RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 A0A1W2PPI3 338 aa9.41□□□□□ -0.9
SHMT2-201ENST00000328923 C19orf71A6NCJ1 209 aa9.41□□□□□ -0.9
SHMT2-201ENST00000328923 LINC01549A6NIU2 74 aa9.41□□□□□ -0.9
SHMT2-201ENST00000328923 OOSP1A8MZH6 123 aa9.41□□□□□ -0.9
SHMT2-201ENST00000328923 SP1P08047 785 aa9.41□□□□□ -0.9
SHMT2-201ENST00000328923 ARMS2P0C7Q2 107 aa9.41□□□□□ -0.9
SHMT2-201ENST00000328923 KIR2DS2P43631 304 aa9.41□□□□□ -0.9
SHMT2-201ENST00000328923 Q0VFX4 171 aa9.41□□□□□ -0.9
SHMT2-201ENST00000328923 CT83Q5H943 113 aa9.41□□□□□ -0.9
SHMT2-201ENST00000328923 ZC2HC1BQ5TFG8 222 aa9.41□□□□□ -0.9
SHMT2-201ENST00000328923 FAM167A-AS1Q96KT0 104 aa9.41□□□□□ -0.9
SHMT2-201ENST00000328923 EPDR1Q9UM22 224 aa9.41□□□□□ -0.9
SHMT2-201ENST00000328923 IGKV1OR2-108A0A075B7D4 117 aa9.41□□□□□ -0.9
SHMT2-201ENST00000328923 OVOL3O00110 214 aa9.41□□□□□ -0.9
SHMT2-201ENST00000328923 NPFFO15130 113 aa9.41□□□□□ -0.9
SHMT2-201ENST00000328923 ERVK-16P61578 105 aa9.41□□□□□ -0.9
SHMT2-201ENST00000328923 C15orf53Q8NAA6 179 aa9.41□□□□□ -0.9
SHMT2-201ENST00000328923 GFRA4Q9GZZ7 299 aa9.41□□□□□ -0.9
SHMT2-201ENST00000328923 D6R8Y8 96 aa9.4□□□□□ -0.9
SHMT2-201ENST00000328923 J3KT08 172 aa9.4□□□□□ -0.9
SHMT2-201ENST00000328923 PSPNO60542 156 aa9.4□□□□□ -0.9
SHMT2-201ENST00000328923 TCL1BO95988 128 aa9.4□□□□□ -0.9
SHMT2-201ENST00000328923 TBC1D28Q2M2D7 210 aa9.4□□□□□ -0.9
SHMT2-201ENST00000328923 SBSPONQ8IVN8 264 aa9.4□□□□□ -0.9
SHMT2-201ENST00000328923 PRR7Q8TB68 274 aa9.4□□□□□ -0.9
SHMT2-201ENST00000328923 ZMAT4Q9H898 229 aa9.4□□□□□ -0.9
SHMT2-201ENST00000328923 KLK5Q9Y337 293 aaPredicted RBP9.4□□□□□ -0.9
SHMT2-201ENST00000328923 DSPP15924 2871 aaKnown RBP9.4□□□□□ -0.9
SHMT2-201ENST00000328923 AHCTF1Q8WYP5 2266 aa9.4□□□□□ -0.9
SHMT2-201ENST00000328923 A0A1W2PNU3 283 aaPredicted RBP9.4□□□□□ -0.91
SHMT2-201ENST00000328923 IGKCP01834 107 aa9.4□□□□□ -0.91
SHMT2-201ENST00000328923 RFPL3SP0C7P2 107 aa9.4□□□□□ -0.91
SHMT2-201ENST00000328923 PAX8Q06710 450 aa9.4□□□□□ -0.91
SHMT2-201ENST00000328923 FOXF2Q12947 444 aa9.4□□□□□ -0.91
SHMT2-201ENST00000328923 SRSF9Q13242 221 aaKnown RBP eCLIP9.4□□□□□ -0.91
SHMT2-201ENST00000328923 RFESDQ8TAC1 157 aa9.4□□□□□ -0.91
SHMT2-201ENST00000328923 ODF3Q96PU9 254 aa9.4□□□□□ -0.91
SHMT2-201ENST00000328923 MLST8Q9BVC4 326 aa9.4□□□□□ -0.91
SHMT2-201ENST00000328923 NBEAQ8NFP9 2946 aa9.4□□□□□ -0.91
SHMT2-201ENST00000328923 LRRC75A-AS1Q8N1F1 130 aa9.39□□□□□ -0.91
SHMT2-201ENST00000328923 BAALCQ8WXS3 180 aa9.39□□□□□ -0.91
SHMT2-201ENST00000328923 PROCRQ9UNN8 238 aa9.39□□□□□ -0.91
SHMT2-201ENST00000328923 MYMXA0A1B0GTQ4 84 aa9.38□□□□□ -0.91
SHMT2-201ENST00000328923 A0A1B0GUT8 65 aa9.38□□□□□ -0.91
SHMT2-201ENST00000328923 UBE2D3P61077 147 aa9.38□□□□□ -0.91
SHMT2-201ENST00000328923 UBE2D2P62837 147 aa9.38□□□□□ -0.91
SHMT2-201ENST00000328923 POU2AF1Q16633 256 aa9.38□□□□□ -0.91
SHMT2-201ENST00000328923 Q71RC1 249 aaPredicted RBP9.38□□□□□ -0.91
SHMT2-201ENST00000328923 CALYQ9NYX4 217 aa9.38□□□□□ -0.91
SHMT2-201ENST00000328923 CACNA1GO43497 2377 aa9.38□□□□□ -0.91
SHMT2-201ENST00000328923 TMEM213A2RRL7 107 aa9.38□□□□□ -0.91
SHMT2-201ENST00000328923 C15orf61A6NNL5 157 aa9.38□□□□□ -0.91
SHMT2-201ENST00000328923 FCGR3BO75015 233 aa9.38□□□□□ -0.91
SHMT2-201ENST00000328923 PRADC1Q9BSG0 188 aa9.38□□□□□ -0.91
SHMT2-201ENST00000328923 HERVK_113P63121 156 aa9.37□□□□□ -0.91
SHMT2-201ENST00000328923 OR13C6PQ8NH95 151 aa9.37□□□□□ -0.91
SHMT2-201ENST00000328923 DUX5Q96PT3 197 aa9.37□□□□□ -0.91
SHMT2-201ENST00000328923 PAXXQ9BUH6 204 aa9.37□□□□□ -0.91
SHMT2-201ENST00000328923 ZNF492Q9P255 531 aa9.37□□□□□ -0.91
SHMT2-201ENST00000328923 FOXA2Q9Y261 457 aaPredicted RBP9.37□□□□□ -0.91
SHMT2-201ENST00000328923 FREM1Q5H8C1 2179 aa9.37□□□□□ -0.91
SHMT2-201ENST00000328923 DOCK10Q96BY6 2186 aa9.37□□□□□ -0.91
SHMT2-201ENST00000328923 SPINT2O43291 252 aa9.37□□□□□ -0.91
SHMT2-201ENST00000328923 DUSP14O95147 198 aaKnown RBP9.37□□□□□ -0.91
SHMT2-201ENST00000328923 NDUFA7O95182 113 aa9.37□□□□□ -0.91
SHMT2-201ENST00000328923 PRSS1P07477 247 aa9.37□□□□□ -0.91
SHMT2-201ENST00000328923 IGLC6P0CF74 106 aa9.37□□□□□ -0.91
SHMT2-201ENST00000328923 EMP1P54849 157 aa9.37□□□□□ -0.91
SHMT2-201ENST00000328923 ZNF493Q6ZR52 646 aa9.37□□□□□ -0.91
SHMT2-201ENST00000328923 SHISA9B4DS77 424 aa9.36□□□□□ -0.91
SHMT2-201ENST00000328923 SCGB1C2P0DMR2 95 aa9.36□□□□□ -0.91
SHMT2-201ENST00000328923 HES1Q14469 280 aa9.36□□□□□ -0.91
SHMT2-201ENST00000328923 C9orf153Q5TBE3 101 aa9.36□□□□□ -0.91
SHMT2-201ENST00000328923 OR13A1Q8NGR1 328 aa9.36□□□□□ -0.91
SHMT2-201ENST00000328923 TMEM160Q9NX00 188 aa9.36□□□□□ -0.91
SHMT2-201ENST00000328923 IGF2RP11717 2491 aa9.36□□□□□ -0.91
SHMT2-201ENST00000328923 C15orf65H3BRN8 121 aa9.36□□□□□ -0.91
SHMT2-201ENST00000328923 HLA-DRB4P13762 266 aa9.36□□□□□ -0.91
SHMT2-201ENST00000328923 TNFRSF1AP19438 455 aa9.36□□□□□ -0.91
SHMT2-201ENST00000328923 FOXC1Q12948 553 aa9.36□□□□□ -0.91
SHMT2-201ENST00000328923 RIGQ13278 110 aa9.36□□□□□ -0.91
SHMT2-201ENST00000328923 MLANAQ16655 118 aa9.36□□□□□ -0.91
SHMT2-201ENST00000328923 PSMG4Q5JS54 123 aa9.36□□□□□ -0.91
SHMT2-201ENST00000328923 FAM57AQ8TBR7 257 aa9.36□□□□□ -0.91
SHMT2-201ENST00000328923 FOXC2Q99958 501 aa9.36□□□□□ -0.91
SHMT2-201ENST00000328923 TMEM14BQ9NUH8 114 aa9.36□□□□□ -0.91
SHMT2-201ENST00000328923 HLA-DRB4X5D2U9 266 aa9.36□□□□□ -0.91
SHMT2-201ENST00000328923 INTS1Q8N201 2190 aaKnown RBP9.35□□□□□ -0.91
SHMT2-201ENST00000328923 TRAV40A0A0B4J280 105 aa9.35□□□□□ -0.91
SHMT2-201ENST00000328923 IQCF6A8MYZ5 107 aa9.35□□□□□ -0.91
SHMT2-201ENST00000328923 PROP1O75360 226 aa9.35□□□□□ -0.91
SHMT2-201ENST00000328923 HSPE1P61604 102 aaKnown RBP9.35□□□□□ -0.91
SHMT2-201ENST00000328923 LY6DQ14210 128 aa9.35□□□□□ -0.91
SHMT2-201ENST00000328923 SLC25A48Q6ZT89 311 aaKnown RBP9.35□□□□□ -0.91
SHMT2-201ENST00000328923 TRGV9Q99603 122 aa9.35□□□□□ -0.91
SHMT2-201ENST00000328923 PIMREGQ9BSJ6 248 aa9.35□□□□□ -0.91
SHMT2-201ENST00000328923 ZZEF1O43149 2961 aa9.35□□□□□ -0.91
SHMT2-201ENST00000328923 IGHV3-43A0A0B4J1X8 118 aa9.35□□□□□ -0.91
SHMT2-201ENST00000328923 PCNX2A6NKB5 2137 aa9.35□□□□□ -0.91
SHMT2-201ENST00000328923 DEFB108AA8MXU0 73 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms