RNA–Protein interactions for RNA: ENST00000338969.9

TRIM9-202, Transcript of tripartite motif containing 9, humanhuman

TSL 2 BASIC

Gene TRIM9, Length 3,312 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM9-202ENST00000338969 D6R8Y8 96 aa12.93□□□□□ -0.34
TRIM9-202ENST00000338969 RELQ04864 619 aaPredicted RBP12.93□□□□□ -0.34
TRIM9-202ENST00000338969 C5orf64Q2M2E5 130 aa12.93□□□□□ -0.34
TRIM9-202ENST00000338969 ARPC1AQ92747 370 aa12.93□□□□□ -0.34
TRIM9-202ENST00000338969 LINC00527Q9UJ94 153 aa12.93□□□□□ -0.34
TRIM9-202ENST00000338969 MSRB2Q9Y3D2 182 aa12.93□□□□□ -0.34
TRIM9-202ENST00000338969 TMEM189A5PLL7 270 aa12.93□□□□□ -0.34
TRIM9-202ENST00000338969 H3BRN7 92 aa12.93□□□□□ -0.34
TRIM9-202ENST00000338969 ORM1P02763 201 aa12.93□□□□□ -0.34
TRIM9-202ENST00000338969 GPR183P32249 361 aa12.93□□□□□ -0.34
TRIM9-202ENST00000338969 KLRB1Q12918 225 aa12.93□□□□□ -0.34
TRIM9-202ENST00000338969 ZNF414Q96IQ9 312 aa12.93□□□□□ -0.34
TRIM9-202ENST00000338969 C21orf62Q9NYP8 219 aa12.93□□□□□ -0.34
TRIM9-202ENST00000338969 LRRK2Q5S007 2527 aa12.92□□□□□ -0.34
TRIM9-202ENST00000338969 OR5AL1P0C617 328 aa12.92□□□□□ -0.34
TRIM9-202ENST00000338969 MFAP4P55083 255 aa12.92□□□□□ -0.34
TRIM9-202ENST00000338969 PSG3Q16557 428 aa12.92□□□□□ -0.34
TRIM9-202ENST00000338969 UQCRFS1P47985 274 aa12.92□□□□□ -0.34
TRIM9-202ENST00000338969 PLP1P60201 277 aa12.91□□□□□ -0.34
TRIM9-202ENST00000338969 FOXE3Q13461 319 aa12.91□□□□□ -0.34
TRIM9-202ENST00000338969 C18orf15Q96N68 181 aa12.91□□□□□ -0.34
TRIM9-202ENST00000338969 VGLL1Q99990 258 aa12.91□□□□□ -0.34
TRIM9-202ENST00000338969 CCL25O15444 150 aa12.91□□□□□ -0.34
TRIM9-202ENST00000338969 ERCC8Q13216 396 aa12.91□□□□□ -0.34
TRIM9-202ENST00000338969 FANCD2OSQ96PS1 177 aa12.91□□□□□ -0.34
TRIM9-202ENST00000338969 C1RLQ9NZP8 487 aa12.91□□□□□ -0.34
TRIM9-202ENST00000338969 SH2D1AO60880 128 aa12.91□□□□□ -0.34
TRIM9-202ENST00000338969 CEACAM3P40198 252 aa12.91□□□□□ -0.34
TRIM9-202ENST00000338969 TWIST1Q15672 202 aa12.91□□□□□ -0.34
TRIM9-202ENST00000338969 RNF182Q8N6D2 247 aa12.91□□□□□ -0.34
TRIM9-202ENST00000338969 SLC25A34Q6PIV7 304 aa12.9□□□□□ -0.34
TRIM9-202ENST00000338969 VMO1Q7Z5L0 202 aa12.9□□□□□ -0.34
TRIM9-202ENST00000338969 NAA38Q9BRA0 125 aaKnown RBP12.9□□□□□ -0.34
TRIM9-202ENST00000338969 UTP20O75691 2785 aaKnown RBP12.9□□□□□ -0.34
TRIM9-202ENST00000338969 USP9XQ93008 2570 aaPredicted RBP12.9□□□□□ -0.34
TRIM9-202ENST00000338969 NHLH1Q02575 133 aa12.9□□□□□ -0.34
TRIM9-202ENST00000338969 RNF151Q2KHN1 245 aa12.9□□□□□ -0.34
TRIM9-202ENST00000338969 MSRB1Q9NZV6 116 aa12.9□□□□□ -0.34
TRIM9-202ENST00000338969 ITPR1Q14643 2758 aa12.9□□□□□ -0.34
TRIM9-202ENST00000338969 CT83Q5H943 113 aa12.89□□□□□ -0.35
TRIM9-202ENST00000338969 PVRIGQ6DKI7 326 aa12.89□□□□□ -0.35
TRIM9-202ENST00000338969 LY6LH3BQJ8 138 aa12.89□□□□□ -0.35
TRIM9-202ENST00000338969 TMEM14CQ9P0S9 112 aa12.89□□□□□ -0.35
TRIM9-202ENST00000338969 ZNF738Q8NE65 137 aa12.88□□□□□ -0.35
TRIM9-202ENST00000338969 NEU4Q8WWR8 484 aaPredicted RBP12.88□□□□□ -0.35
TRIM9-202ENST00000338969 CHCHD1Q96BP2 118 aaKnown RBP12.88□□□□□ -0.35
TRIM9-202ENST00000338969 PRELID3AQ96N28 172 aa12.88□□□□□ -0.35
TRIM9-202ENST00000338969 NOTCH3Q9UM47 2321 aa12.88□□□□□ -0.35
TRIM9-202ENST00000338969 A0A1W2PPR1 153 aa12.88□□□□□ -0.35
TRIM9-202ENST00000338969 HAX1O00165 279 aa12.88□□□□□ -0.35
TRIM9-202ENST00000338969 EVI2AP22794 236 aa12.88□□□□□ -0.35
TRIM9-202ENST00000338969 FAM162BQ5T6X4 162 aa12.88□□□□□ -0.35
TRIM9-202ENST00000338969 CFHR4Q92496 578 aa12.88□□□□□ -0.35
TRIM9-202ENST00000338969 ZFP36P26651 326 aaKnown RBP12.88□□□□□ -0.35
TRIM9-202ENST00000338969 HSPB8Q9UJY1 196 aa12.88□□□□□ -0.35
TRIM9-202ENST00000338969 SOX21Q9Y651 276 aaPredicted RBP12.88□□□□□ -0.35
TRIM9-202ENST00000338969 IGKV3-7A0A075B6H7 116 aa12.87□□□□□ -0.35
TRIM9-202ENST00000338969 G3V318 75 aa12.87□□□□□ -0.35
TRIM9-202ENST00000338969 SPRY2O43597 315 aa12.87□□□□□ -0.35
TRIM9-202ENST00000338969 CKS2P33552 79 aa12.87□□□□□ -0.35
TRIM9-202ENST00000338969 ZNF80P51504 273 aaPredicted RBP12.87□□□□□ -0.35
TRIM9-202ENST00000338969 OR4C5Q8NGB2 326 aa12.87□□□□□ -0.35
TRIM9-202ENST00000338969 ABCA12Q86UK0 2595 aa12.87□□□□□ -0.35
TRIM9-202ENST00000338969 SETD2Q9BYW2 2564 aaPredicted RBP12.87□□□□□ -0.35
TRIM9-202ENST00000338969 TM4SF20Q53R12 229 aa12.87□□□□□ -0.35
TRIM9-202ENST00000338969 NDFIP1Q9BT67 221 aa12.87□□□□□ -0.35
TRIM9-202ENST00000338969 GFRA4Q9GZZ7 299 aa12.87□□□□□ -0.35
TRIM9-202ENST00000338969 MRPS16Q9Y3D3 137 aaKnown RBP12.87□□□□□ -0.35
TRIM9-202ENST00000338969 CFAP46Q8IYW2 2715 aa12.86□□□□□ -0.35
TRIM9-202ENST00000338969 PRAC2D3DTV9 90 aa12.86□□□□□ -0.35
TRIM9-202ENST00000338969 EGR2P11161 476 aaPredicted RBP12.86□□□□□ -0.35
TRIM9-202ENST00000338969 CACNG7P62955 275 aa12.86□□□□□ -0.35
TRIM9-202ENST00000338969 SMIM12Q96EX1 92 aa12.86□□□□□ -0.35
TRIM9-202ENST00000338969 COX11Q9Y6N1 276 aa12.86□□□□□ -0.35
TRIM9-202ENST00000338969 SORL1Q92673 2214 aa12.86□□□□□ -0.35
TRIM9-202ENST00000338969 NPIPB6E9PJ23 425 aa12.86□□□□□ -0.35
TRIM9-202ENST00000338969 GAS8-AS1O95177 125 aa12.86□□□□□ -0.35
TRIM9-202ENST00000338969 TMEM219Q86XT9 240 aa12.86□□□□□ -0.35
TRIM9-202ENST00000338969 LINC01548A6NM66 108 aa12.85□□□□□ -0.35
TRIM9-202ENST00000338969 CLEC19AQ6UXS0 136 aa12.85□□□□□ -0.35
TRIM9-202ENST00000338969 OR10AG1Q8NH19 301 aa12.85□□□□□ -0.35
TRIM9-202ENST00000338969 CLEC3BP05452 202 aa12.85□□□□□ -0.35
TRIM9-202ENST00000338969 GATA1P15976 413 aaPredicted RBP12.85□□□□□ -0.35
TRIM9-202ENST00000338969 SIGLEC8Q9NYZ4 499 aa12.85□□□□□ -0.35
TRIM9-202ENST00000338969 C15orf32Q32M92 178 aa12.85□□□□□ -0.35
TRIM9-202ENST00000338969 RABAC1Q9UI14 185 aa12.85□□□□□ -0.35
TRIM9-202ENST00000338969 PTPN13Q12923 2485 aa12.84□□□□□ -0.35
TRIM9-202ENST00000338969 IGLV11-55A0A075B6I3 123 aa12.84□□□□□ -0.35
TRIM9-202ENST00000338969 PRTN3P24158 256 aa12.84□□□□□ -0.35
TRIM9-202ENST00000338969 MRPL52Q86TS9 123 aaKnown RBP12.84□□□□□ -0.35
TRIM9-202ENST00000338969 GAGE1Q13065 139 aa12.84□□□□□ -0.35
TRIM9-202ENST00000338969 PRSS57Q6UWY2 283 aa12.84□□□□□ -0.35
TRIM9-202ENST00000338969 RNASE8Q8TDE3 154 aaKnown RBP12.84□□□□□ -0.35
TRIM9-202ENST00000338969 F8W735 103 aaPredicted RBP12.83□□□□□ -0.35
TRIM9-202ENST00000338969 NPYP01303 97 aa12.83□□□□□ -0.35
TRIM9-202ENST00000338969 RPL7P18124 248 aaKnown RBP12.83□□□□□ -0.35
TRIM9-202ENST00000338969 NMUP48645 174 aa12.83□□□□□ -0.35
TRIM9-202ENST00000338969 MRPL51Q4U2R6 128 aaKnown RBP12.83□□□□□ -0.35
TRIM9-202ENST00000338969 ZNF562Q6V9R5 426 aa12.83□□□□□ -0.35
TRIM9-202ENST00000338969 VPS13CQ709C8 3753 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms