RNA–Protein interactions for RNA: ENST00000334841.10

CMC1-201, Transcript of C-X9-C motif containing 1, humanhuman

TSL 3

Gene CMC1, Length 724 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-201ENST00000334841 ARL2-SNX15V9GYD0 113 aa11.22□□□□□ -0.61
CMC1-201ENST00000334841 PGPA6NDG6 321 aa11.21□□□□□ -0.61
CMC1-201ENST00000334841 PRAC2D3DTV9 90 aa11.21□□□□□ -0.61
CMC1-201ENST00000334841 F6UB75 175 aa11.21□□□□□ -0.61
CMC1-201ENST00000334841 RGS13O14921 159 aa11.21□□□□□ -0.61
CMC1-201ENST00000334841 ATP5G3P48201 142 aa11.21□□□□□ -0.61
CMC1-201ENST00000334841 PPT1P50897 306 aa11.21□□□□□ -0.61
CMC1-201ENST00000334841 DEFB125Q8N687 156 aa11.21□□□□□ -0.61
CMC1-201ENST00000334841 RPUSD4Q96CM3 377 aaKnown RBP11.21□□□□□ -0.61
CMC1-201ENST00000334841 AURKAIP1Q9NWT8 199 aaPredicted RBP11.21□□□□□ -0.61
CMC1-201ENST00000334841 CLEC5AQ9NY25 188 aa11.21□□□□□ -0.61
CMC1-201ENST00000334841 PRELID1Q9Y255 219 aa11.21□□□□□ -0.61
CMC1-201ENST00000334841 KNCNA6PVL3 124 aa11.2□□□□□ -0.62
CMC1-201ENST00000334841 CMC4P56277 68 aaPredicted RBP11.2□□□□□ -0.62
CMC1-201ENST00000334841 SUMO1P63165 101 aaKnown RBP11.2□□□□□ -0.62
CMC1-201ENST00000334841 GNG5P63218 68 aa11.2□□□□□ -0.62
CMC1-201ENST00000334841 PMS2P11Q13670 270 aa11.2□□□□□ -0.62
CMC1-201ENST00000334841 CLLU1Q5K131 121 aa11.2□□□□□ -0.62
CMC1-201ENST00000334841 CST9LP1Q5W188 147 aa11.2□□□□□ -0.62
CMC1-201ENST00000334841 SAV1Q9H4B6 383 aaPredicted RBP11.2□□□□□ -0.62
CMC1-201ENST00000334841 IGKV2-40A0A087WW87 121 aaPredicted RBP11.19□□□□□ -0.62
CMC1-201ENST00000334841 A0A0J9YX75 114 aa11.19□□□□□ -0.62
CMC1-201ENST00000334841 IFNA1P01562 189 aa11.19□□□□□ -0.62
CMC1-201ENST00000334841 IGKV2D-40P01614 121 aaPredicted RBP11.19□□□□□ -0.62
CMC1-201ENST00000334841 SLC25A5P05141 298 aaKnown RBP11.19□□□□□ -0.62
CMC1-201ENST00000334841 BCL2P10415 239 aa11.19□□□□□ -0.62
CMC1-201ENST00000334841 HAGHQ16775 308 aa11.19□□□□□ -0.62
CMC1-201ENST00000334841 FOXI2Q6ZQN5 318 aa11.19□□□□□ -0.62
CMC1-201ENST00000334841 CCDC28AQ8IWP9 274 aa11.19□□□□□ -0.62
CMC1-201ENST00000334841 C5orf17Q8NAS9 161 aa11.19□□□□□ -0.62
CMC1-201ENST00000334841 RPH3ALQ9UNE2 315 aa11.19□□□□□ -0.62
CMC1-201ENST00000334841 LOC102723971A0A1B0GUV8 181 aa11.18□□□□□ -0.62
CMC1-201ENST00000334841 ZNF705DP0CH99 300 aaPredicted RBP11.18□□□□□ -0.62
CMC1-201ENST00000334841 ZNF705BP0CI00 300 aaPredicted RBP11.18□□□□□ -0.62
CMC1-201ENST00000334841 HLA-DRB4P13762 266 aa11.18□□□□□ -0.62
CMC1-201ENST00000334841 RAB14P61106 215 aa11.18□□□□□ -0.62
CMC1-201ENST00000334841 ACTL10Q5JWF8 245 aa11.18□□□□□ -0.62
CMC1-201ENST00000334841 OR8A1Q8NGG7 326 aa11.18□□□□□ -0.62
CMC1-201ENST00000334841 CMTM2Q8TAZ6 248 aa11.18□□□□□ -0.62
CMC1-201ENST00000334841 SRD5A3Q9H8P0 318 aa11.18□□□□□ -0.62
CMC1-201ENST00000334841 HLA-DRB4X5D2U9 266 aa11.18□□□□□ -0.62
CMC1-201ENST00000334841 DIRC3C9JPN6 131 aa11.17□□□□□ -0.62
CMC1-201ENST00000334841 C11orf94C9JXX5 98 aa11.17□□□□□ -0.62
CMC1-201ENST00000334841 K7EIL1 84 aa11.17□□□□□ -0.62
CMC1-201ENST00000334841 CSN1S1P47710 185 aa11.17□□□□□ -0.62
CMC1-201ENST00000334841 HIST1H1AQ02539 215 aaPredicted RBP11.17□□□□□ -0.62
CMC1-201ENST00000334841 RXFP4Q8TDU9 374 aa11.17□□□□□ -0.62
CMC1-201ENST00000334841 FAM210AQ96ND0 272 aa11.17□□□□□ -0.62
CMC1-201ENST00000334841 NKX6-2Q9C056 277 aaPredicted RBP11.17□□□□□ -0.62
CMC1-201ENST00000334841 EPDR1Q9UM22 224 aa11.17□□□□□ -0.62
CMC1-201ENST00000334841 NBEAL1Q6ZS30 2694 aa11.16□□□□□ -0.62
CMC1-201ENST00000334841 NPIPB6E9PJ23 425 aa11.16□□□□□ -0.62
CMC1-201ENST00000334841 H3BMM0 161 aa11.16□□□□□ -0.62
CMC1-201ENST00000334841 TCRAP04437 139 aa11.16□□□□□ -0.62
CMC1-201ENST00000334841 IGHV4-30-4P0DP06 118 aa11.16□□□□□ -0.62
CMC1-201ENST00000334841 CNN1P51911 297 aaKnown RBP11.16□□□□□ -0.62
CMC1-201ENST00000334841 MEF2BQ02080 365 aaPredicted RBP11.16□□□□□ -0.62
CMC1-201ENST00000334841 TOR2AQ5JU69 321 aa11.16□□□□□ -0.62
CMC1-201ENST00000334841 EBLN2Q6P2I7 272 aa11.16□□□□□ -0.62
CMC1-201ENST00000334841 GOLT1AQ6ZVE7 132 aa11.16□□□□□ -0.62
CMC1-201ENST00000334841 TRPT1Q86TN4 253 aaKnown RBP11.16□□□□□ -0.62
CMC1-201ENST00000334841 ARL6IP6Q8N6S5 226 aa11.16□□□□□ -0.62
CMC1-201ENST00000334841 RARRES2Q99969 163 aa11.16□□□□□ -0.62
CMC1-201ENST00000334841 VAX2Q9UIW0 290 aa11.16□□□□□ -0.62
CMC1-201ENST00000334841 NOTCH1P46531 2555 aa11.15□□□□□ -0.62
CMC1-201ENST00000334841 SCO2A0A1W2PP80 73 aa11.15□□□□□ -0.62
CMC1-201ENST00000334841 RBMY1BA6NDE4 496 aaKnown RBP11.15□□□□□ -0.62
CMC1-201ENST00000334841 RBMY1EA6NEQ0 496 aaKnown RBP11.15□□□□□ -0.62
CMC1-201ENST00000334841 RBFOX3A6NFN3 312 aa11.15□□□□□ -0.62
CMC1-201ENST00000334841 A8MTW9 85 aa11.15□□□□□ -0.62
CMC1-201ENST00000334841 PEX7O00628 323 aa11.15□□□□□ -0.62
CMC1-201ENST00000334841 RBMY1DP0C7P1 496 aaKnown RBP11.15□□□□□ -0.62
CMC1-201ENST00000334841 TAGLN2P37802 199 aaKnown RBP11.15□□□□□ -0.62
CMC1-201ENST00000334841 ERCC8Q13216 396 aa11.15□□□□□ -0.62
CMC1-201ENST00000334841 ZNF506Q5JVG8 444 aa11.15□□□□□ -0.62
CMC1-201ENST00000334841 STHQ8IWL8 128 aa11.15□□□□□ -0.62
CMC1-201ENST00000334841 OR10J6PQ8NGY7 276 aa11.15□□□□□ -0.62
CMC1-201ENST00000334841 VGLL1Q99990 258 aa11.15□□□□□ -0.62
CMC1-201ENST00000334841 TCEAL7Q9BRU2 100 aa11.15□□□□□ -0.62
CMC1-201ENST00000334841 ATG101Q9BSB4 218 aa11.15□□□□□ -0.62
CMC1-201ENST00000334841 RBAKDNA6NC62 111 aa11.14□□□□□ -0.63
CMC1-201ENST00000334841 IGKV3-20P01619 116 aa11.14□□□□□ -0.63
CMC1-201ENST00000334841 AMTNQ6UX39 209 aa11.14□□□□□ -0.63
CMC1-201ENST00000334841 CYB561D1Q8N8Q1 229 aa11.14□□□□□ -0.63
CMC1-201ENST00000334841 OR4B1Q8NGF8 309 aa11.14□□□□□ -0.63
CMC1-201ENST00000334841 TXNDC17Q9BRA2 123 aa11.14□□□□□ -0.63
CMC1-201ENST00000334841 TRAV8-1A0A0A6YYK1 113 aa11.13□□□□□ -0.63
CMC1-201ENST00000334841 A8MZ25 164 aa11.13□□□□□ -0.63
CMC1-201ENST00000334841 DUSP14O95147 198 aaKnown RBP11.13□□□□□ -0.63
CMC1-201ENST00000334841 RPL35AP18077 110 aaKnown RBP11.13□□□□□ -0.63
CMC1-201ENST00000334841 C9orf47Q6ZRZ4 202 aa11.13□□□□□ -0.63
CMC1-201ENST00000334841 Q8TAT8 98 aa11.13□□□□□ -0.63
CMC1-201ENST00000334841 HIST1H2BAQ96A08 127 aa11.13□□□□□ -0.63
CMC1-201ENST00000334841 C11orf52Q96A22 123 aa11.13□□□□□ -0.63
CMC1-201ENST00000334841 AGPAT4-IT1Q9H0P7 198 aa11.13□□□□□ -0.63
CMC1-201ENST00000334841 SORL1Q92673 2214 aa11.13□□□□□ -0.63
CMC1-201ENST00000334841 SERTM2A0A1B0GWG4 89 aa11.12□□□□□ -0.63
CMC1-201ENST00000334841 IGLV2-11P01706 119 aa11.12□□□□□ -0.63
CMC1-201ENST00000334841 CT45A10P0DMU9 189 aa11.12□□□□□ -0.63
CMC1-201ENST00000334841 SRSF3P84103 164 aaKnown RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 151.1 ms