RNA–Protein interactions for RNA: ENST00000344063.6

RPL28-201, Transcript of ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL28, Length 4,796 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-201ENST00000344063 Q86TA4 180 aa8.77□□□□□ -1.01
RPL28-201ENST00000344063 DEFB125Q8N687 156 aa8.77□□□□□ -1.01
RPL28-201ENST00000344063 K7EP34 96 aa8.76□□□□□ -1.01
RPL28-201ENST00000344063 IGHV4-39P01824 125 aa8.76□□□□□ -1.01
RPL28-201ENST00000344063 PLXNB1O43157 2135 aa8.76□□□□□ -1.01
RPL28-201ENST00000344063 OOSP1A8MZH6 123 aa8.76□□□□□ -1.01
RPL28-201ENST00000344063 IGKV3-20P01619 116 aa8.76□□□□□ -1.01
RPL28-201ENST00000344063 LINC01559Q495D7 138 aa8.76□□□□□ -1.01
RPL28-201ENST00000344063 LINC00311Q8N616 119 aa8.76□□□□□ -1.01
RPL28-201ENST00000344063 TMEM262E9PQX1 116 aa8.76□□□□□ -1.01
RPL28-201ENST00000344063 TMEM155Q4W5P6 130 aa8.76□□□□□ -1.01
RPL28-201ENST00000344063 TEX36Q5VZQ5 186 aa8.76□□□□□ -1.01
RPL28-201ENST00000344063 FAM159AQ6UWV7 190 aa8.76□□□□□ -1.01
RPL28-201ENST00000344063 SLC25A2Q9BXI2 301 aa8.76□□□□□ -1.01
RPL28-201ENST00000344063 K7EMI3 77 aa8.76□□□□□ -1.01
RPL28-201ENST00000344063 ZFAND6Q6FIF0 208 aa8.76□□□□□ -1.01
RPL28-201ENST00000344063 TMEM158Q8WZ71 300 aa8.76□□□□□ -1.01
RPL28-201ENST00000344063 RHOGP84095 191 aa8.75□□□□□ -1.01
RPL28-201ENST00000344063 PLA2G2CQ5R387 149 aa8.75□□□□□ -1.01
RPL28-201ENST00000344063 DUX4L9Q6RFH8 374 aaPredicted RBP8.75□□□□□ -1.01
RPL28-201ENST00000344063 PGPEP1Q9NXJ5 209 aa8.75□□□□□ -1.01
RPL28-201ENST00000344063 IGHV3-64A0A075B6Q5 118 aa8.75□□□□□ -1.01
RPL28-201ENST00000344063 TAX1BP3O14907 124 aa8.75□□□□□ -1.01
RPL28-201ENST00000344063 C5orf64Q2M2E5 130 aa8.75□□□□□ -1.01
RPL28-201ENST00000344063 MALRD1Q5VYJ5 2156 aa8.75□□□□□ -1.01
RPL28-201ENST00000344063 TRAV40A0A0B4J280 105 aa8.74□□□□□ -1.01
RPL28-201ENST00000344063 H3BMG7 143 aa8.74□□□□□ -1.01
RPL28-201ENST00000344063 A0A1W2PPM0 123 aa8.74□□□□□ -1.01
RPL28-201ENST00000344063 THBDP07204 575 aa8.74□□□□□ -1.01
RPL28-201ENST00000344063 WT1-ASQ06250 92 aa8.74□□□□□ -1.01
RPL28-201ENST00000344063 LY6EQ16553 131 aa8.74□□□□□ -1.01
RPL28-201ENST00000344063 IGFL3Q6UXB1 125 aa8.74□□□□□ -1.01
RPL28-201ENST00000344063 SHANK2-AS3Q9BTD1 123 aa8.74□□□□□ -1.01
RPL28-201ENST00000344063 A8MWV9 139 aa8.74□□□□□ -1.01
RPL28-201ENST00000344063 NDUFB8O95169 186 aa8.74□□□□□ -1.01
RPL28-201ENST00000344063 SSBP2P81877 361 aaPredicted RBP8.74□□□□□ -1.01
RPL28-201ENST00000344063 PDE6HQ13956 83 aa8.74□□□□□ -1.01
RPL28-201ENST00000344063 PCP2Q8IVA1 136 aa8.74□□□□□ -1.01
RPL28-201ENST00000344063 ADAMTS9Q9P2N4 1935 aa8.74□□□□□ -1.01
RPL28-201ENST00000344063 TEX48A0A1B0GUV7 120 aa8.74□□□□□ -1.01
RPL28-201ENST00000344063 SH2D1AO60880 128 aa8.74□□□□□ -1.01
RPL28-201ENST00000344063 C10orf142B7Z368 130 aa8.73□□□□□ -1.01
RPL28-201ENST00000344063 NPIPB6E9PJ23 425 aa8.73□□□□□ -1.01
RPL28-201ENST00000344063 ZNF295-AS1Q8N0V1 137 aa8.73□□□□□ -1.01
RPL28-201ENST00000344063 GLMPQ8WWB7 406 aa8.73□□□□□ -1.01
RPL28-201ENST00000344063 GEMIN7Q9H840 131 aaKnown RBP8.73□□□□□ -1.01
RPL28-201ENST00000344063 CHTOPQ9Y3Y2 248 aaKnown RBP8.73□□□□□ -1.01
RPL28-201ENST00000344063 DYSFO75923 2080 aa8.73□□□□□ -1.01
RPL28-201ENST00000344063 IGLV2-14P01704 120 aa8.73□□□□□ -1.01
RPL28-201ENST00000344063 PAPPA-AS1Q5QFB9 102 aa8.73□□□□□ -1.01
RPL28-201ENST00000344063 MINOS1Q5TGZ0 78 aa8.73□□□□□ -1.01
RPL28-201ENST00000344063 MINOS1-NBL1R4GNA1 71 aa8.73□□□□□ -1.01
RPL28-201ENST00000344063 GAGE12HA6NDE8 117 aa8.73□□□□□ -1.01
RPL28-201ENST00000344063 SRRM4A7MD48 611 aaKnown RBP8.73□□□□□ -1.01
RPL28-201ENST00000344063 ZNF56Q15929 161 aa8.73□□□□□ -1.01
RPL28-201ENST00000344063 MORN5Q5VZ52 161 aa8.73□□□□□ -1.01
RPL28-201ENST00000344063 DYNLRB2Q8TF09 96 aa8.73□□□□□ -1.01
RPL28-201ENST00000344063 CCL19Q99731 98 aa8.73□□□□□ -1.01
RPL28-201ENST00000344063 SMPXQ9UHP9 88 aa8.73□□□□□ -1.01
RPL28-201ENST00000344063 TRAV2A0A0B4J234 112 aa8.73□□□□□ -1.01
RPL28-201ENST00000344063 M0R1W7 72 aa8.73□□□□□ -1.01
RPL28-201ENST00000344063 CIRBPQ14011 172 aaKnown RBP8.72□□□□□ -1.01
RPL28-201ENST00000344063 THAP8Q8NA92 274 aa8.72□□□□□ -1.01
RPL28-201ENST00000344063 DKK2Q9UBU2 259 aa8.72□□□□□ -1.01
RPL28-201ENST00000344063 PAX1P15863 534 aa8.72□□□□□ -1.01
RPL28-201ENST00000344063 RBX1P62877 108 aa8.72□□□□□ -1.01
RPL28-201ENST00000344063 ANKRD39Q53RE8 183 aa8.72□□□□□ -1.01
RPL28-201ENST00000344063 LOXP28300 417 aaPredicted RBP8.72□□□□□ -1.01
RPL28-201ENST00000344063 SNRPD3P62318 126 aaKnown RBP8.72□□□□□ -1.01
RPL28-201ENST00000344063 SRSF1Q07955 248 aaKnown RBP eCLIP8.72□□□□□ -1.01
RPL28-201ENST00000344063 SH2D6Q7Z4S9 175 aa8.72□□□□□ -1.01
RPL28-201ENST00000344063 C11orf68Q9H3H3 251 aaKnown RBP8.72□□□□□ -1.01
RPL28-201ENST00000344063 RNF114Q9Y508 228 aa8.72□□□□□ -1.01
RPL28-201ENST00000344063 BDP1A6H8Y1 2624 aa8.72□□□□□ -1.01
RPL28-201ENST00000344063 IGHV3OR16-10A0A075B7F0 116 aa8.72□□□□□ -1.01
RPL28-201ENST00000344063 TMEM8BA6NDV4 472 aa8.72□□□□□ -1.01
RPL28-201ENST00000344063 E7EQL1 145 aa8.72□□□□□ -1.01
RPL28-201ENST00000344063 VMO1Q7Z5L0 202 aa8.72□□□□□ -1.01
RPL28-201ENST00000344063 C8orf49Q96NF6 230 aa8.72□□□□□ -1.01
RPL28-201ENST00000344063 TP53TG3Q9ULZ0 132 aa8.72□□□□□ -1.01
RPL28-201ENST00000344063 MEIG1Q5JSS6 88 aa8.71□□□□□ -1.01
RPL28-201ENST00000344063 TTTY13Q9BZ97 58 aa8.71□□□□□ -1.01
RPL28-201ENST00000344063 TRAV12-3A0A0B4J271 114 aa8.71□□□□□ -1.02
RPL28-201ENST00000344063 TRAV21A0A0B4J279 112 aa8.71□□□□□ -1.02
RPL28-201ENST00000344063 TMEM75Q8N9X5 138 aa8.71□□□□□ -1.02
RPL28-201ENST00000344063 FXYD5Q96DB9 178 aa8.71□□□□□ -1.02
RPL28-201ENST00000344063 SIGLEC8Q9NYZ4 499 aa8.71□□□□□ -1.02
RPL28-201ENST00000344063 FAM215AQ9Y5M1 114 aa8.71□□□□□ -1.02
RPL28-201ENST00000344063 C15orf32Q32M92 178 aa8.71□□□□□ -1.02
RPL28-201ENST00000344063 ORMDL2Q53FV1 153 aa8.71□□□□□ -1.02
RPL28-201ENST00000344063 C19orf54Q5BKX5 351 aa8.71□□□□□ -1.02
RPL28-201ENST00000344063 OR13C6PQ8NH95 151 aa8.71□□□□□ -1.02
RPL28-201ENST00000344063 ATP6V0BQ99437 205 aa8.71□□□□□ -1.02
RPL28-201ENST00000344063 SPRY4Q9C004 299 aa8.71□□□□□ -1.02
RPL28-201ENST00000344063 DSCAML1Q8TD84 2053 aa8.7□□□□□ -1.02
RPL28-201ENST00000344063 DLX4Q92988 240 aaPredicted RBP8.7□□□□□ -1.02
RPL28-201ENST00000344063 TMEM14CQ9P0S9 112 aa8.7□□□□□ -1.02
RPL28-201ENST00000344063 COL8A2P25067 703 aa8.7□□□□□ -1.02
RPL28-201ENST00000344063 KLRD1Q13241 179 aa8.7□□□□□ -1.02
RPL28-201ENST00000344063 LAGE3Q14657 143 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms