RNA–Protein interactions for RNA: ENST00000339438.10

CSDE1-202, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,006 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-202ENST00000339438 PPIFP30405 207 aaKnown RBP4.43□□□□□ -1.7
CSDE1-202ENST00000339438 KRTAP21-3Q3LHN1 58 aa4.43□□□□□ -1.7
CSDE1-202ENST00000339438 GAGE13Q4V321 117 aa4.43□□□□□ -1.7
CSDE1-202ENST00000339438 PATE2Q6UY27 113 aa4.43□□□□□ -1.7
CSDE1-202ENST00000339438 OR10X1Q8NGY0 326 aa4.43□□□□□ -1.7
CSDE1-202ENST00000339438 COQ2Q96H96 371 aa4.43□□□□□ -1.7
CSDE1-202ENST00000339438 HSD17B10Q99714 261 aaKnown RBP4.43□□□□□ -1.7
CSDE1-202ENST00000339438 CHAC1Q9BUX1 264 aa4.43□□□□□ -1.7
CSDE1-202ENST00000339438 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.43□□□□□ -1.7
CSDE1-202ENST00000339438 NGFP01138 241 aa4.43□□□□□ -1.7
CSDE1-202ENST00000339438 IFI27P40305 119 aaPredicted RBP4.43□□□□□ -1.7
CSDE1-202ENST00000339438 CACNG7P62955 275 aa4.43□□□□□ -1.7
CSDE1-202ENST00000339438 CATR1Q13166 79 aa4.43□□□□□ -1.7
CSDE1-202ENST00000339438 SBSPONQ8IVN8 264 aa4.43□□□□□ -1.7
CSDE1-202ENST00000339438 SMIM20Q8N5G0 67 aa4.43□□□□□ -1.7
CSDE1-202ENST00000339438 PGLYRP4Q96LB8 373 aa4.43□□□□□ -1.7
CSDE1-202ENST00000339438 FOXB1Q99853 325 aa4.43□□□□□ -1.7
CSDE1-202ENST00000339438 PKIBQ9C010 78 aa4.43□□□□□ -1.7
CSDE1-202ENST00000339438 TMEM14BQ9NUH8 114 aa4.43□□□□□ -1.7
CSDE1-202ENST00000339438 AP5S1Q9NUS5 200 aa4.43□□□□□ -1.7
CSDE1-202ENST00000339438 ZNF492Q9P255 531 aa4.43□□□□□ -1.7
CSDE1-202ENST00000339438 DKK2Q9UBU2 259 aa4.43□□□□□ -1.7
CSDE1-202ENST00000339438 MBD3L4A6NDZ8 208 aaPredicted RBP4.42□□□□□ -1.7
CSDE1-202ENST00000339438 MBD3L3A6NE82 208 aaPredicted RBP4.42□□□□□ -1.7
CSDE1-202ENST00000339438 PRSS29PA6NIE9 313 aa4.42□□□□□ -1.7
CSDE1-202ENST00000339438 MBD3L5A6NJ08 208 aaPredicted RBP4.42□□□□□ -1.7
CSDE1-202ENST00000339438 ID1P41134 155 aa4.42□□□□□ -1.7
CSDE1-202ENST00000339438 HOXA4Q00056 320 aaPredicted RBP4.42□□□□□ -1.7
CSDE1-202ENST00000339438 RBPMS2Q6ZRY4 209 aaKnown RBP4.42□□□□□ -1.7
CSDE1-202ENST00000339438 MBD3L2Q8NHZ7 208 aaPredicted RBP4.42□□□□□ -1.7
CSDE1-202ENST00000339438 PRELID3AQ96N28 172 aa4.42□□□□□ -1.7
CSDE1-202ENST00000339438 F11RQ9Y624 299 aaKnown RBP4.42□□□□□ -1.7
CSDE1-202ENST00000339438 HIVEP1P15822 2718 aa4.42□□□□□ -1.7
CSDE1-202ENST00000339438 RHODO00212 210 aa4.42□□□□□ -1.7
CSDE1-202ENST00000339438 MOSP00540 346 aa4.42□□□□□ -1.7
CSDE1-202ENST00000339438 IGLV2-11P01706 119 aa4.42□□□□□ -1.7
CSDE1-202ENST00000339438 C8orf88P0DMB2 117 aa4.42□□□□□ -1.7
CSDE1-202ENST00000339438 PYYP10082 97 aa4.42□□□□□ -1.7
CSDE1-202ENST00000339438 HOXB4P17483 251 aaPredicted RBP4.42□□□□□ -1.7
CSDE1-202ENST00000339438 GPR12P47775 334 aa4.42□□□□□ -1.7
CSDE1-202ENST00000339438 ZNF137PP52743 207 aa4.42□□□□□ -1.7
CSDE1-202ENST00000339438 GNG5P63218 68 aa4.42□□□□□ -1.7
CSDE1-202ENST00000339438 C12orf74Q32Q52 190 aa4.42□□□□□ -1.7
CSDE1-202ENST00000339438 RND1Q92730 232 aa4.42□□□□□ -1.7
CSDE1-202ENST00000339438 C15orf65H3BRN8 121 aa4.42□□□□□ -1.7
CSDE1-202ENST00000339438 PF4V1P10720 104 aa4.42□□□□□ -1.7
CSDE1-202ENST00000339438 HLA-DRB4P13762 266 aa4.42□□□□□ -1.7
CSDE1-202ENST00000339438 MYOD1P15172 320 aa4.42□□□□□ -1.7
CSDE1-202ENST00000339438 CACNA1DQ01668 2161 aa4.42□□□□□ -1.7
CSDE1-202ENST00000339438 MLANAQ16655 118 aa4.42□□□□□ -1.7
CSDE1-202ENST00000339438 UTF1Q5T230 341 aa4.42□□□□□ -1.7
CSDE1-202ENST00000339438 ZNF575Q86XF7 245 aa4.42□□□□□ -1.7
CSDE1-202ENST00000339438 MAPKAPK5-AS1Q8N8E1 139 aa4.42□□□□□ -1.7
CSDE1-202ENST00000339438 TMEM140Q9NV12 185 aa4.42□□□□□ -1.7
CSDE1-202ENST00000339438 NHP2Q9NX24 153 aaKnown RBP4.42□□□□□ -1.7
CSDE1-202ENST00000339438 FZR1Q9UM11 496 aa4.42□□□□□ -1.7
CSDE1-202ENST00000339438 HLA-DRB4X5D2U9 266 aa4.42□□□□□ -1.7
CSDE1-202ENST00000339438 SACSQ9NZJ4 4579 aa4.41□□□□□ -1.7
CSDE1-202ENST00000339438 TRBV7-3A0A075B6L6 115 aa4.41□□□□□ -1.7
CSDE1-202ENST00000339438 C15orf61A6NNL5 157 aa4.41□□□□□ -1.7
CSDE1-202ENST00000339438 NDUFS7O75251 213 aa4.41□□□□□ -1.7
CSDE1-202ENST00000339438 APOMO95445 188 aa4.41□□□□□ -1.7
CSDE1-202ENST00000339438 GCSHP23434 173 aa4.41□□□□□ -1.7
CSDE1-202ENST00000339438 MPV17P39210 176 aa4.41□□□□□ -1.7
CSDE1-202ENST00000339438 RRN3P1Q2M238 152 aa4.41□□□□□ -1.7
CSDE1-202ENST00000339438 ZNF493Q6ZR52 646 aa4.41□□□□□ -1.7
CSDE1-202ENST00000339438 OR9G1Q8NH87 305 aa4.41□□□□□ -1.7
CSDE1-202ENST00000339438 HARBI1Q96MB7 349 aa4.41□□□□□ -1.7
CSDE1-202ENST00000339438 ANAPC13Q9BS18 74 aa4.41□□□□□ -1.7
CSDE1-202ENST00000339438 VPREB3Q9UKI3 123 aa4.41□□□□□ -1.7
CSDE1-202ENST00000339438 FABP5P3A8MUU1 101 aa4.41□□□□□ -1.7
CSDE1-202ENST00000339438 CSN3P07498 182 aa4.41□□□□□ -1.7
CSDE1-202ENST00000339438 PRTN3P24158 256 aa4.41□□□□□ -1.7
CSDE1-202ENST00000339438 FOXA2Q9Y261 457 aaPredicted RBP4.41□□□□□ -1.7
CSDE1-202ENST00000339438 IGKV3D-15A0A087WSY6 115 aa4.41□□□□□ -1.7
CSDE1-202ENST00000339438 CENPVL3A0A0U1RRI6 287 aa4.41□□□□□ -1.7
CSDE1-202ENST00000339438 ZNF134P52741 427 aa4.41□□□□□ -1.7
CSDE1-202ENST00000339438 GFRALQ6UXV0 394 aa4.41□□□□□ -1.7
CSDE1-202ENST00000339438 C9orf106Q8NAJ2 232 aa4.41□□□□□ -1.7
CSDE1-202ENST00000339438 TMEM158Q8WZ71 300 aa4.41□□□□□ -1.7
CSDE1-202ENST00000339438 KIR2DL4Q99706 377 aa4.41□□□□□ -1.7
CSDE1-202ENST00000339438 HIVEP3Q5T1R4 2406 aa4.41□□□□□ -1.7
CSDE1-202ENST00000339438 ZNF462Q96JM2 2506 aa4.41□□□□□ -1.7
CSDE1-202ENST00000339438 IGKV1D-37A0A075B6S9 117 aa4.4□□□□□ -1.7
CSDE1-202ENST00000339438 TEX50A0A1B0GTY4 177 aa4.4□□□□□ -1.7
CSDE1-202ENST00000339438 NMUP48645 174 aa4.4□□□□□ -1.7
CSDE1-202ENST00000339438 SGK494Q96LW2 274 aa4.4□□□□□ -1.7
CSDE1-202ENST00000339438 SRSF8Q9BRL6 282 aaKnown RBP4.4□□□□□ -1.7
CSDE1-202ENST00000339438 A0A1B0GW15 77 aa4.4□□□□□ -1.71
CSDE1-202ENST00000339438 SHISA9B4DS77 424 aa4.4□□□□□ -1.71
CSDE1-202ENST00000339438 CNIH1O95406 144 aa4.4□□□□□ -1.71
CSDE1-202ENST00000339438 ARMS2P0C7Q2 107 aa4.4□□□□□ -1.71
CSDE1-202ENST00000339438 EVI2AP22794 236 aa4.4□□□□□ -1.71
CSDE1-202ENST00000339438 FXYD7P58549 80 aa4.4□□□□□ -1.71
CSDE1-202ENST00000339438 ALKBH6Q3KRA9 238 aa4.4□□□□□ -1.71
CSDE1-202ENST00000339438 OR8A1Q8NGG7 326 aa4.4□□□□□ -1.71
CSDE1-202ENST00000339438 RFESDQ8TAC1 157 aa4.4□□□□□ -1.71
CSDE1-202ENST00000339438 HINT2Q9BX68 163 aa4.4□□□□□ -1.71
CSDE1-202ENST00000339438 MRPL32Q9BYC8 188 aaKnown RBP4.4□□□□□ -1.71
CSDE1-202ENST00000339438 PPDPFQ9H3Y8 114 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms