RNA–Protein interactions for RNA: ENST00000331456.6

TRAIP-201, Transcript of TRAF interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAIP, Length 2,028 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-201ENST00000331456 ZC2HC1AQ96GY0 325 aa10.75□□□□□ -0.69
TRAIP-201ENST00000331456 FBN2P35556 2912 aa10.75□□□□□ -0.69
TRAIP-201ENST00000331456 IGHV3OR16-13A0A075B7E8 117 aa10.75□□□□□ -0.69
TRAIP-201ENST00000331456 IGHV3-74A0A0B4J1X5 117 aa10.75□□□□□ -0.69
TRAIP-201ENST00000331456 TRBV12-3P01733 135 aa10.75□□□□□ -0.69
TRAIP-201ENST00000331456 IGHG4P01861 327 aa10.75□□□□□ -0.69
TRAIP-201ENST00000331456 APOHP02749 345 aaPredicted RBP10.75□□□□□ -0.69
TRAIP-201ENST00000331456 FRMD6-AS1P0C7T7 363 aa10.75□□□□□ -0.69
TRAIP-201ENST00000331456 OR2D3Q8NGH3 330 aa10.75□□□□□ -0.69
TRAIP-201ENST00000331456 OR10D4PQ8NGN7 298 aa10.75□□□□□ -0.69
TRAIP-201ENST00000331456 CRYBG3Q68DQ2 2970 aa10.75□□□□□ -0.69
TRAIP-201ENST00000331456 IGKV2-40A0A087WW87 121 aaPredicted RBP10.74□□□□□ -0.69
TRAIP-201ENST00000331456 IGHV3-49A0A0A0MS15 119 aa10.74□□□□□ -0.69
TRAIP-201ENST00000331456 IGKV2D-40P01614 121 aaPredicted RBP10.74□□□□□ -0.69
TRAIP-201ENST00000331456 CRISP2P16562 243 aa10.74□□□□□ -0.69
TRAIP-201ENST00000331456 LCN12Q6JVE5 192 aa10.74□□□□□ -0.69
TRAIP-201ENST00000331456 C16orf54Q6UWD8 224 aa10.74□□□□□ -0.69
TRAIP-201ENST00000331456 NPFFR1Q9GZQ6 430 aa10.74□□□□□ -0.69
TRAIP-201ENST00000331456 SETXQ7Z333 2677 aaKnown RBP10.74□□□□□ -0.69
TRAIP-201ENST00000331456 A0A1W2PS18 150 aa10.74□□□□□ -0.69
TRAIP-201ENST00000331456 TMEM95Q3KNT9 176 aa10.74□□□□□ -0.69
TRAIP-201ENST00000331456 IGFL4Q6B9Z1 124 aa10.74□□□□□ -0.69
TRAIP-201ENST00000331456 TCF24Q7RTU0 167 aa10.74□□□□□ -0.69
TRAIP-201ENST00000331456 HIST1H2BLQ99880 126 aa10.74□□□□□ -0.69
TRAIP-201ENST00000331456 PRDM13Q9H4Q3 707 aa10.74□□□□□ -0.69
TRAIP-201ENST00000331456 CLEC5AQ9NY25 188 aa10.74□□□□□ -0.69
TRAIP-201ENST00000331456 APCSP02743 223 aa10.73□□□□□ -0.69
TRAIP-201ENST00000331456 RBPMS2Q6ZRY4 209 aaKnown RBP10.73□□□□□ -0.69
TRAIP-201ENST00000331456 MRPL53Q96EL3 112 aaKnown RBP10.73□□□□□ -0.69
TRAIP-201ENST00000331456 NDFIP1Q9BT67 221 aa10.73□□□□□ -0.69
TRAIP-201ENST00000331456 PEF1Q9UBV8 284 aaKnown RBP10.73□□□□□ -0.69
TRAIP-201ENST00000331456 RBAKDNA6NC62 111 aa10.72□□□□□ -0.69
TRAIP-201ENST00000331456 HOXA3O43365 443 aaPredicted RBP10.72□□□□□ -0.69
TRAIP-201ENST00000331456 PRB4P10163 310 aaPredicted RBP10.72□□□□□ -0.69
TRAIP-201ENST00000331456 PSMB8P28062 276 aa10.72□□□□□ -0.69
TRAIP-201ENST00000331456 HLA-DMBP28068 263 aa10.72□□□□□ -0.69
TRAIP-201ENST00000331456 UNQ9165/PRO28630Q6UXU0 137 aa10.72□□□□□ -0.69
TRAIP-201ENST00000331456 LCNL1Q6ZST4 164 aa10.72□□□□□ -0.69
TRAIP-201ENST00000331456 GLMPQ8WWB7 406 aa10.72□□□□□ -0.69
TRAIP-201ENST00000331456 TMEM18Q96B42 140 aa10.72□□□□□ -0.69
TRAIP-201ENST00000331456 PACRGQ96M98 296 aaPredicted RBP10.72□□□□□ -0.69
TRAIP-201ENST00000331456 C8orf49Q96NF6 230 aa10.72□□□□□ -0.69
TRAIP-201ENST00000331456 PRRC2AP48634 2157 aaKnown RBP10.72□□□□□ -0.69
TRAIP-201ENST00000331456 VPS13CQ709C8 3753 aa10.72□□□□□ -0.69
TRAIP-201ENST00000331456 ZNF705FA8MVS1 300 aaPredicted RBP10.72□□□□□ -0.69
TRAIP-201ENST00000331456 HIST2H2BCQ6DN03 193 aa10.72□□□□□ -0.69
TRAIP-201ENST00000331456 C8orf86Q6ZUL3 223 aa10.72□□□□□ -0.69
TRAIP-201ENST00000331456 COX8CQ7Z4L0 72 aa10.72□□□□□ -0.69
TRAIP-201ENST00000331456 GTSF1Q8WW33 167 aa10.72□□□□□ -0.69
TRAIP-201ENST00000331456 PGLYRP4Q96LB8 373 aa10.72□□□□□ -0.69
TRAIP-201ENST00000331456 PRR25Q96S07 402 aa10.72□□□□□ -0.69
TRAIP-201ENST00000331456 ASCL2Q99929 193 aa10.72□□□□□ -0.69
TRAIP-201ENST00000331456 GRIFINA4D1Z8 144 aa10.71□□□□□ -0.69
TRAIP-201ENST00000331456 HBBP68871 147 aa10.71□□□□□ -0.69
TRAIP-201ENST00000331456 FAM106AQ4KMX7 169 aa10.71□□□□□ -0.69
TRAIP-201ENST00000331456 FAM162BQ5T6X4 162 aa10.71□□□□□ -0.69
TRAIP-201ENST00000331456 WFDC11Q8NEX6 87 aa10.71□□□□□ -0.69
TRAIP-201ENST00000331456 VGLL1Q99990 258 aa10.71□□□□□ -0.69
TRAIP-201ENST00000331456 USP9YO00507 2555 aaPredicted RBP10.71□□□□□ -0.7
TRAIP-201ENST00000331456 AMBPP02760 352 aa10.7□□□□□ -0.7
TRAIP-201ENST00000331456 Q0VG73 95 aa10.7□□□□□ -0.7
TRAIP-201ENST00000331456 Q71RC1 249 aaPredicted RBP10.7□□□□□ -0.7
TRAIP-201ENST00000331456 BAGE3Q86Y29 109 aa10.7□□□□□ -0.7
TRAIP-201ENST00000331456 RNF182Q8N6D2 247 aa10.7□□□□□ -0.7
TRAIP-201ENST00000331456 C16orf92Q96LL3 132 aa10.7□□□□□ -0.7
TRAIP-201ENST00000331456 A0A1B0GXF2 115 aa10.7□□□□□ -0.7
TRAIP-201ENST00000331456 BMI1P35226 326 aa10.7□□□□□ -0.7
TRAIP-201ENST00000331456 CAMPP49913 170 aa10.7□□□□□ -0.7
TRAIP-201ENST00000331456 CRIP1P50238 77 aa10.7□□□□□ -0.7
TRAIP-201ENST00000331456 FOXA3P55318 350 aaPredicted RBP10.7□□□□□ -0.7
TRAIP-201ENST00000331456 Q6AWC8 147 aa10.7□□□□□ -0.7
TRAIP-201ENST00000331456 ZNF702PQ9H963 129 aa10.7□□□□□ -0.7
TRAIP-201ENST00000331456 PTPN13Q12923 2485 aa10.7□□□□□ -0.7
TRAIP-201ENST00000331456 TRAV8-2A0A0B4J237 113 aa10.69□□□□□ -0.7
TRAIP-201ENST00000331456 SMAD7O15105 426 aaKnown RBP10.69□□□□□ -0.7
TRAIP-201ENST00000331456 ELANEP08246 267 aa10.69□□□□□ -0.7
TRAIP-201ENST00000331456 FOXE3Q13461 319 aa10.69□□□□□ -0.7
TRAIP-201ENST00000331456 KIAA1644Q3SXP7 199 aa10.69□□□□□ -0.7
TRAIP-201ENST00000331456 OR10J3Q5JRS4 329 aa10.69□□□□□ -0.7
TRAIP-201ENST00000331456 NIT2Q9NQR4 276 aa10.69□□□□□ -0.7
TRAIP-201ENST00000331456 DAZ1Q9NQZ3 744 aaKnown RBP10.69□□□□□ -0.7
TRAIP-201ENST00000331456 NAV2Q8IVL1 2488 aa10.69□□□□□ -0.7
TRAIP-201ENST00000331456 IGHV7-4-1A0A0J9YVY3 117 aa10.68□□□□□ -0.7
TRAIP-201ENST00000331456 TMEM189A5PLL7 270 aa10.68□□□□□ -0.7
TRAIP-201ENST00000331456 K7EMT4 169 aa10.68□□□□□ -0.7
TRAIP-201ENST00000331456 SH2D1AO60880 128 aa10.68□□□□□ -0.7
TRAIP-201ENST00000331456 TMEM256Q8N2U0 113 aa10.68□□□□□ -0.7
TRAIP-201ENST00000331456 Q8TAT8 98 aa10.68□□□□□ -0.7
TRAIP-201ENST00000331456 POLQO75417 2590 aa10.68□□□□□ -0.7
TRAIP-201ENST00000331456 SVEP1Q4LDE5 3571 aa10.68□□□□□ -0.7
TRAIP-201ENST00000331456 CSMD1Q96PZ7 3565 aa10.68□□□□□ -0.7
TRAIP-201ENST00000331456 PRAC2D3DTV9 90 aa10.68□□□□□ -0.7
TRAIP-201ENST00000331456 GZMBP10144 247 aa10.68□□□□□ -0.7
TRAIP-201ENST00000331456 SLAQ13239 276 aa10.68□□□□□ -0.7
TRAIP-201ENST00000331456 GPHB5Q86YW7 130 aa10.68□□□□□ -0.7
TRAIP-201ENST00000331456 SIGLECL1Q8N7X8 197 aa10.68□□□□□ -0.7
TRAIP-201ENST00000331456 BORCS7Q96B45 105 aa10.68□□□□□ -0.7
TRAIP-201ENST00000331456 CELSR2Q9HCU4 2923 aa10.68□□□□□ -0.7
TRAIP-201ENST00000331456 CSPG4Q6UVK1 2322 aa10.68□□□□□ -0.7
TRAIP-201ENST00000331456 PCP4L1A6NKN8 68 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms