RNA–Protein interactions for RNA: ENST00000339598.7

OTOF-203, Transcript of otoferlin, humanhuman

TSL 1 (best) BASIC

Gene OTOF, Length 4,756 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTOF-203ENST00000339598 NSUN5P1Q3KNT7 163 aa10.07□□□□□ -0.8
OTOF-203ENST00000339598 SRSF8Q9BRL6 282 aaKnown RBP10.07□□□□□ -0.8
OTOF-203ENST00000339598 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.06□□□□□ -0.8
OTOF-203ENST00000339598 TMEM213A2RRL7 107 aa10.06□□□□□ -0.8
OTOF-203ENST00000339598 CKS1BP61024 79 aa10.06□□□□□ -0.8
OTOF-203ENST00000339598 DUX4L9Q6RFH8 374 aaPredicted RBP10.06□□□□□ -0.8
OTOF-203ENST00000339598 PAX4O43316 350 aa10.06□□□□□ -0.8
OTOF-203ENST00000339598 TNFRSF6BO95407 300 aa10.06□□□□□ -0.8
OTOF-203ENST00000339598 NDUFB8O95169 186 aa10.05□□□□□ -0.8
OTOF-203ENST00000339598 CFHR2P36980 270 aa10.05□□□□□ -0.8
OTOF-203ENST00000339598 ZNF415Q09FC8 603 aa10.05□□□□□ -0.8
OTOF-203ENST00000339598 UBE2E2Q96LR5 201 aa10.05□□□□□ -0.8
OTOF-203ENST00000339598 ANAPC13Q9BS18 74 aa10.05□□□□□ -0.8
OTOF-203ENST00000339598 POLR3KQ9Y2Y1 108 aaPredicted RBP10.05□□□□□ -0.8
OTOF-203ENST00000339598 C20orf144Q9BQM9 153 aa10.05□□□□□ -0.8
OTOF-203ENST00000339598 GFRA4Q9GZZ7 299 aa10.05□□□□□ -0.8
OTOF-203ENST00000339598 DAZ1Q9NQZ3 744 aaKnown RBP10.05□□□□□ -0.8
OTOF-203ENST00000339598 FREM1Q5H8C1 2179 aa10.05□□□□□ -0.8
OTOF-203ENST00000339598 GATA4P43694 442 aa10.05□□□□□ -0.8
OTOF-203ENST00000339598 GAGE2BQ13066 116 aa10.05□□□□□ -0.8
OTOF-203ENST00000339598 GAGE2EQ4V326 116 aa10.05□□□□□ -0.8
OTOF-203ENST00000339598 PRR30Q53SZ7 412 aaPredicted RBP10.05□□□□□ -0.8
OTOF-203ENST00000339598 GAGE2DQ9UEU5 116 aa10.05□□□□□ -0.8
OTOF-203ENST00000339598 TRAV8-4A0A0B4J246 113 aa10.04□□□□□ -0.8
OTOF-203ENST00000339598 LY6G6EA0A0G2JKS1 128 aa10.04□□□□□ -0.8
OTOF-203ENST00000339598 WIPF3A6NGB9 483 aa10.04□□□□□ -0.8
OTOF-203ENST00000339598 CD5LO43866 347 aa10.04□□□□□ -0.8
OTOF-203ENST00000339598 WT1-ASQ06250 92 aa10.04□□□□□ -0.8
OTOF-203ENST00000339598 PRADC1Q9BSG0 188 aa10.04□□□□□ -0.8
OTOF-203ENST00000339598 JPT2Q9H910 190 aa10.04□□□□□ -0.8
OTOF-203ENST00000339598 U3KQA8 63 aa10.04□□□□□ -0.8
OTOF-203ENST00000339598 FAM231BA6NCW3 169 aa10.04□□□□□ -0.8
OTOF-203ENST00000339598 SYNJ2BPP57105 145 aa10.04□□□□□ -0.8
OTOF-203ENST00000339598 COL4A6Q14031 1691 aa10.04□□□□□ -0.8
OTOF-203ENST00000339598 GAGE12BA1L429 117 aa10.04□□□□□ -0.8
OTOF-203ENST00000339598 TDGF1P3P51864 188 aa10.04□□□□□ -0.8
OTOF-203ENST00000339598 LCNL1Q6ZST4 164 aa10.04□□□□□ -0.8
OTOF-203ENST00000339598 ZNF114Q8NC26 417 aa10.04□□□□□ -0.8
OTOF-203ENST00000339598 ZNF492Q9P255 531 aa10.04□□□□□ -0.8
OTOF-203ENST00000339598 CCDC168Q8NDH2 2452 aa10.04□□□□□ -0.8
OTOF-203ENST00000339598 TRAV13-1A0A0B4J241 112 aa10.03□□□□□ -0.8
OTOF-203ENST00000339598 ATP6V0E1O15342 81 aa10.03□□□□□ -0.8
OTOF-203ENST00000339598 YPEL3P61236 119 aaPredicted RBP10.03□□□□□ -0.8
OTOF-203ENST00000339598 S100A7L2Q5SY68 101 aa10.03□□□□□ -0.8
OTOF-203ENST00000339598 MYO9AB2RTY4 2548 aa10.03□□□□□ -0.8
OTOF-203ENST00000339598 G3V318 75 aa10.03□□□□□ -0.8
OTOF-203ENST00000339598 C17orf58Q2M2W7 97 aa10.03□□□□□ -0.8
OTOF-203ENST00000339598 HAPLN4Q86UW8 402 aa10.03□□□□□ -0.8
OTOF-203ENST00000339598 SPOCK3Q9BQ16 436 aa10.03□□□□□ -0.8
OTOF-203ENST00000339598 TRBV19A0A075B6N1 114 aa10.03□□□□□ -0.8
OTOF-203ENST00000339598 FAM223BA6NKX1 122 aa10.03□□□□□ -0.8
OTOF-203ENST00000339598 MMP23AO75900 390 aa10.03□□□□□ -0.8
OTOF-203ENST00000339598 LOXP28300 417 aaPredicted RBP10.03□□□□□ -0.8
OTOF-203ENST00000339598 FAM223AQ8IWN6 122 aa10.03□□□□□ -0.8
OTOF-203ENST00000339598 GATD1Q8NB37 220 aa10.03□□□□□ -0.8
OTOF-203ENST00000339598 DLX4Q92988 240 aaPredicted RBP10.03□□□□□ -0.8
OTOF-203ENST00000339598 CHAC1Q9BUX1 264 aa10.03□□□□□ -0.8
OTOF-203ENST00000339598 C11orf68Q9H3H3 251 aaKnown RBP10.03□□□□□ -0.8
OTOF-203ENST00000339598 PHLDA1Q8WV24 401 aaPredicted RBP10.03□□□□□ -0.8
OTOF-203ENST00000339598 SPXQ9BT56 116 aa10.03□□□□□ -0.8
OTOF-203ENST00000339598 ZNF134P52741 427 aa10.02□□□□□ -0.8
OTOF-203ENST00000339598 CMC4P56277 68 aaPredicted RBP10.02□□□□□ -0.8
OTOF-203ENST00000339598 CT83Q5H943 113 aa10.02□□□□□ -0.8
OTOF-203ENST00000339598 FAM104BQ5XKR9 115 aa10.02□□□□□ -0.8
OTOF-203ENST00000339598 NOTCH4Q99466 2003 aa10.02□□□□□ -0.81
OTOF-203ENST00000339598 RPL35AP18077 110 aaKnown RBP10.02□□□□□ -0.81
OTOF-203ENST00000339598 IL15RAQ13261 267 aa10.02□□□□□ -0.81
OTOF-203ENST00000339598 KLHL30-AS1Q8NEE0 82 aa10.02□□□□□ -0.81
OTOF-203ENST00000339598 SNHG12Q9BXW3 62 aa10.02□□□□□ -0.81
OTOF-203ENST00000339598 OTOGLQ3ZCN5 2332 aa10.02□□□□□ -0.81
OTOF-203ENST00000339598 DEFB131AP59861 70 aa10.02□□□□□ -0.81
OTOF-203ENST00000339598 RASL10AQ92737 203 aa10.02□□□□□ -0.81
OTOF-203ENST00000339598 NCOR1P1Q9H4R4 102 aa10.02□□□□□ -0.81
OTOF-203ENST00000339598 IGLV3-9A0A075B6K5 115 aa10.02□□□□□ -0.81
OTOF-203ENST00000339598 ESDP10768 282 aa10.02□□□□□ -0.81
OTOF-203ENST00000339598 SLAQ13239 276 aa10.02□□□□□ -0.81
OTOF-203ENST00000339598 C6orf226Q5I0X4 101 aa10.02□□□□□ -0.81
OTOF-203ENST00000339598 LY6G5BQ8NDX9 201 aa10.02□□□□□ -0.81
OTOF-203ENST00000339598 MYLKQ15746 1914 aa10.01□□□□□ -0.81
OTOF-203ENST00000339598 Q8TCH9 128 aa10.01□□□□□ -0.81
OTOF-203ENST00000339598 KNCNA6PVL3 124 aa10.01□□□□□ -0.81
OTOF-203ENST00000339598 C15orf65H3BRN8 121 aa10.01□□□□□ -0.81
OTOF-203ENST00000339598 DKK1O94907 266 aa10.01□□□□□ -0.81
OTOF-203ENST00000339598 DTX2Q86UW9 622 aa10.01□□□□□ -0.81
OTOF-203ENST00000339598 PRIMA1Q86XR5 153 aa10.01□□□□□ -0.81
OTOF-203ENST00000339598 GTSF1LQ9H1H1 148 aa10.01□□□□□ -0.81
OTOF-203ENST00000339598 V9GYV3 84 aa10.01□□□□□ -0.81
OTOF-203ENST00000339598 FNDC1Q4ZHG4 1894 aaPredicted RBP10.01□□□□□ -0.81
OTOF-203ENST00000339598 UBE2E1P51965 193 aa10.01□□□□□ -0.81
OTOF-203ENST00000339598 OCIAD2Q56VL3 154 aa10.01□□□□□ -0.81
OTOF-203ENST00000339598 C2orf82Q6UX34 121 aa10.01□□□□□ -0.81
OTOF-203ENST00000339598 ZNF833PQ6ZTB9 187 aa10.01□□□□□ -0.81
OTOF-203ENST00000339598 IL17RELQ6ZVW7 336 aa10.01□□□□□ -0.81
OTOF-203ENST00000339598 CST9LQ9H4G1 147 aa10.01□□□□□ -0.81
OTOF-203ENST00000339598 SIP14410 1827 aa10.01□□□□□ -0.81
OTOF-203ENST00000339598 IGHV2-5P01817 119 aa10.01□□□□□ -0.81
OTOF-203ENST00000339598 MRPL52Q86TS9 123 aaKnown RBP10.01□□□□□ -0.81
OTOF-203ENST00000339598 TPSG1Q9NRR2 321 aa10.01□□□□□ -0.81
OTOF-203ENST00000339598 COX11Q9Y6N1 276 aa10.01□□□□□ -0.81
OTOF-203ENST00000339598 HELZP42694 1942 aaKnown RBP10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms