 309 aa8.73□□□□□ -1.01
SNCA-202ENST00000345009 OR10J6PQ8NGY7 276 aa8.73□□□□□ -1.01
SNCA-202ENST00000345009 RPUSD4Q96CM3 377 aaKnown RBP8.73□□□□□ -1.01
SNCA-202ENST00000345009 FXYD5Q96DB9 178 aa8.73□□□□□ -1.01
SNCA-202ENST00000345009 MRPL53Q96EL3 112 aaKnown RBP8.73□□□□□ -1.01
SNCA-202ENST00000345009 CLUHP3Q96NS8 147 aa8.73□□□□□ -1.01
SNCA-202ENST00000345009 A0A0J9YX75 114 aa8.72□□□□□ -1.01
SNCA-202ENST00000345009 STAG3L2P0CL84 134 aa8.72□□□□□ -1.01
SNCA-202ENST00000345009 STAG3L3P0CL85 134 aa8.72□□□□□ -1.01
SNCA-202ENST00000345009 RAB5CP51148 216 aa8.72□□□□□ -1.01
SNCA-202ENST00000345009 RANP62826 216 aaKnown RBP8.72□□□□□ -1.01
SNCA-202ENST00000345009 DPPA3Q6W0C5 159 aa8.72□□□□□ -1.01
SNCA-202ENST00000345009 C20orf173Q96LM9 149 aa8.72□□□□□ -1.01
SNCA-202ENST00000345009 TMEM167BQ9NRX6 74 aa8.72□□□□□ -1.01
SNCA-202ENST00000345009 AGRNO00468 2067 aa8.72□□□□□ -1.01
SNCA-202ENST00000345009 PRKDCP78527 4128 aaKnown RBP8.71□□□□□ -1.02
SNCA-202ENST00000345009 SLC17A3O00476 420 aa8.71□□□□□ -1.02
SNCA-202ENST00000345009 HMGB3O15347 200 aaKnown RBP8.71□□□□□ -1.02
SNCA-202ENST00000345009 CA1P00915 261 aaPredicted RBP8.71□□□□□ -1.02
SNCA-202ENST00000345009 ARL14EPLP0DKL9 152 aa8.71□□□□□ -1.02
SNCA-202ENST00000345009 CD300CQ08708 224 aa8.71□□□□□ -1.02
SNCA-202ENST00000345009 IQCF2Q8IXL9 164 aa8.71□□□□□ -1.02
SNCA-202ENST00000345009 C9orf62Q8N4C0 152 aa8.71□□□□□ -1.02
SNCA-202ENST00000345009 OR8A1Q8NGG7 326 aa8.71□□□□□ -1.02
SNCA-202ENST00000345009 CMTM2Q8TAZ6 248 aa8.71□□□□□ -1.02
SNCA-202ENST00000345009 RXFP4Q8TDU9 374 aa8.71□□□□□ -1.02
SNCA-202ENST00000345009 TMED6Q8WW62 240 aa8.71□□□□□ -1.02
SNCA-202ENST00000345009 RCHY1Q96PM5 261 aa8.71□□□□□ -1.02
SNCA-202ENST00000345009 TM2D3Q9BRN9 247 aa8.71□□□□□ -1.02
SNCA-202ENST00000345009 TP53TG1Q9Y2A0 90 aa8.71□□□□□ -1.02
SNCA-202ENST00000345009 COL7A1Q02388 2944 aa8.7□□□□□ -1.02
SNCA-202ENST00000345009 TEX46H3BTG2 121 aa8.7□□□□□ -1.02
SNCA-202ENST00000345009 SPRY2O43597 315 aa8.7□□□□□ -1.02
SNCA-202ENST00000345009 NDUFB4O95168 129 aa8.7□□□□□ -1.02
SNCA-202ENST00000345009 IGKV3-20P01619 116 aa8.7□□□□□ -1.02
SNCA-202ENST00000345009 AMBPP02760 352 aa8.7□□□□□ -1.02
SNCA-202ENST00000345009 GCHFRP30047 84 aa8.7□□□□□ -1.02
SNCA-202ENST00000345009 CNN1P51911 297 aaKnown RBP8.7□□□□□ -1.02
SNCA-202ENST00000345009 HIST1H1AQ02539 215 aaPredicted RBP8.7□□□□□ -1.02
SNCA-202ENST00000345009 ICAM4Q14773 271 aa8.7□□□□□ -1.02
SNCA-202ENST00000345009 ZNF503Q96F45 646 aa8.7□□□□□ -1.02
SNCA-202ENST00000345009 OTORQ9NRC9 128 aa8.7□□□□□ -1.02
SNCA-202ENST00000345009 U3KQK5 164 aa8.7□□□□□ -1.02
SNCA-202ENST00000345009 MAP1LC3B2A6NCE7 125 aa8.69□□□□□ -1.02
SNCA-202ENST00000345009 ZNF705FA8MVS1 300 aaPredicted RBP8.69□□□□□ -1.02
SNCA-202ENST00000345009 F6UB75 175 aa8.69□□□□□ -1.02
SNCA-202ENST00000345009 HLA-DMBP28068 263 aa8.69□□□□□ -1.02
SNCA-202ENST00000345009 TSPOP30536 169 aa8.69□□□□□ -1.02
SNCA-202ENST00000345009 GDF5OSQ5U4N7 250 aa8.69□□□□□ -1.02
SNCA-202ENST00000345009 EXOC3-AS1Q8N2X6 119 aa8.69□□□□□ -1.02
SNCA-202ENST00000345009 FAM213BQ8TBF2 198 aa8.69□□□□□ -1.02
SNCA-202ENST00000345009 SFT2D1Q8WV19 159 aa8.69□□□□□ -1.02
SNCA-202ENST00000345009 NKX6-2Q9C056 277 aaPredicted RBP8.69□□□□□ -1.02
SNCA-202ENST00000345009 MAP1LC3BQ9GZQ8 125 aa8.69□□□□□ -1.02
SNCA-202ENST00000345009 Q9H3A6 140 aa8.69□□□□□ -1.02
SNCA-202ENST00000345009 PGPA6NDG6 321 aa8.68□□□□□ -1.02
SNCA-202ENST00000345009 DEFB1P60022 68 aa8.68□□□□□ -1.02
SNCA-202ENST00000345009 DEFB135Q30KP9 77 aa8.68□□□□□ -1.02
SNCA-202ENST00000345009 ARL6IP6Q8N6S5 226 aa8.68□□□□□ -1.02
SNCA-202ENST00000345009 RNF183Q96D59 192 aa8.68□□□□□ -1.02
SNCA-202ENST00000345009 PHYHIPLQ96FC7 376 aa8.68□□□□□ -1.02
SNCA-202ENST00000345009 STAB2Q8WWQ8 2551 aa8.68□□□□□ -1.02
SNCA-202ENST00000345009 A0A1W2PRE2 83 aa8.67□□□□□ -1.02
SNCA-202ENST00000345009 K7EQM0 130 aa8.67□□□□□ -1.02
SNCA-202ENST00000345009 M0R3E3 92 aa8.67□□□□□ -1.02
SNCA-202ENST00000345009 EIF3GO75821 320 aaKnown RBP eCLIP8.67□□□□□ -1.02
SNCA-202ENST00000345009 ZNF705DP0CH99 300 aaPredicted RBP8.67□□□□□ -1.02
SNCA-202ENST00000345009 ZNF705BP0CI00 300 aaPredicted RBP8.67□□□□□ -1.02
SNCA-202ENST00000345009 PPT1P50897 306 aa8.67□□□□□ -1.02
SNCA-202ENST00000345009 ZNF726P1Q15940 193 aa8.67□□□□□ -1.02
SNCA-202ENST00000345009 TMEM78Q5T7P6 136 aa8.67□□□□□ -1.02
SNCA-202ENST00000345009 LCE3BQ5TA77 95 aa8.67□□□□□ -1.02
SNCA-202ENST00000345009 SUN5Q8TC36 379 aa8.67□□□□□ -1.02
SNCA-202ENST00000345009 MBD3L1Q8WWY6 194 aa8.67□□□□□ -1.02
SNCA-202ENST00000345009 LINC00477Q96M19 166 aa8.67□□□□□ -1.02
SNCA-202ENST00000345009 XCL2Q9UBD3 114 aa8.67□□□□□ -1.02
SNCA-202ENST00000345009 SERTM2A0A1B0GWG4 89 aa8.66□□□□□ -1.02
SNCA-202ENST00000345009 A8MTW9 85 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms