RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 PRSS3P2Q8NHM4 247 aa9.65□□□□□ -0.86
VPS33B-201ENST00000333371 SCRT2Q9NQ03 307 aa9.65□□□□□ -0.86
VPS33B-201ENST00000333371 C1RLQ9NZP8 487 aa9.65□□□□□ -0.86
VPS33B-201ENST00000333371 COL12A1Q99715 3063 aa9.65□□□□□ -0.86
VPS33B-201ENST00000333371 OR2T8A6NH00 312 aa9.65□□□□□ -0.86
VPS33B-201ENST00000333371 SMKR1H3BMG3 65 aa9.65□□□□□ -0.86
VPS33B-201ENST00000333371 RIGQ13278 110 aa9.65□□□□□ -0.86
VPS33B-201ENST00000333371 BVES-AS1Q5T3Y7 98 aa9.65□□□□□ -0.86
VPS33B-201ENST00000333371 OR8A1Q8NGG7 326 aa9.65□□□□□ -0.86
VPS33B-201ENST00000333371 CFHR4Q92496 578 aa9.65□□□□□ -0.86
VPS33B-201ENST00000333371 FANCD2OSQ96PS1 177 aa9.65□□□□□ -0.86
VPS33B-201ENST00000333371 A0A096LNJ9 63 aa9.64□□□□□ -0.87
VPS33B-201ENST00000333371 HSBP1L1C9JCN9 74 aa9.64□□□□□ -0.87
VPS33B-201ENST00000333371 F8W735 103 aaPredicted RBP9.64□□□□□ -0.87
VPS33B-201ENST00000333371 TAX1BP3O14907 124 aa9.64□□□□□ -0.87
VPS33B-201ENST00000333371 VAMP3Q15836 100 aa9.64□□□□□ -0.87
VPS33B-201ENST00000333371 DYNAPQ8N1N2 210 aa9.64□□□□□ -0.87
VPS33B-201ENST00000333371 ZNF747Q9BV97 191 aa9.64□□□□□ -0.87
VPS33B-201ENST00000333371 PET117Q6UWS5 81 aa9.64□□□□□ -0.87
VPS33B-201ENST00000333371 FA2HQ7L5A8 372 aa9.64□□□□□ -0.87
VPS33B-201ENST00000333371 PIP4P2Q8N4L2 257 aa9.63□□□□□ -0.87
VPS33B-201ENST00000333371 TIMD4Q96H15 378 aa9.63□□□□□ -0.87
VPS33B-201ENST00000333371 DPM3Q9P2X0 92 aa9.63□□□□□ -0.87
VPS33B-201ENST00000333371 HSPB8Q9UJY1 196 aa9.63□□□□□ -0.87
VPS33B-201ENST00000333371 SELENOKQ9Y6D0 94 aa9.63□□□□□ -0.87
VPS33B-201ENST00000333371 WI2-2373I1.2A0A1W2PRP0 233 aa9.63□□□□□ -0.87
VPS33B-201ENST00000333371 NCBP2LA6PVI3 153 aaKnown RBP9.63□□□□□ -0.87
VPS33B-201ENST00000333371 K7EQM0 130 aa9.63□□□□□ -0.87
VPS33B-201ENST00000333371 SH2D1AO60880 128 aa9.63□□□□□ -0.87
VPS33B-201ENST00000333371 LINC01545Q5VT33 79 aa9.63□□□□□ -0.87
VPS33B-201ENST00000333371 WFDC3Q8IUB2 231 aa9.63□□□□□ -0.87
VPS33B-201ENST00000333371 HIVEP3Q5T1R4 2406 aa9.63□□□□□ -0.87
VPS33B-201ENST00000333371 ZNF80P51504 273 aaPredicted RBP9.63□□□□□ -0.87
VPS33B-201ENST00000333371 SIGLEC8Q9NYZ4 499 aa9.63□□□□□ -0.87
VPS33B-201ENST00000333371 IGHV2-70DA0A0C4DH43 119 aa9.62□□□□□ -0.87
VPS33B-201ENST00000333371 CT45A10P0DMU9 189 aa9.62□□□□□ -0.87
VPS33B-201ENST00000333371 COTL1Q14019 142 aa9.62□□□□□ -0.87
VPS33B-201ENST00000333371 VGLL1Q99990 258 aa9.62□□□□□ -0.87
VPS33B-201ENST00000333371 TRBV6-1A0A0K0K1D8 114 aa9.62□□□□□ -0.87
VPS33B-201ENST00000333371 TMEM189A5PLL7 270 aa9.62□□□□□ -0.87
VPS33B-201ENST00000333371 NPIPB5A8MRT5 1133 aa9.62□□□□□ -0.87
VPS33B-201ENST00000333371 C5orf64Q2M2E5 130 aa9.62□□□□□ -0.87
VPS33B-201ENST00000333371 OR4C5Q8NGB2 326 aa9.62□□□□□ -0.87
VPS33B-201ENST00000333371 RNF24Q9Y225 148 aa9.62□□□□□ -0.87
VPS33B-201ENST00000333371 SPTAN1Q13813 2472 aaKnown RBP9.61□□□□□ -0.87
VPS33B-201ENST00000333371 IGLV11-55A0A075B6I3 123 aa9.61□□□□□ -0.87
VPS33B-201ENST00000333371 EGR2P11161 476 aaPredicted RBP9.61□□□□□ -0.87
VPS33B-201ENST00000333371 LY6G5BQ8NDX9 201 aa9.61□□□□□ -0.87
VPS33B-201ENST00000333371 AAMDCQ9H7C9 122 aa9.61□□□□□ -0.87
VPS33B-201ENST00000333371 MSRB1Q9NZV6 116 aa9.61□□□□□ -0.87
VPS33B-201ENST00000333371 GAS8-AS1O95177 125 aa9.61□□□□□ -0.87
VPS33B-201ENST00000333371 C2orf91Q6ZV80 131 aa9.61□□□□□ -0.87
VPS33B-201ENST00000333371 OR10AG1Q8NH19 301 aa9.61□□□□□ -0.87
VPS33B-201ENST00000333371 PRELID3AQ96N28 172 aa9.61□□□□□ -0.87
VPS33B-201ENST00000333371 MFAP4P55083 255 aa9.6□□□□□ -0.87
VPS33B-201ENST00000333371 RBX1P62877 108 aa9.6□□□□□ -0.87
VPS33B-201ENST00000333371 MRPL51Q4U2R6 128 aaKnown RBP9.6□□□□□ -0.87
VPS33B-201ENST00000333371 LYPD1Q8N2G4 141 aa9.6□□□□□ -0.87
VPS33B-201ENST00000333371 RNF5Q99942 180 aa9.6□□□□□ -0.87
VPS33B-201ENST00000333371 NDUFA3O95167 84 aa9.6□□□□□ -0.87
VPS33B-201ENST00000333371 RHOGP84095 191 aa9.6□□□□□ -0.87
VPS33B-201ENST00000333371 AMMECR1LQ6DCA0 310 aa9.6□□□□□ -0.87
VPS33B-201ENST00000333371 ARPC1AQ92747 370 aa9.6□□□□□ -0.87
VPS33B-201ENST00000333371 C21orf62Q9NYP8 219 aa9.6□□□□□ -0.87
VPS33B-201ENST00000333371 SMAD5-AS1Q9Y6J3 95 aa9.6□□□□□ -0.87
VPS33B-201ENST00000333371 CSN1S1P47710 185 aa9.59□□□□□ -0.87
VPS33B-201ENST00000333371 UQCRFS1P47985 274 aa9.59□□□□□ -0.87
VPS33B-201ENST00000333371 FAM104BQ5XKR9 115 aa9.59□□□□□ -0.87
VPS33B-201ENST00000333371 DEFB125Q8N687 156 aa9.59□□□□□ -0.87
VPS33B-201ENST00000333371 NPBQ8NG41 125 aa9.59□□□□□ -0.87
VPS33B-201ENST00000333371 OR11H6Q8NGC7 330 aa9.59□□□□□ -0.87
VPS33B-201ENST00000333371 PRORYQ9H606 182 aa9.59□□□□□ -0.87
VPS33B-201ENST00000333371 IGHV3OR16-13A0A075B7E8 117 aa9.59□□□□□ -0.87
VPS33B-201ENST00000333371 IGHV3-74A0A0B4J1X5 117 aa9.59□□□□□ -0.87
VPS33B-201ENST00000333371 IGHV3-66A0A0C4DH42 116 aa9.59□□□□□ -0.87
VPS33B-201ENST00000333371 NPYP01303 97 aa9.59□□□□□ -0.87
VPS33B-201ENST00000333371 IGHG4P01861 327 aa9.59□□□□□ -0.87
VPS33B-201ENST00000333371 PPIFP30405 207 aaKnown RBP9.59□□□□□ -0.87
VPS33B-201ENST00000333371 CACNG7P62955 275 aa9.59□□□□□ -0.87
VPS33B-201ENST00000333371 ZNF575Q86XF7 245 aa9.59□□□□□ -0.87
VPS33B-201ENST00000333371 GATD1Q8NB37 220 aa9.59□□□□□ -0.87
VPS33B-201ENST00000333371 PRR25Q96S07 402 aa9.59□□□□□ -0.87
VPS33B-201ENST00000333371 SRSF8Q9BRL6 282 aaKnown RBP9.59□□□□□ -0.87
VPS33B-201ENST00000333371 GPR183P32249 361 aa9.58□□□□□ -0.88
VPS33B-201ENST00000333371 ERCC8Q13216 396 aa9.58□□□□□ -0.88
VPS33B-201ENST00000333371 TWIST1Q15672 202 aa9.58□□□□□ -0.88
VPS33B-201ENST00000333371 ZNF493Q6ZR52 646 aa9.58□□□□□ -0.88
VPS33B-201ENST00000333371 TRAV8-6A0A0B4J262 113 aa9.58□□□□□ -0.88
VPS33B-201ENST00000333371 COX8AP10176 69 aa9.58□□□□□ -0.88
VPS33B-201ENST00000333371 RNF151Q2KHN1 245 aa9.58□□□□□ -0.88
VPS33B-201ENST00000333371 PRAC2D3DTV9 90 aa9.58□□□□□ -0.88
VPS33B-201ENST00000333371 CTSGP08311 255 aa9.58□□□□□ -0.88
VPS33B-201ENST00000333371 HIST1H1AQ02539 215 aaPredicted RBP9.58□□□□□ -0.88
VPS33B-201ENST00000333371 C11orf71Q6IPW1 123 aa9.58□□□□□ -0.88
VPS33B-201ENST00000333371 ORMDL3Q8N138 153 aa9.58□□□□□ -0.88
VPS33B-201ENST00000333371 RNF182Q8N6D2 247 aa9.58□□□□□ -0.88
VPS33B-201ENST00000333371 NAA38Q9BRA0 125 aaKnown RBP9.58□□□□□ -0.88
VPS33B-201ENST00000333371 MS4A6AQ9H2W1 248 aa9.58□□□□□ -0.88
VPS33B-201ENST00000333371 ODF3BA8MYP8 253 aa9.57□□□□□ -0.88
VPS33B-201ENST00000333371 NDUFS7O75251 213 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms