RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 HRNRQ86YZ3 2850 aaPredicted RBP17.36■□□□□ 0.37
PNKP-201ENST00000322344 CLEC3BP05452 202 aa17.35■□□□□ 0.37
PNKP-201ENST00000322344 GNLYP22749 145 aa17.35■□□□□ 0.37
PNKP-201ENST00000322344 UQCRFS1P47985 274 aa17.35■□□□□ 0.37
PNKP-201ENST00000322344 EEF1AKMT3Q96AZ1 226 aa17.35■□□□□ 0.37
PNKP-201ENST00000322344 PRB4P10163 310 aaPredicted RBP17.35■□□□□ 0.37
PNKP-201ENST00000322344 ATOH7Q8N100 152 aa17.35■□□□□ 0.37
PNKP-201ENST00000322344 PIP4P2Q8N4L2 257 aa17.35■□□□□ 0.37
PNKP-201ENST00000322344 TPPP3Q9BW30 176 aa17.35■□□□□ 0.37
PNKP-201ENST00000322344 SRSF2Q01130 221 aaKnown RBP17.34■□□□□ 0.37
PNKP-201ENST00000322344 DCHS2Q6V1P9 2916 aa17.33■□□□□ 0.37
PNKP-201ENST00000322344 TRBV7-1A0A0A6YYK4 115 aa17.33■□□□□ 0.37
PNKP-201ENST00000322344 SYS1-DBNDD2H3BUS1 97 aa17.33■□□□□ 0.37
PNKP-201ENST00000322344 IGHG4P01861 327 aa17.33■□□□□ 0.37
PNKP-201ENST00000322344 HNRNPA3P51991 378 aaKnown RBP17.33■□□□□ 0.37
PNKP-201ENST00000322344 LYZL1Q6UWQ5 148 aa17.33■□□□□ 0.37
PNKP-201ENST00000322344 Q6ZN92 141 aa17.33■□□□□ 0.37
PNKP-201ENST00000322344 C5orf56Q8N8D9 126 aa17.33■□□□□ 0.37
PNKP-201ENST00000322344 BUB3O43684 328 aa17.33■□□□□ 0.36
PNKP-201ENST00000322344 SLC50A1Q9BRV3 221 aa17.33■□□□□ 0.36
PNKP-201ENST00000322344 HSPB8Q9UJY1 196 aa17.33■□□□□ 0.36
PNKP-201ENST00000322344 IGHV4-39P01824 125 aa17.32■□□□□ 0.36
PNKP-201ENST00000322344 PAX8Q06710 450 aa17.32■□□□□ 0.36
PNKP-201ENST00000322344 ATP6V0BQ99437 205 aa17.32■□□□□ 0.36
PNKP-201ENST00000322344 ATRXP46100 2492 aa17.32■□□□□ 0.36
PNKP-201ENST00000322344 CCDC140Q96MF4 163 aa17.31■□□□□ 0.36
PNKP-201ENST00000322344 VGLL1Q99990 258 aa17.31■□□□□ 0.36
PNKP-201ENST00000322344 IGHV3-35A0A0C4DH35 117 aa17.31■□□□□ 0.36
PNKP-201ENST00000322344 RBAKDNA6NC62 111 aa17.31■□□□□ 0.36
PNKP-201ENST00000322344 G3V318 75 aa17.31■□□□□ 0.36
PNKP-201ENST00000322344 MAP1LC3CQ9BXW4 147 aa17.31■□□□□ 0.36
PNKP-201ENST00000322344 MOB4Q9Y3A3 225 aa17.31■□□□□ 0.36
PNKP-201ENST00000322344 TMSB15BA0A087X1C1 80 aa17.3■□□□□ 0.36
PNKP-201ENST00000322344 PET117Q6UWS5 81 aa17.3■□□□□ 0.36
PNKP-201ENST00000322344 CLEC19AQ6UXS0 136 aa17.3■□□□□ 0.36
PNKP-201ENST00000322344 SPATA12Q7Z6I5 190 aa17.3■□□□□ 0.36
PNKP-201ENST00000322344 AP5S1Q9NUS5 200 aa17.3■□□□□ 0.36
PNKP-201ENST00000322344 IGHV3OR16-8A0A075B7F1 116 aa17.3■□□□□ 0.36
PNKP-201ENST00000322344 OR4C46A6NHA9 309 aa17.3■□□□□ 0.36
PNKP-201ENST00000322344 MAJINQ3KP22 176 aa17.3■□□□□ 0.36
PNKP-201ENST00000322344 TMEM191AQ9H0A3 160 aa17.3■□□□□ 0.36
PNKP-201ENST00000322344 U3KQK5 164 aa17.3■□□□□ 0.36
PNKP-201ENST00000322344 CSN3P07498 182 aa17.29■□□□□ 0.36
PNKP-201ENST00000322344 HLA-DMBP28068 263 aa17.29■□□□□ 0.36
PNKP-201ENST00000322344 ZNF138P52744 262 aa17.29■□□□□ 0.36
PNKP-201ENST00000322344 COL5A1-AS1Q5SY13 56 aa17.29■□□□□ 0.36
PNKP-201ENST00000322344 FAM104BQ5XKR9 115 aa17.29■□□□□ 0.36
PNKP-201ENST00000322344 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa17.29■□□□□ 0.36
PNKP-201ENST00000322344 FA2HQ7L5A8 372 aa17.29■□□□□ 0.36
PNKP-201ENST00000322344 Q8TAT8 98 aa17.29■□□□□ 0.36
PNKP-201ENST00000322344 NBASA2RRP1 2371 aa17.29■□□□□ 0.36
PNKP-201ENST00000322344 CLPSL1A2RUU4 121 aa17.28■□□□□ 0.36
PNKP-201ENST00000322344 LINC01548A6NM66 108 aa17.28■□□□□ 0.36
PNKP-201ENST00000322344 IGFL4Q6B9Z1 124 aa17.28■□□□□ 0.36
PNKP-201ENST00000322344 PIMREGQ9BSJ6 248 aa17.28■□□□□ 0.36
PNKP-201ENST00000322344 MRPS16Q9Y3D3 137 aaKnown RBP17.28■□□□□ 0.36
PNKP-201ENST00000322344 IGHV1-69DA0A0B4J2H0 117 aa17.28■□□□□ 0.36
PNKP-201ENST00000322344 IGHV1-69P01742 117 aa17.28■□□□□ 0.36
PNKP-201ENST00000322344 IGLL1P15814 213 aa17.28■□□□□ 0.36
PNKP-201ENST00000322344 CRIP2P52943 208 aaPredicted RBP17.28■□□□□ 0.36
PNKP-201ENST00000322344 ATP5G2Q06055 141 aa17.28■□□□□ 0.36
PNKP-201ENST00000322344 BATFQ16520 125 aa17.28■□□□□ 0.36
PNKP-201ENST00000322344 LINC00173Q6ZV60 143 aa17.28■□□□□ 0.36
PNKP-201ENST00000322344 FER1L6-AS1Q8NA97 138 aa17.28■□□□□ 0.36
PNKP-201ENST00000322344 PRSS3P2Q8NHM4 247 aa17.28■□□□□ 0.36
PNKP-201ENST00000322344 METTL26Q96S19 204 aa17.28■□□□□ 0.36
PNKP-201ENST00000322344 IGLC6P0CF74 106 aa17.27■□□□□ 0.36
PNKP-201ENST00000322344 ZNF80P51504 273 aaPredicted RBP17.27■□□□□ 0.36
PNKP-201ENST00000322344 LAMTOR2Q9Y2Q5 125 aa17.27■□□□□ 0.36
PNKP-201ENST00000322344 COL6A6A6NMZ7 2263 aa17.27■□□□□ 0.36
PNKP-201ENST00000322344 RELNP78509 3460 aa17.27■□□□□ 0.35
PNKP-201ENST00000322344 TMEM213A2RRL7 107 aa17.26■□□□□ 0.35
PNKP-201ENST00000322344 FAM223BA6NKX1 122 aa17.26■□□□□ 0.35
PNKP-201ENST00000322344 FABP5P3A8MUU1 101 aa17.26■□□□□ 0.35
PNKP-201ENST00000322344 TSPOP30536 169 aa17.26■□□□□ 0.35
PNKP-201ENST00000322344 FAM223AQ8IWN6 122 aa17.26■□□□□ 0.35
PNKP-201ENST00000322344 MRPL53Q96EL3 112 aaKnown RBP17.26■□□□□ 0.35
PNKP-201ENST00000322344 ST20Q9HBF5 79 aa17.26■□□□□ 0.35
PNKP-201ENST00000322344 TRAV41A0A0B4J266 112 aa17.26■□□□□ 0.35
PNKP-201ENST00000322344 ORMDL3Q8N138 153 aa17.26■□□□□ 0.35
PNKP-201ENST00000322344 TACC2O95359 2948 aa17.26■□□□□ 0.35
PNKP-201ENST00000322344 C19orf54Q5BKX5 351 aa17.25■□□□□ 0.35
PNKP-201ENST00000322344 OR10AG1Q8NH19 301 aa17.25■□□□□ 0.35
PNKP-201ENST00000322344 HIVEP3Q5T1R4 2406 aa17.25■□□□□ 0.35
PNKP-201ENST00000322344 D6R8Y8 96 aa17.25■□□□□ 0.35
PNKP-201ENST00000322344 PRELID3AQ96N28 172 aa17.25■□□□□ 0.35
PNKP-201ENST00000322344 U3KQE9 123 aa17.25■□□□□ 0.35
PNKP-201ENST00000322344 NDUFS8O00217 210 aa17.24■□□□□ 0.35
PNKP-201ENST00000322344 MEGF9Q9H1U4 602 aa17.24■□□□□ 0.35
PNKP-201ENST00000322344 TMEM219Q86XT9 240 aa17.23■□□□□ 0.35
PNKP-201ENST00000322344 AMN1Q8IY45 258 aa17.23■□□□□ 0.35
PNKP-201ENST00000322344 HIF1ANQ9NWT6 349 aa17.23■□□□□ 0.35
PNKP-201ENST00000322344 HSBP1L1C9JCN9 74 aa17.23■□□□□ 0.35
PNKP-201ENST00000322344 ZNF25P17030 456 aaPredicted RBP17.23■□□□□ 0.35
PNKP-201ENST00000322344 LINC01559Q495D7 138 aa17.23■□□□□ 0.35
PNKP-201ENST00000322344 MRPL51Q4U2R6 128 aaKnown RBP17.23■□□□□ 0.35
PNKP-201ENST00000322344 CNFNQ9BYD5 112 aa17.23■□□□□ 0.35
PNKP-201ENST00000322344 PRAC2D3DTV9 90 aa17.22■□□□□ 0.35
PNKP-201ENST00000322344 ORM1P02763 201 aa17.22■□□□□ 0.35
PNKP-201ENST00000322344 ERCC8Q13216 396 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms