RNA–Protein interactions for RNA: ENST00000332853.8

VSTM4-202, Transcript of V-set and transmembrane domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VSTM4, Length 6,392 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-202ENST00000332853 PRB1P04280 392 aa10.37□□□□□ -0.75
VSTM4-202ENST00000332853 HOXB4P17483 251 aaPredicted RBP10.37□□□□□ -0.75
VSTM4-202ENST00000332853 LAGE3Q14657 143 aa10.37□□□□□ -0.75
VSTM4-202ENST00000332853 KAAG1Q9UBP8 84 aa10.37□□□□□ -0.75
VSTM4-202ENST00000332853 NCOA6Q14686 2063 aaPredicted RBP10.36□□□□□ -0.75
VSTM4-202ENST00000332853 TRBV19A0A075B6N1 114 aa10.36□□□□□ -0.75
VSTM4-202ENST00000332853 IGKCP01834 107 aa10.36□□□□□ -0.75
VSTM4-202ENST00000332853 C3orf79P0CE67 100 aa10.36□□□□□ -0.75
VSTM4-202ENST00000332853 IFI27P40305 119 aaPredicted RBP10.36□□□□□ -0.75
VSTM4-202ENST00000332853 UBE2E2Q96LR5 201 aa10.36□□□□□ -0.75
VSTM4-202ENST00000332853 RCHY1Q96PM5 261 aa10.36□□□□□ -0.75
VSTM4-202ENST00000332853 PLA2G2EQ9NZK7 142 aa10.36□□□□□ -0.75
VSTM4-202ENST00000332853 CYSLTR1Q9Y271 337 aa10.36□□□□□ -0.75
VSTM4-202ENST00000332853 MSMPQ1L6U9 139 aa10.36□□□□□ -0.75
VSTM4-202ENST00000332853 A0A087WWL8 130 aa10.36□□□□□ -0.75
VSTM4-202ENST00000332853 K7ERU9 68 aa10.36□□□□□ -0.75
VSTM4-202ENST00000332853 RIPPLY3P57055 190 aa10.36□□□□□ -0.75
VSTM4-202ENST00000332853 LINC00477Q96M19 166 aa10.36□□□□□ -0.75
VSTM4-202ENST00000332853 FNDC4Q9H6D8 234 aaPredicted RBP10.36□□□□□ -0.75
VSTM4-202ENST00000332853 DAZ1Q9NQZ3 744 aaKnown RBP10.36□□□□□ -0.75
VSTM4-202ENST00000332853 IGHV3-53P01767 116 aa10.36□□□□□ -0.75
VSTM4-202ENST00000332853 GTSCR1Q86UQ5 136 aa10.36□□□□□ -0.75
VSTM4-202ENST00000332853 TMEM8BA6NDV4 472 aa10.35□□□□□ -0.75
VSTM4-202ENST00000332853 YPEL3P61236 119 aaPredicted RBP10.35□□□□□ -0.75
VSTM4-202ENST00000332853 OR13C6PQ8NH95 151 aa10.35□□□□□ -0.75
VSTM4-202ENST00000332853 C17orf77Q96MU5 243 aa10.35□□□□□ -0.75
VSTM4-202ENST00000332853 ABCA4P78363 2273 aa10.35□□□□□ -0.75
VSTM4-202ENST00000332853 ORMDL2Q53FV1 153 aa10.35□□□□□ -0.75
VSTM4-202ENST00000332853 TMEM75Q8N9X5 138 aa10.35□□□□□ -0.75
VSTM4-202ENST00000332853 SHANK1Q9Y566 2161 aa10.35□□□□□ -0.75
VSTM4-202ENST00000332853 C5orf30Q96GV9 206 aa10.35□□□□□ -0.75
VSTM4-202ENST00000332853 TRGV4A0A0C4DH28 118 aa10.34□□□□□ -0.75
VSTM4-202ENST00000332853 CD28P10747 220 aa10.34□□□□□ -0.75
VSTM4-202ENST00000332853 CD300EQ496F6 205 aaPredicted RBP10.34□□□□□ -0.75
VSTM4-202ENST00000332853 LSM4Q9Y4Z0 139 aaKnown RBP10.34□□□□□ -0.75
VSTM4-202ENST00000332853 FXYD5Q96DB9 178 aa10.34□□□□□ -0.75
VSTM4-202ENST00000332853 MALRD1Q5VYJ5 2156 aa10.34□□□□□ -0.75
VSTM4-202ENST00000332853 ADORA2A-AS1P86434 159 aa10.34□□□□□ -0.75
VSTM4-202ENST00000332853 H3BRN7 92 aa10.34□□□□□ -0.75
VSTM4-202ENST00000332853 H3BUT2 72 aa10.34□□□□□ -0.75
VSTM4-202ENST00000332853 IGLV2-14P01704 120 aa10.34□□□□□ -0.75
VSTM4-202ENST00000332853 IGHV2-5P01817 119 aa10.34□□□□□ -0.75
VSTM4-202ENST00000332853 IGLC1P0CG04 106 aa10.34□□□□□ -0.75
VSTM4-202ENST00000332853 V9GYV3 84 aa10.34□□□□□ -0.75
VSTM4-202ENST00000332853 TYMSP04818 313 aa10.33□□□□□ -0.76
VSTM4-202ENST00000332853 PDE6HQ13956 83 aa10.33□□□□□ -0.76
VSTM4-202ENST00000332853 ALKBH7Q9BT30 221 aaPredicted RBP10.33□□□□□ -0.76
VSTM4-202ENST00000332853 NHP2Q9NX24 153 aaKnown RBP10.33□□□□□ -0.76
VSTM4-202ENST00000332853 TTC28Q96AY4 2481 aa10.33□□□□□ -0.76
VSTM4-202ENST00000332853 C1orf122Q6ZSJ8 110 aa10.33□□□□□ -0.76
VSTM4-202ENST00000332853 IGLC7A0M8Q6 106 aa10.33□□□□□ -0.76
VSTM4-202ENST00000332853 TDGF1P3P51864 188 aa10.32□□□□□ -0.76
VSTM4-202ENST00000332853 Q71RC1 249 aaPredicted RBP10.32□□□□□ -0.76
VSTM4-202ENST00000332853 THAP8Q8NA92 274 aa10.32□□□□□ -0.76
VSTM4-202ENST00000332853 PRR20EP86478 221 aa10.32□□□□□ -0.76
VSTM4-202ENST00000332853 PRR20CP86479 221 aa10.32□□□□□ -0.76
VSTM4-202ENST00000332853 PRR20DP86480 221 aa10.32□□□□□ -0.76
VSTM4-202ENST00000332853 PRR20BP86481 221 aa10.32□□□□□ -0.76
VSTM4-202ENST00000332853 PRR20AP86496 221 aa10.32□□□□□ -0.76
VSTM4-202ENST00000332853 C8orf86Q6ZUL3 223 aa10.32□□□□□ -0.76
VSTM4-202ENST00000332853 TMEM158Q8WZ71 300 aa10.32□□□□□ -0.76
VSTM4-202ENST00000332853 MED13LQ71F56 2210 aa10.32□□□□□ -0.76
VSTM4-202ENST00000332853 POU2AF1Q16633 256 aa10.32□□□□□ -0.76
VSTM4-202ENST00000332853 ZNF876PQ49A33 203 aa10.32□□□□□ -0.76
VSTM4-202ENST00000332853 TRGV1A0A0A0MS02 117 aa10.32□□□□□ -0.76
VSTM4-202ENST00000332853 H3BRM9 83 aa10.32□□□□□ -0.76
VSTM4-202ENST00000332853 K7EN84 100 aa10.32□□□□□ -0.76
VSTM4-202ENST00000332853 HLA-DMBP28068 263 aa10.32□□□□□ -0.76
VSTM4-202ENST00000332853 DEFB131AP59861 70 aa10.32□□□□□ -0.76
VSTM4-202ENST00000332853 CSTL1Q9H114 145 aa10.32□□□□□ -0.76
VSTM4-202ENST00000332853 DPH3P1Q9H4G8 78 aa10.32□□□□□ -0.76
VSTM4-202ENST00000332853 A0A0U1RRA0 63 aa10.31□□□□□ -0.76
VSTM4-202ENST00000332853 ZNF664Q8N3J9 261 aa10.31□□□□□ -0.76
VSTM4-202ENST00000332853 DNAH12Q6ZR08 3092 aa10.31□□□□□ -0.76
VSTM4-202ENST00000332853 NRGNQ92686 78 aa10.31□□□□□ -0.76
VSTM4-202ENST00000332853 SLAQ13239 276 aa10.31□□□□□ -0.76
VSTM4-202ENST00000332853 KLK9Q9UKQ9 250 aa10.31□□□□□ -0.76
VSTM4-202ENST00000332853 ZNF815PA8K554 130 aa10.31□□□□□ -0.76
VSTM4-202ENST00000332853 SPINK13Q1W4C9 94 aa10.31□□□□□ -0.76
VSTM4-202ENST00000332853 C1orf194Q5T5A4 169 aa10.31□□□□□ -0.76
VSTM4-202ENST00000332853 SPCS1Q9Y6A9 102 aa10.31□□□□□ -0.76
VSTM4-202ENST00000332853 SYS1-DBNDD2H3BUS1 97 aa10.3□□□□□ -0.76
VSTM4-202ENST00000332853 ZC2HC1AQ96GY0 325 aa10.3□□□□□ -0.76
VSTM4-202ENST00000332853 VGLL1Q99990 258 aa10.3□□□□□ -0.76
VSTM4-202ENST00000332853 GFRA4Q9GZZ7 299 aa10.3□□□□□ -0.76
VSTM4-202ENST00000332853 Q8NA96 180 aa10.3□□□□□ -0.76
VSTM4-202ENST00000332853 CR1LQ2VPA4 569 aa10.3□□□□□ -0.76
VSTM4-202ENST00000332853 NAA38Q9BRA0 125 aaKnown RBP10.3□□□□□ -0.76
VSTM4-202ENST00000332853 TRAV2A0A0B4J234 112 aa10.3□□□□□ -0.76
VSTM4-202ENST00000332853 GATA3P23771 443 aa10.3□□□□□ -0.76
VSTM4-202ENST00000332853 LYPD6BQ8NI32 183 aa10.3□□□□□ -0.76
VSTM4-202ENST00000332853 ZNF492Q9P255 531 aa10.3□□□□□ -0.76
VSTM4-202ENST00000332853 TRAV12-2A0A075B6T6 113 aa10.3□□□□□ -0.76
VSTM4-202ENST00000332853 GUSBP1Q15486 140 aa10.3□□□□□ -0.76
VSTM4-202ENST00000332853 C18orf32Q8TCD1 76 aa10.3□□□□□ -0.76
VSTM4-202ENST00000332853 MRPL27Q9P0M9 148 aaKnown RBP10.3□□□□□ -0.76
VSTM4-202ENST00000332853 COTL1Q14019 142 aa10.29□□□□□ -0.76
VSTM4-202ENST00000332853 VWC2Q2TAL6 325 aa10.29□□□□□ -0.76
VSTM4-202ENST00000332853 MUC6Q6W4X9 2439 aa10.29□□□□□ -0.76
VSTM4-202ENST00000332853 A0A087X0K7 114 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms