RNA–Protein interactions for RNA: ENST00000326956.11

SSBP3-201, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 2

Gene SSBP3, Length 2,913 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-201ENST00000326956 PDE6HQ13956 83 aa11.51□□□□□ -0.57
SSBP3-201ENST00000326956 OR2K2Q8NGT1 345 aa11.51□□□□□ -0.57
SSBP3-201ENST00000326956 RNF5Q99942 180 aa11.51□□□□□ -0.57
SSBP3-201ENST00000326956 A0A0G2JLM5 398 aa11.5□□□□□ -0.57
SSBP3-201ENST00000326956 FER1L6-AS1Q8NA97 138 aa11.5□□□□□ -0.57
SSBP3-201ENST00000326956 GVINP1Q7Z2Y8 2422 aa11.5□□□□□ -0.57
SSBP3-201ENST00000326956 SMKR1H3BMG3 65 aa11.5□□□□□ -0.57
SSBP3-201ENST00000326956 CIDEAO60543 219 aa11.5□□□□□ -0.57
SSBP3-201ENST00000326956 CUL9Q8IWT3 2517 aa11.5□□□□□ -0.57
SSBP3-201ENST00000326956 SAP30O75446 220 aa11.49□□□□□ -0.57
SSBP3-201ENST00000326956 KLF17Q5JT82 389 aaPredicted RBP11.49□□□□□ -0.57
SSBP3-201ENST00000326956 WFDC3Q8IUB2 231 aa11.49□□□□□ -0.57
SSBP3-201ENST00000326956 CSTL1Q9H114 145 aa11.49□□□□□ -0.57
SSBP3-201ENST00000326956 ONECUT1Q9UBC0 465 aa11.49□□□□□ -0.57
SSBP3-201ENST00000326956 POLEQ07864 2286 aa11.49□□□□□ -0.57
SSBP3-201ENST00000326956 IGKV2-40A0A087WW87 121 aaPredicted RBP11.49□□□□□ -0.57
SSBP3-201ENST00000326956 TIMM23O14925 209 aa11.49□□□□□ -0.57
SSBP3-201ENST00000326956 SIVA1O15304 175 aa11.49□□□□□ -0.57
SSBP3-201ENST00000326956 IGKV2D-40P01614 121 aaPredicted RBP11.49□□□□□ -0.57
SSBP3-201ENST00000326956 HES1Q14469 280 aa11.49□□□□□ -0.57
SSBP3-201ENST00000326956 U3KQK5 164 aa11.49□□□□□ -0.57
SSBP3-201ENST00000326956 K7EP34 96 aa11.49□□□□□ -0.57
SSBP3-201ENST00000326956 S100A7P31151 101 aa11.49□□□□□ -0.57
SSBP3-201ENST00000326956 BMI1P35226 326 aa11.49□□□□□ -0.57
SSBP3-201ENST00000326956 MFAP4P55083 255 aa11.49□□□□□ -0.57
SSBP3-201ENST00000326956 C18orf15Q96N68 181 aa11.49□□□□□ -0.57
SSBP3-201ENST00000326956 LYNX1G3V0Z9 82 aa11.48□□□□□ -0.57
SSBP3-201ENST00000326956 NPYP01303 97 aa11.48□□□□□ -0.57
SSBP3-201ENST00000326956 LYNX1P0DP58 116 aa11.48□□□□□ -0.57
SSBP3-201ENST00000326956 E7EQL1 145 aa11.48□□□□□ -0.57
SSBP3-201ENST00000326956 MAP1LC3AQ9H492 121 aa11.48□□□□□ -0.57
SSBP3-201ENST00000326956 WI2-2373I1.2A0A1W2PRP0 233 aa11.47□□□□□ -0.57
SSBP3-201ENST00000326956 NBR2O15453 112 aa11.47□□□□□ -0.57
SSBP3-201ENST00000326956 ORM1P02763 201 aa11.47□□□□□ -0.57
SSBP3-201ENST00000326956 RPL7P18124 248 aaKnown RBP11.47□□□□□ -0.57
SSBP3-201ENST00000326956 RIPPLY3P57055 190 aa11.47□□□□□ -0.57
SSBP3-201ENST00000326956 PCP2Q8IVA1 136 aa11.47□□□□□ -0.57
SSBP3-201ENST00000326956 JKAMPQ9P055 326 aa11.47□□□□□ -0.57
SSBP3-201ENST00000326956 SPCS1Q9Y6A9 102 aa11.47□□□□□ -0.57
SSBP3-201ENST00000326956 NPIPB5A8MRT5 1133 aa11.47□□□□□ -0.57
SSBP3-201ENST00000326956 MRPS12O15235 138 aaKnown RBP11.47□□□□□ -0.57
SSBP3-201ENST00000326956 PRSS57Q6UWY2 283 aa11.47□□□□□ -0.57
SSBP3-201ENST00000326956 PIP4P2Q8N4L2 257 aa11.47□□□□□ -0.57
SSBP3-201ENST00000326956 JMJD8Q96S16 334 aa11.47□□□□□ -0.57
SSBP3-201ENST00000326956 FBLL1A6NHQ2 334 aaKnown RBP11.46□□□□□ -0.57
SSBP3-201ENST00000326956 NDUFS7O75251 213 aa11.46□□□□□ -0.57
SSBP3-201ENST00000326956 PRSS1P07477 247 aa11.46□□□□□ -0.57
SSBP3-201ENST00000326956 TM4SF20Q53R12 229 aa11.46□□□□□ -0.57
SSBP3-201ENST00000326956 UFSP1Q6NVU6 142 aa11.46□□□□□ -0.57
SSBP3-201ENST00000326956 GFRALQ6UXV0 394 aa11.46□□□□□ -0.57
SSBP3-201ENST00000326956 PRR25Q96S07 402 aa11.46□□□□□ -0.57
SSBP3-201ENST00000326956 ZFHX4Q86UP3 3567 aa11.46□□□□□ -0.57
SSBP3-201ENST00000326956 ACACAQ13085 2346 aa11.46□□□□□ -0.57
SSBP3-201ENST00000326956 BOD1L1Q8NFC6 3051 aa11.46□□□□□ -0.57
SSBP3-201ENST00000326956 SCGB2A1O75556 95 aa11.46□□□□□ -0.57
SSBP3-201ENST00000326956 FABP2P12104 132 aa11.46□□□□□ -0.57
SSBP3-201ENST00000326956 Q8TAT8 98 aa11.46□□□□□ -0.57
SSBP3-201ENST00000326956 DKK2Q9UBU2 259 aa11.46□□□□□ -0.57
SSBP3-201ENST00000326956 EGR2P11161 476 aaPredicted RBP11.46□□□□□ -0.58
SSBP3-201ENST00000326956 GCSHP23434 173 aa11.46□□□□□ -0.58
SSBP3-201ENST00000326956 BCL6BQ8N143 479 aaPredicted RBP11.46□□□□□ -0.58
SSBP3-201ENST00000326956 OR5A1Q8NGJ0 315 aa11.46□□□□□ -0.58
SSBP3-201ENST00000326956 OTOGLQ3ZCN5 2332 aa11.45□□□□□ -0.58
SSBP3-201ENST00000326956 WNK2Q9Y3S1 2297 aa11.45□□□□□ -0.58
SSBP3-201ENST00000326956 SHISA9B4DS77 424 aa11.45□□□□□ -0.58
SSBP3-201ENST00000326956 B9A039 149 aa11.45□□□□□ -0.58
SSBP3-201ENST00000326956 SMIM13P0DJ93 91 aa11.45□□□□□ -0.58
SSBP3-201ENST00000326956 ADAMTSL5Q6ZMM2 481 aa11.45□□□□□ -0.58
SSBP3-201ENST00000326956 A0A1W2PPM0 123 aa11.44□□□□□ -0.58
SSBP3-201ENST00000326956 LEPP41159 167 aa11.44□□□□□ -0.58
SSBP3-201ENST00000326956 C21orf62Q9NYP8 219 aa11.44□□□□□ -0.58
SSBP3-201ENST00000326956 DPM3Q9P2X0 92 aa11.44□□□□□ -0.58
SSBP3-201ENST00000326956 ASPMQ8IZT6 3477 aa11.44□□□□□ -0.58
SSBP3-201ENST00000326956 CEACAM3P40198 252 aa11.44□□□□□ -0.58
SSBP3-201ENST00000326956 CD3EP07766 207 aa11.43□□□□□ -0.58
SSBP3-201ENST00000326956 PSMG4Q5JS54 123 aa11.43□□□□□ -0.58
SSBP3-201ENST00000326956 IGHV3-23P01764 117 aa11.43□□□□□ -0.58
SSBP3-201ENST00000326956 APC2O95996 2303 aa11.43□□□□□ -0.58
SSBP3-201ENST00000326956 SAMD5Q5TGI4 173 aa11.42□□□□□ -0.58
SSBP3-201ENST00000326956 IGFL4Q6B9Z1 124 aa11.42□□□□□ -0.58
SSBP3-201ENST00000326956 IGF2-ASQ6U949 168 aa11.42□□□□□ -0.58
SSBP3-201ENST00000326956 VGLL1Q99990 258 aa11.42□□□□□ -0.58
SSBP3-201ENST00000326956 NCBP2LA6PVI3 153 aaKnown RBP11.42□□□□□ -0.58
SSBP3-201ENST00000326956 G3V4G9 280 aa11.42□□□□□ -0.58
SSBP3-201ENST00000326956 NXT2Q9NPJ8 142 aaKnown RBP11.42□□□□□ -0.58
SSBP3-201ENST00000326956 FABP5P3A8MUU1 101 aa11.42□□□□□ -0.58
SSBP3-201ENST00000326956 LY6LH3BQJ8 138 aa11.42□□□□□ -0.58
SSBP3-201ENST00000326956 RPL24P83731 157 aaKnown RBP11.42□□□□□ -0.58
SSBP3-201ENST00000326956 MSRB1Q9NZV6 116 aa11.42□□□□□ -0.58
SSBP3-201ENST00000326956 FCER1GP30273 86 aa11.41□□□□□ -0.58
SSBP3-201ENST00000326956 C5orf64Q2M2E5 130 aa11.41□□□□□ -0.58
SSBP3-201ENST00000326956 ARPC1AQ92747 370 aa11.41□□□□□ -0.58
SSBP3-201ENST00000326956 J3KRW8 73 aa11.41□□□□□ -0.58
SSBP3-201ENST00000326956 EVI2AP22794 236 aa11.41□□□□□ -0.58
SSBP3-201ENST00000326956 ZNF80P51504 273 aaPredicted RBP11.41□□□□□ -0.58
SSBP3-201ENST00000326956 ABHD17AQ96GS6 310 aa11.41□□□□□ -0.58
SSBP3-201ENST00000326956 IGKCP01834 107 aa11.4□□□□□ -0.58
SSBP3-201ENST00000326956 IGLC6P0CF74 106 aa11.4□□□□□ -0.58
SSBP3-201ENST00000326956 PAX8Q06710 450 aa11.4□□□□□ -0.58
SSBP3-201ENST00000326956 FANCD2OSQ96PS1 177 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 166.8 ms