RNA–Protein interactions for RNA: ENST00000341398.6

NECTIN1-203, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,377 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-203ENST00000341398 PYGO2Q9BRQ0 406 aa9.11□□□□□ -0.95
NECTIN1-203ENST00000341398 C20orf85Q9H1P6 137 aa9.11□□□□□ -0.95
NECTIN1-203ENST00000341398 RCL1Q9Y2P8 373 aaKnown RBP9.11□□□□□ -0.95
NECTIN1-203ENST00000341398 GAGE12BA1L429 117 aa9.1□□□□□ -0.95
NECTIN1-203ENST00000341398 H3BNG1 76 aa9.1□□□□□ -0.95
NECTIN1-203ENST00000341398 GAGE7O76087 117 aa9.1□□□□□ -0.95
NECTIN1-203ENST00000341398 GAGE12FP0CL80 117 aa9.1□□□□□ -0.95
NECTIN1-203ENST00000341398 GAGE12GP0CL81 117 aa9.1□□□□□ -0.95
NECTIN1-203ENST00000341398 GAGE12IP0CL82 117 aa9.1□□□□□ -0.95
NECTIN1-203ENST00000341398 PRB4P10163 310 aaPredicted RBP9.1□□□□□ -0.95
NECTIN1-203ENST00000341398 PVALBP20472 110 aaPredicted RBP9.1□□□□□ -0.95
NECTIN1-203ENST00000341398 ARL16Q0P5N6 197 aa9.1□□□□□ -0.95
NECTIN1-203ENST00000341398 OPCMLQ14982 345 aa9.1□□□□□ -0.95
NECTIN1-203ENST00000341398 GFI1BQ5VTD9 330 aa9.1□□□□□ -0.95
NECTIN1-203ENST00000341398 ODF3Q96PU9 254 aa9.1□□□□□ -0.95
NECTIN1-203ENST00000341398 MGST2Q99735 147 aa9.1□□□□□ -0.95
NECTIN1-203ENST00000341398 KRTAP4-5Q9BYR2 181 aa9.1□□□□□ -0.95
NECTIN1-203ENST00000341398 TRAV12-3A0A0B4J271 114 aa9.09□□□□□ -0.95
NECTIN1-203ENST00000341398 A0A0J9YY99 117 aa9.09□□□□□ -0.95
NECTIN1-203ENST00000341398 A0A1W2PPQ1 181 aa9.09□□□□□ -0.95
NECTIN1-203ENST00000341398 FAM25EA8MYX2 175 aa9.09□□□□□ -0.95
NECTIN1-203ENST00000341398 H3BTX0 84 aa9.09□□□□□ -0.95
NECTIN1-203ENST00000341398 J3KRW8 73 aa9.09□□□□□ -0.95
NECTIN1-203ENST00000341398 IGLC2P0DOY2 106 aa9.09□□□□□ -0.95
NECTIN1-203ENST00000341398 BTF3P20290 206 aaKnown RBP9.09□□□□□ -0.95
NECTIN1-203ENST00000341398 CAV2P51636 162 aa9.09□□□□□ -0.95
NECTIN1-203ENST00000341398 NRARPQ7Z6K4 114 aa9.09□□□□□ -0.95
NECTIN1-203ENST00000341398 LINC00612Q8N6U2 182 aa9.09□□□□□ -0.95
NECTIN1-203ENST00000341398 SAT2Q96F10 170 aaPredicted RBP9.09□□□□□ -0.95
NECTIN1-203ENST00000341398 UQCC1Q9NVA1 299 aa9.09□□□□□ -0.95
NECTIN1-203ENST00000341398 LSM5Q9Y4Y9 91 aaKnown RBP9.09□□□□□ -0.95
NECTIN1-203ENST00000341398 C5orf51A6NDU8 294 aa9.08□□□□□ -0.96
NECTIN1-203ENST00000341398 PRAC2D3DTV9 90 aa9.08□□□□□ -0.96
NECTIN1-203ENST00000341398 H3BQ15 152 aa9.08□□□□□ -0.96
NECTIN1-203ENST00000341398 SLC17A3O00476 420 aa9.08□□□□□ -0.96
NECTIN1-203ENST00000341398 ZNF253O75346 499 aa9.08□□□□□ -0.96
NECTIN1-203ENST00000341398 SLC25A5P05141 298 aaKnown RBP9.08□□□□□ -0.96
NECTIN1-203ENST00000341398 CT45A10P0DMU9 189 aa9.08□□□□□ -0.96
NECTIN1-203ENST00000341398 DAZ2Q13117 558 aaKnown RBP9.08□□□□□ -0.96
NECTIN1-203ENST00000341398 KIR3DS1Q14943 382 aa9.08□□□□□ -0.96
NECTIN1-203ENST00000341398 MAPKAPK5-AS1Q8N8E1 139 aa9.08□□□□□ -0.96
NECTIN1-203ENST00000341398 ZNF431Q8TF32 576 aaPredicted RBP9.08□□□□□ -0.96
NECTIN1-203ENST00000341398 UPK3BQ9BT76 320 aa9.08□□□□□ -0.96
NECTIN1-203ENST00000341398 PARD6GQ9BYG4 376 aaPredicted RBP9.08□□□□□ -0.96
NECTIN1-203ENST00000341398 Q9H3A6 140 aa9.08□□□□□ -0.96
NECTIN1-203ENST00000341398 TRGV2A0A075B6R0 118 aa9.07□□□□□ -0.96
NECTIN1-203ENST00000341398 NPIPB6E9PJ23 425 aa9.07□□□□□ -0.96
NECTIN1-203ENST00000341398 S100A11P31949 105 aa9.07□□□□□ -0.96
NECTIN1-203ENST00000341398 HBG1P69891 147 aa9.07□□□□□ -0.96
NECTIN1-203ENST00000341398 HBG2P69892 147 aa9.07□□□□□ -0.96
NECTIN1-203ENST00000341398 ESRGQ1W209 222 aa9.07□□□□□ -0.96
NECTIN1-203ENST00000341398 MIC13Q5XKP0 118 aa9.07□□□□□ -0.96
NECTIN1-203ENST00000341398 ZNF680Q8NEM1 530 aa9.07□□□□□ -0.96
NECTIN1-203ENST00000341398 MRPL53Q96EL3 112 aaKnown RBP9.07□□□□□ -0.96
NECTIN1-203ENST00000341398 LINC00477Q96M19 166 aa9.07□□□□□ -0.96
NECTIN1-203ENST00000341398 PRELID1Q9Y255 219 aa9.07□□□□□ -0.96
NECTIN1-203ENST00000341398 CST7O76096 145 aa9.06□□□□□ -0.96
NECTIN1-203ENST00000341398 IL7P13232 177 aa9.06□□□□□ -0.96
NECTIN1-203ENST00000341398 HOXA5P20719 270 aa9.06□□□□□ -0.96
NECTIN1-203ENST00000341398 BTCP35070 178 aa9.06□□□□□ -0.96
NECTIN1-203ENST00000341398 RPL29P47914 159 aaKnown RBP9.06□□□□□ -0.96
NECTIN1-203ENST00000341398 MORN5Q5VZ52 161 aa9.06□□□□□ -0.96
NECTIN1-203ENST00000341398 SPATA12Q7Z6I5 190 aa9.06□□□□□ -0.96
NECTIN1-203ENST00000341398 C2orf50Q96LR7 162 aa9.06□□□□□ -0.96
NECTIN1-203ENST00000341398 RBM38Q9H0Z9 239 aaKnown RBP9.06□□□□□ -0.96
NECTIN1-203ENST00000341398 WDR83OSQ9Y284 106 aa9.06□□□□□ -0.96
NECTIN1-203ENST00000341398 MRPS16Q9Y3D3 137 aaKnown RBP9.06□□□□□ -0.96
NECTIN1-203ENST00000341398 TIMM9Q9Y5J7 89 aa9.06□□□□□ -0.96
NECTIN1-203ENST00000341398 TRAV5A0A0B4J249 113 aa9.05□□□□□ -0.96
NECTIN1-203ENST00000341398 C7orf71A4D174 169 aa9.05□□□□□ -0.96
NECTIN1-203ENST00000341398 FAM24AA6NFZ4 105 aa9.05□□□□□ -0.96
NECTIN1-203ENST00000341398 CCSO14618 274 aa9.05□□□□□ -0.96
NECTIN1-203ENST00000341398 BAXQ07812 192 aa9.05□□□□□ -0.96
NECTIN1-203ENST00000341398 ATP6V1FQ16864 119 aa9.05□□□□□ -0.96
NECTIN1-203ENST00000341398 STX12Q86Y82 276 aa9.05□□□□□ -0.96
NECTIN1-203ENST00000341398 SDHCQ99643 169 aaPredicted RBP9.05□□□□□ -0.96
NECTIN1-203ENST00000341398 AAMDCQ9H7C9 122 aa9.05□□□□□ -0.96
NECTIN1-203ENST00000341398 SLC39A9Q9NUM3 307 aa9.05□□□□□ -0.96
NECTIN1-203ENST00000341398 ZNF586Q9NXT0 402 aa9.05□□□□□ -0.96
NECTIN1-203ENST00000341398 TRBV19A0A075B6N1 114 aa9.04□□□□□ -0.96
NECTIN1-203ENST00000341398 LYRM1O43325 122 aa9.04□□□□□ -0.96
NECTIN1-203ENST00000341398 TCRBP04435 133 aa9.04□□□□□ -0.96
NECTIN1-203ENST00000341398 GPX1P07203 203 aa9.04□□□□□ -0.96
NECTIN1-203ENST00000341398 HIST1H1EP10412 219 aaKnown RBP9.04□□□□□ -0.96
NECTIN1-203ENST00000341398 SULT1A1P50225 295 aa9.04□□□□□ -0.96
NECTIN1-203ENST00000341398 PDE6HQ13956 83 aa9.04□□□□□ -0.96
NECTIN1-203ENST00000341398 Q6ZTI0 123 aa9.04□□□□□ -0.96
NECTIN1-203ENST00000341398 EIF4E3Q8N5X7 224 aaKnown RBP9.04□□□□□ -0.96
NECTIN1-203ENST00000341398 CHAC2Q8WUX2 184 aa9.04□□□□□ -0.96
NECTIN1-203ENST00000341398 C18orf15Q96N68 181 aa9.04□□□□□ -0.96
NECTIN1-203ENST00000341398 TMPRSS5Q9H3S3 457 aa9.04□□□□□ -0.96
NECTIN1-203ENST00000341398 TMEM14CQ9P0S9 112 aa9.04□□□□□ -0.96
NECTIN1-203ENST00000341398 HSPG2P98160 4391 aa9.04□□□□□ -0.96
NECTIN1-203ENST00000341398 HERC1Q15751 4861 aa9.03□□□□□ -0.96
NECTIN1-203ENST00000341398 TRAV6A0A075B6T7 132 aa9.03□□□□□ -0.96
NECTIN1-203ENST00000341398 UBE2L5PA0A1B0GUS4 154 aa9.03□□□□□ -0.96
NECTIN1-203ENST00000341398 MPDU1O75352 247 aa9.03□□□□□ -0.96
NECTIN1-203ENST00000341398 S100A10P60903 97 aa9.03□□□□□ -0.96
NECTIN1-203ENST00000341398 VWC2Q2TAL6 325 aa9.03□□□□□ -0.96
NECTIN1-203ENST00000341398 ANXA2RQ3ZCQ2 193 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms