RNA–Protein interactions for RNA: ENST00000332345.10

LIMS1-201, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS1, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-201ENST00000332345 PSMG3Q9BT73 122 aaPredicted RBP10.15□□□□□ -0.78
LIMS1-201ENST00000332345 IGHV3OR16-12A0A075B7B8 117 aa10.14□□□□□ -0.79
LIMS1-201ENST00000332345 RNF222A6NCQ9 220 aa10.14□□□□□ -0.79
LIMS1-201ENST00000332345 CXorf65A6NEN9 183 aa10.14□□□□□ -0.79
LIMS1-201ENST00000332345 TAAR5O14804 337 aa10.14□□□□□ -0.79
LIMS1-201ENST00000332345 DEFB4AO15263 64 aa10.14□□□□□ -0.79
LIMS1-201ENST00000332345 NDUFB4O95168 129 aa10.14□□□□□ -0.79
LIMS1-201ENST00000332345 SPINK13Q1W4C9 94 aa10.14□□□□□ -0.79
LIMS1-201ENST00000332345 OR10G4Q8NGN3 311 aa10.14□□□□□ -0.79
LIMS1-201ENST00000332345 OR10G9Q8NGN4 311 aa10.14□□□□□ -0.79
LIMS1-201ENST00000332345 OR10G7Q8NGN6 311 aa10.14□□□□□ -0.79
LIMS1-201ENST00000332345 OR2G3Q8NGZ4 309 aa10.14□□□□□ -0.79
LIMS1-201ENST00000332345 GNPNAT1Q96EK6 184 aaPredicted RBP10.14□□□□□ -0.79
LIMS1-201ENST00000332345 RFNGQ9Y644 331 aa10.14□□□□□ -0.79
LIMS1-201ENST00000332345 PRAC2D3DTV9 90 aa10.13□□□□□ -0.79
LIMS1-201ENST00000332345 G3V3Q6 166 aa10.13□□□□□ -0.79
LIMS1-201ENST00000332345 BOLA2-SMG1P6H3BVE0 249 aa10.13□□□□□ -0.79
LIMS1-201ENST00000332345 M0R2Z0 102 aa10.13□□□□□ -0.79
LIMS1-201ENST00000332345 ARPC5O15511 151 aa10.13□□□□□ -0.79
LIMS1-201ENST00000332345 JTBO76095 146 aa10.13□□□□□ -0.79
LIMS1-201ENST00000332345 OR10J4P0C629 311 aa10.13□□□□□ -0.79
LIMS1-201ENST00000332345 RBMY1A1P0DJD3 496 aaKnown RBP10.13□□□□□ -0.79
LIMS1-201ENST00000332345 RBMY1CP0DJD4 496 aa10.13□□□□□ -0.79
LIMS1-201ENST00000332345 ATP6V0CP27449 155 aa10.13□□□□□ -0.79
LIMS1-201ENST00000332345 TSPOP30536 169 aa10.13□□□□□ -0.79
LIMS1-201ENST00000332345 RBMY1FQ15415 496 aaKnown RBP10.13□□□□□ -0.79
LIMS1-201ENST00000332345 RPL7L1Q6DKI1 246 aaKnown RBP10.13□□□□□ -0.79
LIMS1-201ENST00000332345 LYPD1Q8N2G4 141 aa10.13□□□□□ -0.79
LIMS1-201ENST00000332345 FXYD5Q96DB9 178 aa10.13□□□□□ -0.79
LIMS1-201ENST00000332345 TMEM208Q9BTX3 173 aa10.13□□□□□ -0.79
LIMS1-201ENST00000332345 TMEM189A5PLL7 270 aa10.12□□□□□ -0.79
LIMS1-201ENST00000332345 INSP01308 110 aa10.12□□□□□ -0.79
LIMS1-201ENST00000332345 HBE1P02100 147 aa10.12□□□□□ -0.79
LIMS1-201ENST00000332345 CDKN1BP46527 198 aa10.12□□□□□ -0.79
LIMS1-201ENST00000332345 RAB2AP61019 212 aa10.12□□□□□ -0.79
LIMS1-201ENST00000332345 PMS2P11Q13670 270 aa10.12□□□□□ -0.79
LIMS1-201ENST00000332345 ICAM4Q14773 271 aa10.12□□□□□ -0.79
LIMS1-201ENST00000332345 FAM122CQ6P4D5 195 aa10.12□□□□□ -0.79
LIMS1-201ENST00000332345 PQLC2Q6ZP29 291 aa10.12□□□□□ -0.79
LIMS1-201ENST00000332345 C1orf158Q8N1D5 194 aa10.12□□□□□ -0.79
LIMS1-201ENST00000332345 EXOC3-AS1Q8N2X6 119 aa10.12□□□□□ -0.79
LIMS1-201ENST00000332345 LINC00477Q96M19 166 aa10.12□□□□□ -0.79
LIMS1-201ENST00000332345 NUPR2A6NF83 97 aa10.11□□□□□ -0.79
LIMS1-201ENST00000332345 SMLR1H3BR10 107 aa10.11□□□□□ -0.79
LIMS1-201ENST00000332345 M0R3E3 92 aa10.11□□□□□ -0.79
LIMS1-201ENST00000332345 CRXO43186 299 aaPredicted RBP10.11□□□□□ -0.79
LIMS1-201ENST00000332345 PRB4P10163 310 aaPredicted RBP10.11□□□□□ -0.79
LIMS1-201ENST00000332345 NANOS2P60321 138 aaKnown RBP10.11□□□□□ -0.79
LIMS1-201ENST00000332345 RANP62826 216 aaKnown RBP10.11□□□□□ -0.79
LIMS1-201ENST00000332345 UBE2L3P68036 154 aaKnown RBP10.11□□□□□ -0.79
LIMS1-201ENST00000332345 ZNF503Q96F45 646 aa10.11□□□□□ -0.79
LIMS1-201ENST00000332345 TRAV12-2A0A075B6T6 113 aa10.1□□□□□ -0.79
LIMS1-201ENST00000332345 HMSDA8MTL9 139 aa10.1□□□□□ -0.79
LIMS1-201ENST00000332345 NPIPB6E9PJ23 425 aa10.1□□□□□ -0.79
LIMS1-201ENST00000332345 CSN1S1P47710 185 aa10.1□□□□□ -0.79
LIMS1-201ENST00000332345 CDC34P49427 236 aaPredicted RBP10.1□□□□□ -0.79
LIMS1-201ENST00000332345 RRN3P1Q2M238 152 aa10.1□□□□□ -0.79
LIMS1-201ENST00000332345 CEMP1Q6PRD7 247 aaPredicted RBP10.1□□□□□ -0.79
LIMS1-201ENST00000332345 TMEM256Q8N2U0 113 aa10.1□□□□□ -0.79
LIMS1-201ENST00000332345 RPP25LQ8N5L8 163 aaKnown RBP10.1□□□□□ -0.79
LIMS1-201ENST00000332345 PHLDA1Q8WV24 401 aaPredicted RBP10.1□□□□□ -0.79
LIMS1-201ENST00000332345 ODF3Q96PU9 254 aa10.1□□□□□ -0.79
LIMS1-201ENST00000332345 KLK5Q9Y337 293 aaPredicted RBP10.1□□□□□ -0.79
LIMS1-201ENST00000332345 STARD9Q9P2P6 4700 aa10.09□□□□□ -0.79
LIMS1-201ENST00000332345 A0A0D9SG52 128 aa10.09□□□□□ -0.79
LIMS1-201ENST00000332345 CT45A10P0DMU9 189 aa10.09□□□□□ -0.79
LIMS1-201ENST00000332345 LEPP41159 167 aa10.09□□□□□ -0.79
LIMS1-201ENST00000332345 FAM74A1Q5RGS3 127 aa10.09□□□□□ -0.79
LIMS1-201ENST00000332345 BAP18Q8IXM2 172 aa10.09□□□□□ -0.79
LIMS1-201ENST00000332345 RXFP4Q8TDU9 374 aa10.09□□□□□ -0.79
LIMS1-201ENST00000332345 RAB24Q969Q5 203 aa10.09□□□□□ -0.79
LIMS1-201ENST00000332345 PHYHIPLQ96FC7 376 aa10.09□□□□□ -0.79
LIMS1-201ENST00000332345 LINC01587Q99440 93 aa10.09□□□□□ -0.79
LIMS1-201ENST00000332345 ACTR3CQ9C0K3 210 aaPredicted RBP10.09□□□□□ -0.79
LIMS1-201ENST00000332345 SH3BGRL3Q9H299 93 aa10.09□□□□□ -0.79
LIMS1-201ENST00000332345 Q9H3A6 140 aa10.09□□□□□ -0.79
LIMS1-201ENST00000332345 TENM2Q9NT68 2774 aa10.09□□□□□ -0.79
LIMS1-201ENST00000332345 SPART-AS1P0CW21 52 aa10.08□□□□□ -0.8
LIMS1-201ENST00000332345 EMP1P54849 157 aa10.08□□□□□ -0.8
LIMS1-201ENST00000332345 ERCC8Q13216 396 aa10.08□□□□□ -0.8
LIMS1-201ENST00000332345 ZNF345Q14585 488 aa10.08□□□□□ -0.8
LIMS1-201ENST00000332345 TMEM78Q5T7P6 136 aa10.08□□□□□ -0.8
LIMS1-201ENST00000332345 C9orf47Q6ZRZ4 202 aa10.08□□□□□ -0.8
LIMS1-201ENST00000332345 KCNRGQ8N5I3 272 aa10.08□□□□□ -0.8
LIMS1-201ENST00000332345 C20orf144Q9BQM9 153 aa10.08□□□□□ -0.8
LIMS1-201ENST00000332345 TEX48A0A1B0GUV7 120 aa10.07□□□□□ -0.8
LIMS1-201ENST00000332345 LOC102723971A0A1B0GUV8 181 aa10.07□□□□□ -0.8
LIMS1-201ENST00000332345 PGPA6NDG6 321 aa10.07□□□□□ -0.8
LIMS1-201ENST00000332345 C11orf94C9JXX5 98 aa10.07□□□□□ -0.8
LIMS1-201ENST00000332345 HMGB3O15347 200 aaKnown RBP10.07□□□□□ -0.8
LIMS1-201ENST00000332345 EIF3GO75821 320 aaKnown RBP eCLIP10.07□□□□□ -0.8
LIMS1-201ENST00000332345 STAG3L2P0CL84 134 aa10.07□□□□□ -0.8
LIMS1-201ENST00000332345 STAG3L3P0CL85 134 aa10.07□□□□□ -0.8
LIMS1-201ENST00000332345 TAS2R60P59551 318 aa10.07□□□□□ -0.8
LIMS1-201ENST00000332345 AKR1C8PQ5T2L2 129 aa10.07□□□□□ -0.8
LIMS1-201ENST00000332345 Q6ZNX1 250 aa10.07□□□□□ -0.8
LIMS1-201ENST00000332345 OR11H4Q8NGC9 324 aa10.07□□□□□ -0.8
LIMS1-201ENST00000332345 ARPC5LQ9BPX5 153 aa10.07□□□□□ -0.8
LIMS1-201ENST00000332345 AGPAT4-IT1Q9H0P7 198 aa10.07□□□□□ -0.8
LIMS1-201ENST00000332345 OTORQ9NRC9 128 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms