RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 PRR20CP86479 221 aa9.93□□□□□ -0.82
DDX39A-202ENST00000324340 PRR20DP86480 221 aa9.93□□□□□ -0.82
DDX39A-202ENST00000324340 PRR20BP86481 221 aa9.93□□□□□ -0.82
DDX39A-202ENST00000324340 PRR20AP86496 221 aa9.93□□□□□ -0.82
DDX39A-202ENST00000324340 PSG3Q16557 428 aa9.93□□□□□ -0.82
DDX39A-202ENST00000324340 ESM1Q9NQ30 184 aa9.93□□□□□ -0.82
DDX39A-202ENST00000324340 V9GYV3 84 aa9.93□□□□□ -0.82
DDX39A-202ENST00000324340 TRBV20OR9-2A0A075B6H5 130 aa9.92□□□□□ -0.82
DDX39A-202ENST00000324340 TCRBV4S1A1TA0A5B7 111 aa9.92□□□□□ -0.82
DDX39A-202ENST00000324340 ISLRO14498 428 aa9.92□□□□□ -0.82
DDX39A-202ENST00000324340 TAX1BP3O14907 124 aa9.92□□□□□ -0.82
DDX39A-202ENST00000324340 CRXO43186 299 aaPredicted RBP9.92□□□□□ -0.82
DDX39A-202ENST00000324340 OR2J3O76001 311 aa9.92□□□□□ -0.82
DDX39A-202ENST00000324340 IGLV1-40P01703 118 aa9.92□□□□□ -0.82
DDX39A-202ENST00000324340 IGHV3-48P01763 117 aa9.92□□□□□ -0.82
DDX39A-202ENST00000324340 FCGR2BP31994 310 aaPredicted RBP9.92□□□□□ -0.82
DDX39A-202ENST00000324340 ATP5G3P48201 142 aa9.92□□□□□ -0.82
DDX39A-202ENST00000324340 HILS1P60008 231 aa9.92□□□□□ -0.82
DDX39A-202ENST00000324340 ZNF418Q8TF45 676 aaPredicted RBP9.92□□□□□ -0.82
DDX39A-202ENST00000324340 TSKUQ8WUA8 353 aa9.92□□□□□ -0.82
DDX39A-202ENST00000324340 DUX5Q96PT3 197 aa9.92□□□□□ -0.82
DDX39A-202ENST00000324340 TRGV9Q99603 122 aa9.92□□□□□ -0.82
DDX39A-202ENST00000324340 PEF1Q9UBV8 284 aaKnown RBP9.92□□□□□ -0.82
DDX39A-202ENST00000324340 NAT8BQ9UHF3 227 aa9.92□□□□□ -0.82
DDX39A-202ENST00000324340 LINC00527Q9UJ94 153 aa9.92□□□□□ -0.82
DDX39A-202ENST00000324340 IGHV3-21A0A0B4J1V1 117 aa9.91□□□□□ -0.82
DDX39A-202ENST00000324340 FAM223BA6NKX1 122 aa9.91□□□□□ -0.82
DDX39A-202ENST00000324340 F8W735 103 aaPredicted RBP9.91□□□□□ -0.82
DDX39A-202ENST00000324340 RNASE1P07998 156 aaKnown RBP9.91□□□□□ -0.82
DDX39A-202ENST00000324340 IGLC1P0CG04 106 aa9.91□□□□□ -0.82
DDX39A-202ENST00000324340 BMI1P35226 326 aa9.91□□□□□ -0.82
DDX39A-202ENST00000324340 MIC13Q5XKP0 118 aa9.91□□□□□ -0.82
DDX39A-202ENST00000324340 FAM223AQ8IWN6 122 aa9.91□□□□□ -0.82
DDX39A-202ENST00000324340 ATP6V0BQ99437 205 aa9.91□□□□□ -0.82
DDX39A-202ENST00000324340 MS4A6AQ9H2W1 248 aa9.91□□□□□ -0.82
DDX39A-202ENST00000324340 C21orf62Q9NYP8 219 aa9.91□□□□□ -0.82
DDX39A-202ENST00000324340 RNF114Q9Y508 228 aa9.91□□□□□ -0.82
DDX39A-202ENST00000324340 TEP1Q99973 2627 aaKnown RBP9.9□□□□□ -0.82
DDX39A-202ENST00000324340 TMEM89A2RUT3 159 aa9.9□□□□□ -0.82
DDX39A-202ENST00000324340 INAFM1C9JVW0 142 aa9.9□□□□□ -0.82
DDX39A-202ENST00000324340 IGHG4P01861 327 aa9.9□□□□□ -0.82
DDX39A-202ENST00000324340 PMCHP20382 165 aa9.9□□□□□ -0.82
DDX39A-202ENST00000324340 MFAP4P55083 255 aa9.9□□□□□ -0.82
DDX39A-202ENST00000324340 UBE2G1P62253 170 aa9.9□□□□□ -0.82
DDX39A-202ENST00000324340 C15orf32Q32M92 178 aa9.9□□□□□ -0.82
DDX39A-202ENST00000324340 TMEM95Q3KNT9 176 aa9.9□□□□□ -0.82
DDX39A-202ENST00000324340 STPG3Q8N7X2 389 aa9.9□□□□□ -0.82
DDX39A-202ENST00000324340 CHRDL1Q9BU40 450 aa9.9□□□□□ -0.82
DDX39A-202ENST00000324340 ZNF355PQ9NSJ1 428 aa9.9□□□□□ -0.82
DDX39A-202ENST00000324340 ACANP16112 2415 aa9.9□□□□□ -0.82
DDX39A-202ENST00000324340 SMIM27A0A1W2PRY6 76 aa9.89□□□□□ -0.83
DDX39A-202ENST00000324340 IZUMO1RA6ND01 250 aa9.89□□□□□ -0.83
DDX39A-202ENST00000324340 FAM181BA6NEQ2 426 aa9.89□□□□□ -0.83
DDX39A-202ENST00000324340 BMPR1BO00238 502 aa9.89□□□□□ -0.83
DDX39A-202ENST00000324340 IGKV1-17P01599 117 aa9.89□□□□□ -0.83
DDX39A-202ENST00000324340 APCSP02743 223 aa9.89□□□□□ -0.83
DDX39A-202ENST00000324340 SMIM17P0DL12 118 aa9.89□□□□□ -0.83
DDX39A-202ENST00000324340 SEC11AP67812 179 aa9.89□□□□□ -0.83
DDX39A-202ENST00000324340 GTF2H5Q6ZYL4 71 aa9.89□□□□□ -0.83
DDX39A-202ENST00000324340 ZNF502Q8TBZ5 544 aa9.89□□□□□ -0.83
DDX39A-202ENST00000324340 USMG5Q96IX5 58 aa9.89□□□□□ -0.83
DDX39A-202ENST00000324340 JMJD8Q96S16 334 aa9.89□□□□□ -0.83
DDX39A-202ENST00000324340 SERTAD4Q9NUC0 356 aa9.89□□□□□ -0.83
DDX39A-202ENST00000324340 TRBV7-1A0A0A6YYK4 115 aa9.88□□□□□ -0.83
DDX39A-202ENST00000324340 PSMB11A5LHX3 300 aa9.88□□□□□ -0.83
DDX39A-202ENST00000324340 HMGB3O15347 200 aaKnown RBP9.88□□□□□ -0.83
DDX39A-202ENST00000324340 CRLF1O75462 422 aa9.88□□□□□ -0.83
DDX39A-202ENST00000324340 TRGV3P03979 118 aa9.88□□□□□ -0.83
DDX39A-202ENST00000324340 OR5AL1P0C617 328 aa9.88□□□□□ -0.83
DDX39A-202ENST00000324340 CRYBB3P26998 211 aa9.88□□□□□ -0.83
DDX39A-202ENST00000324340 PSMB8P28062 276 aa9.88□□□□□ -0.83
DDX39A-202ENST00000324340 BVES-AS1Q5T3Y7 98 aa9.88□□□□□ -0.83
DDX39A-202ENST00000324340 SLC25A34Q6PIV7 304 aa9.88□□□□□ -0.83
DDX39A-202ENST00000324340 Q71RC1 249 aaPredicted RBP9.88□□□□□ -0.83
DDX39A-202ENST00000324340 EEF1AKMT3Q96AZ1 226 aa9.88□□□□□ -0.83
DDX39A-202ENST00000324340 DERL1Q9BUN8 251 aa9.88□□□□□ -0.83
DDX39A-202ENST00000324340 TMEM167BQ9NRX6 74 aa9.88□□□□□ -0.83
DDX39A-202ENST00000324340 MXRA5Q9NR99 2828 aa9.88□□□□□ -0.83
DDX39A-202ENST00000324340 SCO2A0A1W2PP80 73 aa9.88□□□□□ -0.83
DDX39A-202ENST00000324340 F2Z2F3 143 aa9.88□□□□□ -0.83
DDX39A-202ENST00000324340 K7EN84 100 aa9.88□□□□□ -0.83
DDX39A-202ENST00000324340 HSBP1O75506 76 aa9.88□□□□□ -0.83
DDX39A-202ENST00000324340 IGLL1P15814 213 aa9.88□□□□□ -0.83
DDX39A-202ENST00000324340 GATA2P23769 480 aaPredicted RBP9.88□□□□□ -0.83
DDX39A-202ENST00000324340 GCHFRP30047 84 aa9.88□□□□□ -0.83
DDX39A-202ENST00000324340 PLP1P60201 277 aa9.88□□□□□ -0.83
DDX39A-202ENST00000324340 HIST1H1AQ02539 215 aaPredicted RBP9.88□□□□□ -0.83
DDX39A-202ENST00000324340 ATP5G2Q06055 141 aa9.88□□□□□ -0.83
DDX39A-202ENST00000324340 TIGITQ495A1 244 aa9.88□□□□□ -0.83
DDX39A-202ENST00000324340 Q6ZSV7 163 aa9.88□□□□□ -0.83
DDX39A-202ENST00000324340 ATP5L2Q7Z4Y8 100 aa9.88□□□□□ -0.83
DDX39A-202ENST00000324340 OR8I2Q8N0Y5 310 aa9.88□□□□□ -0.83
DDX39A-202ENST00000324340 DPF1Q92782 380 aa9.88□□□□□ -0.83
DDX39A-202ENST00000324340 CCDC140Q96MF4 163 aa9.88□□□□□ -0.83
DDX39A-202ENST00000324340 TMEM70Q9BUB7 260 aa9.88□□□□□ -0.83
DDX39A-202ENST00000324340 C19orf24Q9BVV8 132 aa9.88□□□□□ -0.83
DDX39A-202ENST00000324340 ZNF331Q9NQX6 463 aaPredicted RBP9.88□□□□□ -0.83
DDX39A-202ENST00000324340 RPH3ALQ9UNE2 315 aa9.88□□□□□ -0.83
DDX39A-202ENST00000324340 S4R3C0 116 aa9.88□□□□□ -0.83
DDX39A-202ENST00000324340 GAGE12BA1L429 117 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms