RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 ZNRF1Q8ND25 227 aa14.63□□□□□ -0.07
SMPD1-201ENST00000342245 MYMXA0A1B0GTQ4 84 aa14.62□□□□□ -0.07
SMPD1-201ENST00000342245 SAP25Q8TEE9 199 aa14.62□□□□□ -0.07
SMPD1-201ENST00000342245 TRAV40A0A0B4J280 105 aa14.61□□□□□ -0.07
SMPD1-201ENST00000342245 M0QXV9 152 aa14.61□□□□□ -0.07
SMPD1-201ENST00000342245 UBE2D3P61077 147 aa14.61□□□□□ -0.07
SMPD1-201ENST00000342245 UBE2D2P62837 147 aa14.61□□□□□ -0.07
SMPD1-201ENST00000342245 PLGLAQ15195 96 aa14.61□□□□□ -0.07
SMPD1-201ENST00000342245 PIP4P1Q86T03 277 aa14.61□□□□□ -0.07
SMPD1-201ENST00000342245 MYOZ3Q8TDC0 251 aa14.61□□□□□ -0.07
SMPD1-201ENST00000342245 TM4SF5O14894 197 aa14.61□□□□□ -0.07
SMPD1-201ENST00000342245 A0A087WX48 190 aa14.6□□□□□ -0.07
SMPD1-201ENST00000342245 K7EM74 188 aa14.6□□□□□ -0.07
SMPD1-201ENST00000342245 IGHV3-48P01763 117 aa14.6□□□□□ -0.07
SMPD1-201ENST00000342245 TTC32Q5I0X7 151 aa14.6□□□□□ -0.07
SMPD1-201ENST00000342245 MBNL2Q5VZF2 373 aaKnown RBP14.6□□□□□ -0.07
SMPD1-201ENST00000342245 CACNA1EQ15878 2313 aa14.6□□□□□ -0.07
SMPD1-201ENST00000342245 TRBV19A0A075B6N1 114 aa14.6□□□□□ -0.07
SMPD1-201ENST00000342245 CGB1A6NKQ9 187 aa14.6□□□□□ -0.07
SMPD1-201ENST00000342245 E7EUB6 86 aa14.6□□□□□ -0.07
SMPD1-201ENST00000342245 SNCGO76070 127 aa14.6□□□□□ -0.07
SMPD1-201ENST00000342245 SPINK14Q6IE38 97 aa14.6□□□□□ -0.07
SMPD1-201ENST00000342245 SCNM1Q9BWG6 230 aa14.6□□□□□ -0.07
SMPD1-201ENST00000342245 RPUSD1Q9UJJ7 312 aaKnown RBP14.6□□□□□ -0.07
SMPD1-201ENST00000342245 IFITM1P13164 125 aa14.59□□□□□ -0.07
SMPD1-201ENST00000342245 MAGEA5P43359 124 aa14.59□□□□□ -0.07
SMPD1-201ENST00000342245 DIAPH2-AS1Q14236 149 aa14.59□□□□□ -0.07
SMPD1-201ENST00000342245 Q8N8P6 123 aa14.59□□□□□ -0.07
SMPD1-201ENST00000342245 OR4C13Q8NGP0 309 aa14.59□□□□□ -0.07
SMPD1-201ENST00000342245 FBXL15Q9H469 300 aa14.59□□□□□ -0.07
SMPD1-201ENST00000342245 MRPL35Q9NZE8 188 aaKnown RBP14.59□□□□□ -0.07
SMPD1-201ENST00000342245 SMKR1H3BMG3 65 aa14.59□□□□□ -0.07
SMPD1-201ENST00000342245 COX8CQ7Z4L0 72 aa14.59□□□□□ -0.07
SMPD1-201ENST00000342245 TTTY12Q9BZ98 90 aa14.58□□□□□ -0.07
SMPD1-201ENST00000342245 CCDC179H3BU77 68 aa14.58□□□□□ -0.08
SMPD1-201ENST00000342245 NGBQ9NPG2 151 aa14.58□□□□□ -0.08
SMPD1-201ENST00000342245 IGHV3OR15-7A0A075B7D8 119 aa14.57□□□□□ -0.08
SMPD1-201ENST00000342245 LOC107984156A0A0G2JMH3 177 aa14.57□□□□□ -0.08
SMPD1-201ENST00000342245 J3KRW8 73 aa14.57□□□□□ -0.08
SMPD1-201ENST00000342245 TNFRSF6BO95407 300 aa14.57□□□□□ -0.08
SMPD1-201ENST00000342245 UBE2D1P51668 147 aa14.57□□□□□ -0.08
SMPD1-201ENST00000342245 ARL17AQ8IVW1 177 aa14.57□□□□□ -0.08
SMPD1-201ENST00000342245 YAE1D1Q9NRH1 226 aa14.57□□□□□ -0.08
SMPD1-201ENST00000342245 SIT1Q9Y3P8 196 aa14.57□□□□□ -0.08
SMPD1-201ENST00000342245 PI4KAP42356 2102 aa14.57□□□□□ -0.08
SMPD1-201ENST00000342245 CCL4P13236 92 aa14.57□□□□□ -0.08
SMPD1-201ENST00000342245 SRSF2Q01130 221 aaKnown RBP14.57□□□□□ -0.08
SMPD1-201ENST00000342245 OR11H6Q8NGC7 330 aa14.57□□□□□ -0.08
SMPD1-201ENST00000342245 VPS13AQ96RL7 3174 aa14.57□□□□□ -0.08
SMPD1-201ENST00000342245 LINC01549A6NIU2 74 aa14.56□□□□□ -0.08
SMPD1-201ENST00000342245 SH2D1AO60880 128 aa14.56□□□□□ -0.08
SMPD1-201ENST00000342245 FCN3O75636 299 aa14.56□□□□□ -0.08
SMPD1-201ENST00000342245 IGKV3-15P01624 115 aa14.56□□□□□ -0.08
SMPD1-201ENST00000342245 IGHV1-2P23083 117 aa14.56□□□□□ -0.08
SMPD1-201ENST00000342245 SIGLEC15Q6ZMC9 328 aa14.56□□□□□ -0.08
SMPD1-201ENST00000342245 MRPL20Q9BYC9 149 aaKnown RBP14.56□□□□□ -0.08
SMPD1-201ENST00000342245 TRAV12-1A0A0B4J245 112 aa14.56□□□□□ -0.08
SMPD1-201ENST00000342245 Q71RC1 249 aaPredicted RBP14.56□□□□□ -0.08
SMPD1-201ENST00000342245 PTH2Q96A98 100 aa14.56□□□□□ -0.08
SMPD1-201ENST00000342245 LYZP61626 148 aa14.55□□□□□ -0.08
SMPD1-201ENST00000342245 VMA21Q3ZAQ7 101 aa14.55□□□□□ -0.08
SMPD1-201ENST00000342245 RNF185Q96GF1 192 aa14.55□□□□□ -0.08
SMPD1-201ENST00000342245 TNCP24821 2201 aa14.55□□□□□ -0.08
SMPD1-201ENST00000342245 A0A1W2PPI3 338 aa14.55□□□□□ -0.08
SMPD1-201ENST00000342245 CEACAM4O75871 244 aa14.55□□□□□ -0.08
SMPD1-201ENST00000342245 CFIP05156 583 aa14.55□□□□□ -0.08
SMPD1-201ENST00000342245 PRR30Q53SZ7 412 aaPredicted RBP14.55□□□□□ -0.08
SMPD1-201ENST00000342245 CNFNQ9BYD5 112 aa14.55□□□□□ -0.08
SMPD1-201ENST00000342245 H7C1H1 209 aa14.54□□□□□ -0.08
SMPD1-201ENST00000342245 LHBP01229 141 aa14.54□□□□□ -0.08
SMPD1-201ENST00000342245 IGLC6P0CF74 106 aa14.54□□□□□ -0.08
SMPD1-201ENST00000342245 SCGB1C2P0DMR2 95 aa14.54□□□□□ -0.08
SMPD1-201ENST00000342245 FZR1Q9UM11 496 aa14.54□□□□□ -0.08
SMPD1-201ENST00000342245 DMDP11532 3685 aa14.54□□□□□ -0.08
SMPD1-201ENST00000342245 TMSB15BA0A087X1C1 80 aa14.53□□□□□ -0.08
SMPD1-201ENST00000342245 PPP1R27Q86WC6 154 aa14.53□□□□□ -0.08
SMPD1-201ENST00000342245 C8orf49Q96NF6 230 aa14.53□□□□□ -0.08
SMPD1-201ENST00000342245 PATE3B3GLJ2 98 aa14.53□□□□□ -0.08
SMPD1-201ENST00000342245 F8VRH5 84 aa14.53□□□□□ -0.08
SMPD1-201ENST00000342245 C10orf55Q5SWW7 151 aa14.53□□□□□ -0.08
SMPD1-201ENST00000342245 ANKRD29Q8N6D5 301 aa14.53□□□□□ -0.08
SMPD1-201ENST00000342245 SHANK2-AS3Q9BTD1 123 aa14.53□□□□□ -0.08
SMPD1-201ENST00000342245 TMEM126AQ9H061 195 aa14.53□□□□□ -0.08
SMPD1-201ENST00000342245 PDE6HQ13956 83 aa14.52□□□□□ -0.08
SMPD1-201ENST00000342245 LAGE3Q14657 143 aa14.52□□□□□ -0.08
SMPD1-201ENST00000342245 PMS2CLQ68D20 193 aa14.52□□□□□ -0.08
SMPD1-201ENST00000342245 MAFAQ8NHW3 353 aaPredicted RBP14.52□□□□□ -0.08
SMPD1-201ENST00000342245 AJUBAQ96IF1 538 aa14.52□□□□□ -0.08
SMPD1-201ENST00000342245 KIR2DL4Q99706 377 aa14.52□□□□□ -0.08
SMPD1-201ENST00000342245 FRYLO94915 3013 aa14.52□□□□□ -0.09
SMPD1-201ENST00000342245 AAMDCQ9H7C9 122 aa14.52□□□□□ -0.09
SMPD1-201ENST00000342245 AGRNO00468 2067 aa14.51□□□□□ -0.09
SMPD1-201ENST00000342245 KNTC1P50748 2209 aa14.51□□□□□ -0.09
SMPD1-201ENST00000342245 LYZL6O75951 148 aa14.51□□□□□ -0.09
SMPD1-201ENST00000342245 LGALS1P09382 135 aaKnown RBP14.51□□□□□ -0.09
SMPD1-201ENST00000342245 ZFP2Q6ZN57 461 aa14.51□□□□□ -0.09
SMPD1-201ENST00000342245 RASL11BQ9BPW5 248 aa14.51□□□□□ -0.09
SMPD1-201ENST00000342245 HEATR1Q9H583 2144 aaKnown RBP14.51□□□□□ -0.09
SMPD1-201ENST00000342245 IGLV2-18A0A075B6J9 118 aa14.51□□□□□ -0.09
SMPD1-201ENST00000342245 TMEM78Q5T7P6 136 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 100.9 ms