RNA–Protein interactions for RNA: ENST00000330687.8

CMTM4-201, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene CMTM4, Length 3,414 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-201ENST00000330687 OR4C13Q8NGP0 309 aa16.33■□□□□ 0.2
CMTM4-201ENST00000330687 RASL11BQ9BPW5 248 aa16.33■□□□□ 0.2
CMTM4-201ENST00000330687 CNTFRP26992 372 aa16.32■□□□□ 0.2
CMTM4-201ENST00000330687 Q6ZT83 130 aa16.32■□□□□ 0.2
CMTM4-201ENST00000330687 DEFB104AQ8WTQ1 72 aa16.32■□□□□ 0.2
CMTM4-201ENST00000330687 IGKV2-40A0A087WW87 121 aaPredicted RBP16.32■□□□□ 0.2
CMTM4-201ENST00000330687 IGHV1-18A0A0C4DH31 117 aa16.32■□□□□ 0.2
CMTM4-201ENST00000330687 CGB1A6NKQ9 187 aa16.32■□□□□ 0.2
CMTM4-201ENST00000330687 IGKV2D-40P01614 121 aaPredicted RBP16.32■□□□□ 0.2
CMTM4-201ENST00000330687 C8orf46Q8TAG6 207 aa16.32■□□□□ 0.2
CMTM4-201ENST00000330687 TMEM158Q8WZ71 300 aa16.32■□□□□ 0.2
CMTM4-201ENST00000330687 C8orf86Q6ZUL3 223 aa16.32■□□□□ 0.2
CMTM4-201ENST00000330687 ANAPC13Q9BS18 74 aa16.32■□□□□ 0.2
CMTM4-201ENST00000330687 MAP1LC3AQ9H492 121 aa16.32■□□□□ 0.2
CMTM4-201ENST00000330687 B5MCH6 92 aa16.31■□□□□ 0.2
CMTM4-201ENST00000330687 IGLV2-11P01706 119 aa16.31■□□□□ 0.2
CMTM4-201ENST00000330687 TNFAIP6P98066 277 aaPredicted RBP16.31■□□□□ 0.2
CMTM4-201ENST00000330687 VMA21Q3ZAQ7 101 aa16.31■□□□□ 0.2
CMTM4-201ENST00000330687 MAFAQ8NHW3 353 aaPredicted RBP16.31■□□□□ 0.2
CMTM4-201ENST00000330687 IGHV3-35A0A0C4DH35 117 aa16.31■□□□□ 0.2
CMTM4-201ENST00000330687 ZNF562Q6V9R5 426 aa16.31■□□□□ 0.2
CMTM4-201ENST00000330687 PGPEP1Q9NXJ5 209 aa16.31■□□□□ 0.2
CMTM4-201ENST00000330687 MRPL35Q9NZE8 188 aaKnown RBP16.31■□□□□ 0.2
CMTM4-201ENST00000330687 DPF1Q92782 380 aa16.31■□□□□ 0.2
CMTM4-201ENST00000330687 SPATA25Q9BR10 227 aa16.31■□□□□ 0.2
CMTM4-201ENST00000330687 ZNF785A8K8V0 405 aa16.3■□□□□ 0.2
CMTM4-201ENST00000330687 RNF7Q9UBF6 113 aa16.3■□□□□ 0.2
CMTM4-201ENST00000330687 E9PLD3 99 aa16.3■□□□□ 0.2
CMTM4-201ENST00000330687 ATP5IP56385 69 aaPredicted RBP16.3■□□□□ 0.2
CMTM4-201ENST00000330687 DPM2O94777 84 aa16.29■□□□□ 0.2
CMTM4-201ENST00000330687 RPL27AP46776 148 aaKnown RBP16.29■□□□□ 0.2
CMTM4-201ENST00000330687 KLF17Q5JT82 389 aaPredicted RBP16.29■□□□□ 0.2
CMTM4-201ENST00000330687 ODF1Q14990 250 aa16.29■□□□□ 0.2
CMTM4-201ENST00000330687 UFC1Q9Y3C8 167 aa16.29■□□□□ 0.2
CMTM4-201ENST00000330687 SH2D1AO60880 128 aa16.29■□□□□ 0.2
CMTM4-201ENST00000330687 IGKV3-15P01624 115 aa16.29■□□□□ 0.2
CMTM4-201ENST00000330687 RPEQ96AT9 228 aa16.29■□□□□ 0.2
CMTM4-201ENST00000330687 IL4P05112 153 aa16.28■□□□□ 0.2
CMTM4-201ENST00000330687 CGB3P0DN86 165 aa16.28■□□□□ 0.2
CMTM4-201ENST00000330687 CGB7P0DN87 165 aa16.28■□□□□ 0.2
CMTM4-201ENST00000330687 CSMD1Q96PZ7 3565 aa16.28■□□□□ 0.2
CMTM4-201ENST00000330687 MALRD1Q5VYJ5 2156 aa16.28■□□□□ 0.2
CMTM4-201ENST00000330687 SPENQ96T58 3664 aaKnown RBP16.28■□□□□ 0.2
CMTM4-201ENST00000330687 SCGB1D4Q6XE38 83 aa16.28■□□□□ 0.2
CMTM4-201ENST00000330687 THAP8Q8NA92 274 aa16.28■□□□□ 0.2
CMTM4-201ENST00000330687 WI2-2373I1.2A0A1W2PRP0 233 aa16.27■□□□□ 0.2
CMTM4-201ENST00000330687 CNIH1O95406 144 aa16.27■□□□□ 0.2
CMTM4-201ENST00000330687 C3orf36Q3SXR2 165 aa16.27■□□□□ 0.2
CMTM4-201ENST00000330687 PHLDA1Q8WV24 401 aaPredicted RBP16.27■□□□□ 0.2
CMTM4-201ENST00000330687 NGBQ9NPG2 151 aa16.27■□□□□ 0.2
CMTM4-201ENST00000330687 SRSF9Q13242 221 aaKnown RBP eCLIP16.27■□□□□ 0.19
CMTM4-201ENST00000330687 ZNF576Q9H609 170 aa16.27■□□□□ 0.19
CMTM4-201ENST00000330687 C9orf106Q8NAJ2 232 aa16.26■□□□□ 0.19
CMTM4-201ENST00000330687 AAMDCQ9H7C9 122 aa16.26■□□□□ 0.19
CMTM4-201ENST00000330687 PRSS29PA6NIE9 313 aa16.26■□□□□ 0.19
CMTM4-201ENST00000330687 EFNA4P52798 201 aa16.26■□□□□ 0.19
CMTM4-201ENST00000330687 TMEM167AQ8TBQ9 72 aa16.26■□□□□ 0.19
CMTM4-201ENST00000330687 FER1L6-AS2Q96M78 137 aa16.26■□□□□ 0.19
CMTM4-201ENST00000330687 HHLA3Q9XRX5 114 aa16.26■□□□□ 0.19
CMTM4-201ENST00000330687 XGP55808 180 aa16.26■□□□□ 0.19
CMTM4-201ENST00000330687 GAFA1Q96PS6 74 aa16.26■□□□□ 0.19
CMTM4-201ENST00000330687 NCBP2LA6PVI3 153 aaKnown RBP16.25■□□□□ 0.19
CMTM4-201ENST00000330687 FOXI1Q12951 378 aa16.25■□□□□ 0.19
CMTM4-201ENST00000330687 SCNM1Q9BWG6 230 aa16.25■□□□□ 0.19
CMTM4-201ENST00000330687 ABCA4P78363 2273 aa16.25■□□□□ 0.19
CMTM4-201ENST00000330687 TRAV26-2A0A0B4J265 109 aa16.25■□□□□ 0.19
CMTM4-201ENST00000330687 FAM90A27PA6NNH2 459 aa16.25■□□□□ 0.19
CMTM4-201ENST00000330687 ATMQ13315 3056 aa16.25■□□□□ 0.19
CMTM4-201ENST00000330687 ADGRG4Q8IZF6 3080 aa16.25■□□□□ 0.19
CMTM4-201ENST00000330687 LINC01548A6NM66 108 aa16.25■□□□□ 0.19
CMTM4-201ENST00000330687 RRN3P1Q2M238 152 aa16.25■□□□□ 0.19
CMTM4-201ENST00000330687 TCTEX1D4Q5JR98 221 aa16.25■□□□□ 0.19
CMTM4-201ENST00000330687 IGFBPL1Q8WX77 278 aa16.25■□□□□ 0.19
CMTM4-201ENST00000330687 TRGV9Q99603 122 aa16.25■□□□□ 0.19
CMTM4-201ENST00000330687 NBASA2RRP1 2371 aa16.24■□□□□ 0.19
CMTM4-201ENST00000330687 NTN3O00634 580 aaPredicted RBP16.24■□□□□ 0.19
CMTM4-201ENST00000330687 CCL17Q92583 94 aa16.24■□□□□ 0.19
CMTM4-201ENST00000330687 LINC01549A6NIU2 74 aa16.24■□□□□ 0.19
CMTM4-201ENST00000330687 MYOZ3Q8TDC0 251 aa16.24■□□□□ 0.19
CMTM4-201ENST00000330687 FBXL15Q9H469 300 aa16.24■□□□□ 0.19
CMTM4-201ENST00000330687 TRBV20-1A0A075B6N2 111 aa16.23■□□□□ 0.19
CMTM4-201ENST00000330687 IGHV3-23P01764 117 aa16.23■□□□□ 0.19
CMTM4-201ENST00000330687 SCGB1C2P0DMR2 95 aa16.23■□□□□ 0.19
CMTM4-201ENST00000330687 SIT1Q9Y3P8 196 aa16.23■□□□□ 0.19
CMTM4-201ENST00000330687 H7C2G1 150 aa16.23■□□□□ 0.19
CMTM4-201ENST00000330687 HOXA3O43365 443 aaPredicted RBP16.23■□□□□ 0.19
CMTM4-201ENST00000330687 TNFRSF6BO95407 300 aa16.23■□□□□ 0.19
CMTM4-201ENST00000330687 EGR2P11161 476 aaPredicted RBP16.23■□□□□ 0.19
CMTM4-201ENST00000330687 ZFP2Q6ZN57 461 aa16.23■□□□□ 0.19
CMTM4-201ENST00000330687 TRBV19A0A075B6N1 114 aa16.22■□□□□ 0.19
CMTM4-201ENST00000330687 PROCRQ9UNN8 238 aa16.22■□□□□ 0.19
CMTM4-201ENST00000330687 A0A1B0GW15 77 aa16.22■□□□□ 0.19
CMTM4-201ENST00000330687 PRTN3P24158 256 aa16.22■□□□□ 0.19
CMTM4-201ENST00000330687 VKORC1Q9BQB6 163 aa16.22■□□□□ 0.19
CMTM4-201ENST00000330687 ARL3P36405 182 aa16.22■□□□□ 0.19
CMTM4-201ENST00000330687 KIR2DL4Q99706 377 aa16.22■□□□□ 0.19
CMTM4-201ENST00000330687 CCL11P51671 97 aa16.21■□□□□ 0.19
CMTM4-201ENST00000330687 TMEM164Q5U3C3 297 aa16.21■□□□□ 0.19
CMTM4-201ENST00000330687 Q6AWC8 147 aa16.21■□□□□ 0.19
CMTM4-201ENST00000330687 NFE4Q86UQ8 179 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms