RNA–Protein interactions for RNA: ENST00000338193.10

PRIM1-201, Transcript of DNA primase subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRIM1, Length 1,393 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-201ENST00000338193 MAP1LC3B2A6NCE7 125 aa9.24□□□□□ -0.93
PRIM1-201ENST00000338193 MEOX2P50222 304 aa9.24□□□□□ -0.93
PRIM1-201ENST00000338193 TAS2R45P59539 299 aa9.24□□□□□ -0.93
PRIM1-201ENST00000338193 RANP62826 216 aaKnown RBP9.24□□□□□ -0.93
PRIM1-201ENST00000338193 EIF5AP63241 154 aaKnown RBP9.24□□□□□ -0.93
PRIM1-201ENST00000338193 CCL20P78556 96 aa9.24□□□□□ -0.93
PRIM1-201ENST00000338193 TNP2Q05952 138 aa9.24□□□□□ -0.93
PRIM1-201ENST00000338193 ICAM4Q14773 271 aa9.24□□□□□ -0.93
PRIM1-201ENST00000338193 PSG3Q16557 428 aa9.24□□□□□ -0.93
PRIM1-201ENST00000338193 SUN5Q8TC36 379 aa9.24□□□□□ -0.93
PRIM1-201ENST00000338193 ASCL2Q99929 193 aa9.24□□□□□ -0.93
PRIM1-201ENST00000338193 MAP1LC3BQ9GZQ8 125 aa9.24□□□□□ -0.93
PRIM1-201ENST00000338193 IGKV3-20P01619 116 aa9.24□□□□□ -0.93
PRIM1-201ENST00000338193 SNRPD3P62318 126 aaKnown RBP9.24□□□□□ -0.93
PRIM1-201ENST00000338193 PQLC2Q6ZP29 291 aa9.24□□□□□ -0.93
PRIM1-201ENST00000338193 IQCF2Q8IXL9 164 aa9.24□□□□□ -0.93
PRIM1-201ENST00000338193 ZNF738Q8NE65 137 aa9.24□□□□□ -0.93
PRIM1-201ENST00000338193 LRRC20Q8TCA0 184 aa9.24□□□□□ -0.93
PRIM1-201ENST00000338193 PCNPQ8WW12 178 aaKnown RBP9.24□□□□□ -0.93
PRIM1-201ENST00000338193 MBD3L1Q8WWY6 194 aa9.24□□□□□ -0.93
PRIM1-201ENST00000338193 FAM110AQ9BQ89 295 aa9.24□□□□□ -0.93
PRIM1-201ENST00000338193 Q9H3A6 140 aa9.24□□□□□ -0.93
PRIM1-201ENST00000338193 YTHDF2Q9Y5A9 579 aaKnown RBP9.24□□□□□ -0.93
PRIM1-201ENST00000338193 A0A0J9YX75 114 aa9.23□□□□□ -0.93
PRIM1-201ENST00000338193 A8MZ25 164 aa9.23□□□□□ -0.93
PRIM1-201ENST00000338193 UMAD1C9J7I0 102 aa9.23□□□□□ -0.93
PRIM1-201ENST00000338193 H3BMM0 161 aa9.23□□□□□ -0.93
PRIM1-201ENST00000338193 ZNF253O75346 499 aa9.23□□□□□ -0.93
PRIM1-201ENST00000338193 CXorf1O96002 111 aa9.23□□□□□ -0.93
PRIM1-201ENST00000338193 GIG44P09565 113 aaPredicted RBP9.23□□□□□ -0.93
PRIM1-201ENST00000338193 ID1P41134 155 aa9.23□□□□□ -0.93
PRIM1-201ENST00000338193 UBE2G2P60604 165 aa9.23□□□□□ -0.93
PRIM1-201ENST00000338193 GUK1Q16774 197 aa9.23□□□□□ -0.93
PRIM1-201ENST00000338193 TRPT1Q86TN4 253 aaKnown RBP9.23□□□□□ -0.93
PRIM1-201ENST00000338193 SBSPONQ8IVN8 264 aa9.23□□□□□ -0.93
PRIM1-201ENST00000338193 SFT2D1Q8WV19 159 aa9.23□□□□□ -0.93
PRIM1-201ENST00000338193 SLC50A1Q9BRV3 221 aa9.23□□□□□ -0.93
PRIM1-201ENST00000338193 SAV1Q9H4B6 383 aaPredicted RBP9.23□□□□□ -0.93
PRIM1-201ENST00000338193 TUBA4BQ9H853 241 aa9.23□□□□□ -0.93
PRIM1-201ENST00000338193 RNF24Q9Y225 148 aa9.23□□□□□ -0.93
PRIM1-201ENST00000338193 IGKV2-40A0A087WW87 121 aaPredicted RBP9.22□□□□□ -0.93
PRIM1-201ENST00000338193 GGTLC3B5MD39 225 aa9.22□□□□□ -0.93
PRIM1-201ENST00000338193 IGKV2D-40P01614 121 aaPredicted RBP9.22□□□□□ -0.93
PRIM1-201ENST00000338193 HLA-DRB4P13762 266 aa9.22□□□□□ -0.93
PRIM1-201ENST00000338193 C4BPBP20851 252 aa9.22□□□□□ -0.93
PRIM1-201ENST00000338193 FXYD7P58549 80 aa9.22□□□□□ -0.93
PRIM1-201ENST00000338193 GNG5P63218 68 aa9.22□□□□□ -0.93
PRIM1-201ENST00000338193 ERCC8Q13216 396 aa9.22□□□□□ -0.93
PRIM1-201ENST00000338193 PDE6HQ13956 83 aa9.22□□□□□ -0.93
PRIM1-201ENST00000338193 LCE1DQ5T752 114 aa9.22□□□□□ -0.93
PRIM1-201ENST00000338193 RPUSD4Q96CM3 377 aaKnown RBP9.22□□□□□ -0.93
PRIM1-201ENST00000338193 RETNQ9HD89 108 aa9.22□□□□□ -0.93
PRIM1-201ENST00000338193 HLA-DRB4X5D2U9 266 aa9.22□□□□□ -0.93
PRIM1-201ENST00000338193 HAGHQ16775 308 aa9.21□□□□□ -0.94
PRIM1-201ENST00000338193 AMTNQ6UX39 209 aa9.21□□□□□ -0.94
PRIM1-201ENST00000338193 DPPA3Q6W0C5 159 aa9.21□□□□□ -0.94
PRIM1-201ENST00000338193 FOXI2Q6ZQN5 318 aa9.21□□□□□ -0.94
PRIM1-201ENST00000338193 SLC35B3Q9H1N7 401 aa9.21□□□□□ -0.94
PRIM1-201ENST00000338193 PGPA6NDG6 321 aa9.2□□□□□ -0.94
PRIM1-201ENST00000338193 ZNF705EA8MWA4 302 aaPredicted RBP9.2□□□□□ -0.94
PRIM1-201ENST00000338193 FAM229AH3BQW9 127 aa9.2□□□□□ -0.94
PRIM1-201ENST00000338193 CNN1P51911 297 aaKnown RBP9.2□□□□□ -0.94
PRIM1-201ENST00000338193 IFITM2Q01629 132 aa9.2□□□□□ -0.94
PRIM1-201ENST00000338193 HIST1H1AQ02539 215 aaPredicted RBP9.2□□□□□ -0.94
PRIM1-201ENST00000338193 KIR3DS1Q14943 382 aa9.2□□□□□ -0.94
PRIM1-201ENST00000338193 TEX261Q6UWH6 196 aa9.2□□□□□ -0.94
PRIM1-201ENST00000338193 OR4B1Q8NGF8 309 aa9.2□□□□□ -0.94
PRIM1-201ENST00000338193 OR8A1Q8NGG7 326 aa9.2□□□□□ -0.94
PRIM1-201ENST00000338193 VGLL1Q99990 258 aa9.2□□□□□ -0.94
PRIM1-201ENST00000338193 RPH3ALQ9UNE2 315 aa9.2□□□□□ -0.94
PRIM1-201ENST00000338193 LOC102724200A0A096LPH7 203 aaPredicted RBP9.19□□□□□ -0.94
PRIM1-201ENST00000338193 FAM74A7A6NL05 159 aa9.19□□□□□ -0.94
PRIM1-201ENST00000338193 A8MTW9 85 aa9.19□□□□□ -0.94
PRIM1-201ENST00000338193 ATP5G3P48201 142 aa9.19□□□□□ -0.94
PRIM1-201ENST00000338193 RAB5CP51148 216 aa9.19□□□□□ -0.94
PRIM1-201ENST00000338193 CMC4P56277 68 aaPredicted RBP9.19□□□□□ -0.94
PRIM1-201ENST00000338193 PSG9Q00887 426 aa9.19□□□□□ -0.94
PRIM1-201ENST00000338193 EIF5AL1Q6IS14 154 aaKnown RBP9.19□□□□□ -0.94
PRIM1-201ENST00000338193 STHQ8IWL8 128 aa9.19□□□□□ -0.94
PRIM1-201ENST00000338193 ZNF680Q8NEM1 530 aa9.19□□□□□ -0.94
PRIM1-201ENST00000338193 CLEC5AQ9NY25 188 aa9.19□□□□□ -0.94
PRIM1-201ENST00000338193 TENM3Q9P273 2699 aa9.18□□□□□ -0.94
PRIM1-201ENST00000338193 NBEAL2Q6ZNJ1 2754 aa9.18□□□□□ -0.94
PRIM1-201ENST00000338193 PAGE4O60829 102 aa9.18□□□□□ -0.94
PRIM1-201ENST00000338193 SUMO1P63165 101 aaKnown RBP9.18□□□□□ -0.94
PRIM1-201ENST00000338193 SAMD13Q5VXD3 122 aa9.18□□□□□ -0.94
PRIM1-201ENST00000338193 SGK494Q96LW2 274 aa9.18□□□□□ -0.94
PRIM1-201ENST00000338193 OTORQ9NRC9 128 aa9.18□□□□□ -0.94
PRIM1-201ENST00000338193 TMEM167BQ9NRX6 74 aa9.18□□□□□ -0.94
PRIM1-201ENST00000338193 TRAV8-1A0A0A6YYK1 113 aa9.17□□□□□ -0.94
PRIM1-201ENST00000338193 TRAV1-1A0A0B4J248 108 aa9.17□□□□□ -0.94
PRIM1-201ENST00000338193 DIRC3C9JPN6 131 aa9.17□□□□□ -0.94
PRIM1-201ENST00000338193 NPIPB6E9PJ23 425 aa9.17□□□□□ -0.94
PRIM1-201ENST00000338193 TEX46H3BTG2 121 aa9.17□□□□□ -0.94
PRIM1-201ENST00000338193 M0R2Z0 102 aa9.17□□□□□ -0.94
PRIM1-201ENST00000338193 CT45A10P0DMU9 189 aa9.17□□□□□ -0.94
PRIM1-201ENST00000338193 EBLN2Q6P2I7 272 aa9.17□□□□□ -0.94
PRIM1-201ENST00000338193 LYPD1Q8N2G4 141 aa9.17□□□□□ -0.94
PRIM1-201ENST00000338193 Q8TAT8 98 aa9.17□□□□□ -0.94
PRIM1-201ENST00000338193 B9D2Q9BPU9 175 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms