RNA–Protein interactions for RNA: ENST00000342690.4

RBM38-201, Transcript of RNA binding motif protein 38, humanhuman

TSL 3

Gene RBM38, Length 852 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM38-201ENST00000342690 MRPL53Q96EL3 112 aaKnown RBP16.23■□□□□ 0.19
RBM38-201ENST00000342690 Q9H3A6 140 aa16.23■□□□□ 0.19
RBM38-201ENST00000342690 KNCNA6PVL3 124 aa16.22■□□□□ 0.19
RBM38-201ENST00000342690 HBE1P02100 147 aa16.22■□□□□ 0.19
RBM38-201ENST00000342690 ACTL10Q5JWF8 245 aa16.22■□□□□ 0.19
RBM38-201ENST00000342690 RPUSD4Q96CM3 377 aaKnown RBP16.22■□□□□ 0.19
RBM38-201ENST00000342690 TMPRSS5Q9H3S3 457 aa16.22■□□□□ 0.19
RBM38-201ENST00000342690 A0A1B0GV50 99 aa16.21■□□□□ 0.19
RBM38-201ENST00000342690 SAV1Q9H4B6 383 aaPredicted RBP16.21■□□□□ 0.19
RBM38-201ENST00000342690 OTORQ9NRC9 128 aa16.21■□□□□ 0.19
RBM38-201ENST00000342690 IFNA7P01567 189 aa16.2■□□□□ 0.18
RBM38-201ENST00000342690 HLA-DRB4P13762 266 aa16.2■□□□□ 0.18
RBM38-201ENST00000342690 CSN1S1P47710 185 aa16.2■□□□□ 0.18
RBM38-201ENST00000342690 BLOC1S1P78537 153 aa16.2■□□□□ 0.18
RBM38-201ENST00000342690 TEX261Q6UWH6 196 aa16.2■□□□□ 0.18
RBM38-201ENST00000342690 HLA-DRB4X5D2U9 266 aa16.2■□□□□ 0.18
RBM38-201ENST00000342690 LOC102724200A0A096LPH7 203 aaPredicted RBP16.19■□□□□ 0.18
RBM38-201ENST00000342690 TRAV1-1A0A0B4J248 108 aa16.19■□□□□ 0.18
RBM38-201ENST00000342690 A0A0J9YX75 114 aa16.19■□□□□ 0.18
RBM38-201ENST00000342690 ZNF705FA8MVS1 300 aaPredicted RBP16.19■□□□□ 0.18
RBM38-201ENST00000342690 PPT1P50897 306 aa16.19■□□□□ 0.18
RBM38-201ENST00000342690 DEFB1P60022 68 aa16.19■□□□□ 0.18
RBM38-201ENST00000342690 HAGHQ16775 308 aa16.19■□□□□ 0.18
RBM38-201ENST00000342690 A0A1W2PRE2 83 aa16.18■□□□□ 0.18
RBM38-201ENST00000342690 PGPA6NDG6 321 aa16.18■□□□□ 0.18
RBM38-201ENST00000342690 F6UB75 175 aa16.18■□□□□ 0.18
RBM38-201ENST00000342690 M0R3E3 92 aa16.18■□□□□ 0.18
RBM38-201ENST00000342690 DUSP14O95147 198 aaKnown RBP16.18■□□□□ 0.18
RBM38-201ENST00000342690 RPL35AP18077 110 aaKnown RBP16.18■□□□□ 0.18
RBM38-201ENST00000342690 UBE2G2P60604 165 aa16.18■□□□□ 0.18
RBM38-201ENST00000342690 GDF5OSQ5U4N7 250 aa16.18■□□□□ 0.18
RBM38-201ENST00000342690 CMTM2Q8TAZ6 248 aa16.18■□□□□ 0.18
RBM38-201ENST00000342690 H3BMM0 161 aa16.17■□□□□ 0.18
RBM38-201ENST00000342690 HIST1H1AQ02539 215 aaPredicted RBP16.17■□□□□ 0.18
RBM38-201ENST00000342690 TRPT1Q86TN4 253 aaKnown RBP16.17■□□□□ 0.18
RBM38-201ENST00000342690 ZNF680Q8NEM1 530 aa16.17■□□□□ 0.18
RBM38-201ENST00000342690 OR8A1Q8NGG7 326 aa16.17■□□□□ 0.18
RBM38-201ENST00000342690 OR10J6PQ8NGY7 276 aa16.17■□□□□ 0.18
RBM38-201ENST00000342690 RXFP4Q8TDU9 374 aa16.17■□□□□ 0.18
RBM38-201ENST00000342690 SLC25A5P05141 298 aaKnown RBP16.16■□□□□ 0.18
RBM38-201ENST00000342690 OR4B1Q8NGF8 309 aa16.16■□□□□ 0.18
RBM38-201ENST00000342690 NKX6-2Q9C056 277 aaPredicted RBP16.16■□□□□ 0.18
RBM38-201ENST00000342690 ARL2-SNX15V9GYD0 113 aa16.16■□□□□ 0.18
RBM38-201ENST00000342690 APOC4P55056 127 aa16.15■□□□□ 0.18
RBM38-201ENST00000342690 SUMO1P63165 101 aaKnown RBP16.15■□□□□ 0.18
RBM38-201ENST00000342690 ARL6IP6Q8N6S5 226 aa16.15■□□□□ 0.18
RBM38-201ENST00000342690 MANBALQ9NQG1 85 aa16.15■□□□□ 0.18
RBM38-201ENST00000342690 YTHDF2Q9Y5A9 579 aaKnown RBP16.15■□□□□ 0.18
RBM38-201ENST00000342690 FAM74A7A6NL05 159 aa16.14■□□□□ 0.17
RBM38-201ENST00000342690 PRAC2D3DTV9 90 aa16.14■□□□□ 0.17
RBM38-201ENST00000342690 IGKV3-20P01619 116 aa16.14■□□□□ 0.17
RBM38-201ENST00000342690 NHLRC4P0CG21 123 aaPredicted RBP16.14■□□□□ 0.17
RBM38-201ENST00000342690 ZNF705DP0CH99 300 aaPredicted RBP16.14■□□□□ 0.17
RBM38-201ENST00000342690 ZNF705BP0CI00 300 aaPredicted RBP16.14■□□□□ 0.17
RBM38-201ENST00000342690 PRB4P10163 310 aaPredicted RBP16.14■□□□□ 0.17
RBM38-201ENST00000342690 CNN1P51911 297 aaKnown RBP16.14■□□□□ 0.17
RBM38-201ENST00000342690 NUTF2P61970 127 aaKnown RBP16.14■□□□□ 0.17
RBM38-201ENST00000342690 C5orf17Q8NAS9 161 aa16.14■□□□□ 0.17
RBM38-201ENST00000342690 TM2D3Q9BRN9 247 aa16.14■□□□□ 0.17
RBM38-201ENST00000342690 RPH3ALQ9UNE2 315 aa16.14■□□□□ 0.17
RBM38-201ENST00000342690 DNAH9Q9NYC9 4486 aa16.13■□□□□ 0.17
RBM38-201ENST00000342690 GGTLC3B5MD39 225 aa16.13■□□□□ 0.17
RBM38-201ENST00000342690 IFNA1P01562 189 aa16.13■□□□□ 0.17
RBM38-201ENST00000342690 CST9LP1Q5W188 147 aa16.13■□□□□ 0.17
RBM38-201ENST00000342690 MORN3Q6PF18 240 aaPredicted RBP16.13■□□□□ 0.17
RBM38-201ENST00000342690 CLUHP3Q96NS8 147 aa16.13■□□□□ 0.17
RBM38-201ENST00000342690 PPP1R14DQ9NXH3 145 aa16.13■□□□□ 0.17
RBM38-201ENST00000342690 GNG13Q9P2W3 67 aa16.13■□□□□ 0.17
RBM38-201ENST00000342690 KIR2DL5BA0A0G2JN68 375 aa16.12■□□□□ 0.17
RBM38-201ENST00000342690 KIR2DL5BA0A0G2JPC4 375 aa16.12■□□□□ 0.17
RBM38-201ENST00000342690 PAGE4O60829 102 aa16.12■□□□□ 0.17
RBM38-201ENST00000342690 CCL20P78556 96 aa16.12■□□□□ 0.17
RBM38-201ENST00000342690 KIR2DL5AQ8N109 375 aa16.12■□□□□ 0.17
RBM38-201ENST00000342690 KIR2DL5BQ8NHK3 375 aa16.12■□□□□ 0.17
RBM38-201ENST00000342690 AGRNO00468 2067 aa16.11■□□□□ 0.17
RBM38-201ENST00000342690 IGKV2-40A0A087WW87 121 aaPredicted RBP16.11■□□□□ 0.17
RBM38-201ENST00000342690 DIRC3C9JPN6 131 aa16.11■□□□□ 0.17
RBM38-201ENST00000342690 NPIPB6E9PJ23 425 aa16.11■□□□□ 0.17
RBM38-201ENST00000342690 IGKV2D-40P01614 121 aaPredicted RBP16.11■□□□□ 0.17
RBM38-201ENST00000342690 CSTL1Q9H114 145 aa16.11■□□□□ 0.17
RBM38-201ENST00000342690 RETNQ9HD89 108 aa16.11■□□□□ 0.17
RBM38-201ENST00000342690 SERTM2A0A1B0GWG4 89 aa16.1■□□□□ 0.17
RBM38-201ENST00000342690 RBAKDNA6NC62 111 aa16.1■□□□□ 0.17
RBM38-201ENST00000342690 A8MTW9 85 aa16.1■□□□□ 0.17
RBM38-201ENST00000342690 K7EQM0 130 aa16.1■□□□□ 0.17
RBM38-201ENST00000342690 UBE2CO00762 179 aa16.1■□□□□ 0.17
RBM38-201ENST00000342690 GNG5P63218 68 aa16.1■□□□□ 0.17
RBM38-201ENST00000342690 TMEM78Q5T7P6 136 aa16.1■□□□□ 0.17
RBM38-201ENST00000342690 SPATA25Q9BR10 227 aa16.1■□□□□ 0.17
RBM38-201ENST00000342690 EPDR1Q9UM22 224 aa16.1■□□□□ 0.17
RBM38-201ENST00000342690 CA1P00915 261 aaPredicted RBP16.09■□□□□ 0.17
RBM38-201ENST00000342690 GOLT1AQ6ZVE7 132 aa16.09■□□□□ 0.17
RBM38-201ENST00000342690 TCEAL7Q9BRU2 100 aa16.09■□□□□ 0.17
RBM38-201ENST00000342690 ZMAT4Q9H898 229 aa16.09■□□□□ 0.17
RBM38-201ENST00000342690 ATP5G3P48201 142 aa16.08■□□□□ 0.16
RBM38-201ENST00000342690 ERCC8Q13216 396 aa16.08■□□□□ 0.16
RBM38-201ENST00000342690 PMS2P11Q13670 270 aa16.08■□□□□ 0.16
RBM38-201ENST00000342690 C9orf47Q6ZRZ4 202 aa16.08■□□□□ 0.16
RBM38-201ENST00000342690 LYPD6BQ8NI32 183 aa16.08■□□□□ 0.16
RBM38-201ENST00000342690 LINC00477Q96M19 166 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms