RNA–Protein interactions for RNA: ENST00000328933.9

SYNGR1-203, Transcript of synaptogyrin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNGR1, Length 4,391 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-203ENST00000328933 MIEN1Q9BRT3 115 aa11.32□□□□□ -0.6
SYNGR1-203ENST00000328933 SNCGO76070 127 aa11.32□□□□□ -0.6
SYNGR1-203ENST00000328933 PRADC1Q9BSG0 188 aa11.32□□□□□ -0.6
SYNGR1-203ENST00000328933 SUMO2P61956 95 aaKnown RBP11.32□□□□□ -0.6
SYNGR1-203ENST00000328933 IGHV4OR15-8A0A075B7B6 117 aa11.32□□□□□ -0.6
SYNGR1-203ENST00000328933 A0A087WW49 117 aa11.32□□□□□ -0.6
SYNGR1-203ENST00000328933 FNDC10F2Z333 226 aa11.32□□□□□ -0.6
SYNGR1-203ENST00000328933 ERCC8Q13216 396 aa11.32□□□□□ -0.6
SYNGR1-203ENST00000328933 C1orf194Q5T5A4 169 aa11.32□□□□□ -0.6
SYNGR1-203ENST00000328933 Q6YL49 198 aa11.32□□□□□ -0.6
SYNGR1-203ENST00000328933 FNDC4Q9H6D8 234 aaPredicted RBP11.32□□□□□ -0.6
SYNGR1-203ENST00000328933 MYCNOSP40205 109 aa11.31□□□□□ -0.6
SYNGR1-203ENST00000328933 CFHR3Q02985 330 aa11.31□□□□□ -0.6
SYNGR1-203ENST00000328933 ATRQ13535 2644 aa11.31□□□□□ -0.6
SYNGR1-203ENST00000328933 LINC00862A6NCI5 91 aa11.31□□□□□ -0.6
SYNGR1-203ENST00000328933 HIGD1CA8MV81 97 aa11.31□□□□□ -0.6
SYNGR1-203ENST00000328933 MAP1LC3CQ9BXW4 147 aa11.31□□□□□ -0.6
SYNGR1-203ENST00000328933 USP24Q9UPU5 2620 aa11.31□□□□□ -0.6
SYNGR1-203ENST00000328933 PPP1R17O96001 155 aa11.3□□□□□ -0.6
SYNGR1-203ENST00000328933 CD28P10747 220 aa11.3□□□□□ -0.6
SYNGR1-203ENST00000328933 SRP19P09132 144 aaKnown RBP11.3□□□□□ -0.6
SYNGR1-203ENST00000328933 SETXQ7Z333 2677 aaKnown RBP11.3□□□□□ -0.6
SYNGR1-203ENST00000328933 CRPP02741 224 aa11.3□□□□□ -0.6
SYNGR1-203ENST00000328933 FOSL1P15407 271 aa11.3□□□□□ -0.6
SYNGR1-203ENST00000328933 PAPPA-AS1Q5QFB9 102 aa11.3□□□□□ -0.6
SYNGR1-203ENST00000328933 Q6AWC8 147 aa11.3□□□□□ -0.6
SYNGR1-203ENST00000328933 TRAV12-2A0A075B6T6 113 aa11.3□□□□□ -0.6
SYNGR1-203ENST00000328933 DYNAPQ8N1N2 210 aa11.3□□□□□ -0.6
SYNGR1-203ENST00000328933 AMBPP02760 352 aa11.29□□□□□ -0.6
SYNGR1-203ENST00000328933 SRIP30626 198 aa11.29□□□□□ -0.6
SYNGR1-203ENST00000328933 LYPD6Q86Y78 171 aa11.29□□□□□ -0.6
SYNGR1-203ENST00000328933 CBLN1P23435 193 aa11.29□□□□□ -0.6
SYNGR1-203ENST00000328933 SHISA2Q6UWI4 295 aa11.29□□□□□ -0.6
SYNGR1-203ENST00000328933 LYPD1Q8N2G4 141 aa11.29□□□□□ -0.6
SYNGR1-203ENST00000328933 TMEM191AQ9H0A3 160 aa11.29□□□□□ -0.6
SYNGR1-203ENST00000328933 A0A087X0M5 115 aa11.29□□□□□ -0.6
SYNGR1-203ENST00000328933 A0A1B0GX30 115 aa11.29□□□□□ -0.6
SYNGR1-203ENST00000328933 TCTAP57738 103 aa11.29□□□□□ -0.6
SYNGR1-203ENST00000328933 PDE6HQ13956 83 aa11.29□□□□□ -0.6
SYNGR1-203ENST00000328933 ELOBQ15370 118 aa11.29□□□□□ -0.6
SYNGR1-203ENST00000328933 MBD3L1Q8WWY6 194 aa11.29□□□□□ -0.6
SYNGR1-203ENST00000328933 PSMG3-AS1Q96PY0 264 aa11.29□□□□□ -0.6
SYNGR1-203ENST00000328933 VGLL1Q99990 258 aa11.29□□□□□ -0.6
SYNGR1-203ENST00000328933 MRPL18Q9H0U6 180 aaKnown RBP11.29□□□□□ -0.6
SYNGR1-203ENST00000328933 PIFOQ8TCI5 191 aa11.28□□□□□ -0.6
SYNGR1-203ENST00000328933 PRELID3AQ96N28 172 aa11.28□□□□□ -0.6
SYNGR1-203ENST00000328933 Q6ZSV7 163 aa11.28□□□□□ -0.6
SYNGR1-203ENST00000328933 HSPB8Q9UJY1 196 aa11.28□□□□□ -0.6
SYNGR1-203ENST00000328933 KLK9Q9UKQ9 250 aa11.28□□□□□ -0.6
SYNGR1-203ENST00000328933 ZNF491Q8N8L2 437 aa11.28□□□□□ -0.6
SYNGR1-203ENST00000328933 SPAG8Q99932 426 aaPredicted RBP11.28□□□□□ -0.6
SYNGR1-203ENST00000328933 RPL36AP83881 106 aaKnown RBP11.28□□□□□ -0.6
SYNGR1-203ENST00000328933 OCC1Q8TAD7 63 aa11.28□□□□□ -0.6
SYNGR1-203ENST00000328933 RPL36ALQ969Q0 106 aaKnown RBP11.28□□□□□ -0.6
SYNGR1-203ENST00000328933 MEGF9Q9H1U4 602 aa11.28□□□□□ -0.6
SYNGR1-203ENST00000328933 AP5S1Q9NUS5 200 aa11.28□□□□□ -0.6
SYNGR1-203ENST00000328933 PHOX2AO14813 284 aa11.27□□□□□ -0.6
SYNGR1-203ENST00000328933 GZMBP10144 247 aa11.27□□□□□ -0.6
SYNGR1-203ENST00000328933 OR10J3Q5JRS4 329 aa11.27□□□□□ -0.6
SYNGR1-203ENST00000328933 APRG1Q8IVJ8 170 aa11.27□□□□□ -0.6
SYNGR1-203ENST00000328933 OR10D4PQ8NGN7 298 aa11.27□□□□□ -0.6
SYNGR1-203ENST00000328933 TOMM7Q9P0U1 55 aa11.27□□□□□ -0.6
SYNGR1-203ENST00000328933 PAX9P55771 341 aa11.27□□□□□ -0.61
SYNGR1-203ENST00000328933 MBD6Q96DN6 1003 aa11.27□□□□□ -0.61
SYNGR1-203ENST00000328933 SMAD5-AS1Q9Y6J3 95 aa11.27□□□□□ -0.61
SYNGR1-203ENST00000328933 PSCAO43653 123 aa11.27□□□□□ -0.61
SYNGR1-203ENST00000328933 TMEM190Q8WZ59 177 aa11.27□□□□□ -0.61
SYNGR1-203ENST00000328933 FSTL3O95633 263 aa11.26□□□□□ -0.61
SYNGR1-203ENST00000328933 COTL1Q14019 142 aa11.26□□□□□ -0.61
SYNGR1-203ENST00000328933 ZNF876PQ49A33 203 aa11.26□□□□□ -0.61
SYNGR1-203ENST00000328933 ATG2AQ2TAZ0 1938 aa11.26□□□□□ -0.61
SYNGR1-203ENST00000328933 GAGE12BA1L429 117 aa11.26□□□□□ -0.61
SYNGR1-203ENST00000328933 LINC01548A6NM66 108 aa11.26□□□□□ -0.61
SYNGR1-203ENST00000328933 GAGE7O76087 117 aa11.26□□□□□ -0.61
SYNGR1-203ENST00000328933 GAGE12FP0CL80 117 aa11.26□□□□□ -0.61
SYNGR1-203ENST00000328933 GAGE12GP0CL81 117 aa11.26□□□□□ -0.61
SYNGR1-203ENST00000328933 GAGE12IP0CL82 117 aa11.26□□□□□ -0.61
SYNGR1-203ENST00000328933 TCF23Q7RTU1 214 aa11.26□□□□□ -0.61
SYNGR1-203ENST00000328933 IGLV11-55A0A075B6I3 123 aa11.26□□□□□ -0.61
SYNGR1-203ENST00000328933 F6UB75 175 aa11.26□□□□□ -0.61
SYNGR1-203ENST00000328933 CDKN1BP46527 198 aa11.26□□□□□ -0.61
SYNGR1-203ENST00000328933 UTF1Q5T230 341 aa11.26□□□□□ -0.61
SYNGR1-203ENST00000328933 TRANK1O15050 2925 aa11.25□□□□□ -0.61
SYNGR1-203ENST00000328933 LAMA2P24043 3122 aaKnown RBP11.25□□□□□ -0.61
SYNGR1-203ENST00000328933 ODF3BA8MYP8 253 aa11.25□□□□□ -0.61
SYNGR1-203ENST00000328933 COL4A2P08572 1712 aa11.25□□□□□ -0.61
SYNGR1-203ENST00000328933 K7EIM0 57 aa11.25□□□□□ -0.61
SYNGR1-203ENST00000328933 DEFB104AQ8WTQ1 72 aa11.25□□□□□ -0.61
SYNGR1-203ENST00000328933 LINC00479Q96M42 142 aa11.25□□□□□ -0.61
SYNGR1-203ENST00000328933 ST20Q9HBF5 79 aa11.25□□□□□ -0.61
SYNGR1-203ENST00000328933 NIT2Q9NQR4 276 aa11.25□□□□□ -0.61
SYNGR1-203ENST00000328933 CGB3P0DN86 165 aa11.25□□□□□ -0.61
SYNGR1-203ENST00000328933 CGB7P0DN87 165 aa11.25□□□□□ -0.61
SYNGR1-203ENST00000328933 CDX1P47902 265 aaPredicted RBP11.25□□□□□ -0.61
SYNGR1-203ENST00000328933 ODF3L1Q8IXM7 274 aa11.25□□□□□ -0.61
SYNGR1-203ENST00000328933 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.25□□□□□ -0.61
SYNGR1-203ENST00000328933 VAMP8Q9BV40 100 aa11.25□□□□□ -0.61
SYNGR1-203ENST00000328933 IL36BQ9NZH7 164 aa11.25□□□□□ -0.61
SYNGR1-203ENST00000328933 CFHR4Q92496 578 aa11.24□□□□□ -0.61
SYNGR1-203ENST00000328933 C18orf15Q96N68 181 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms