RNA–Protein interactions for RNA: ENST00000318024.8

USH1C-202, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USH1C, Length 2,237 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-202ENST00000318024 TNFRSF14Q92956 283 aa12.53□□□□□ -0.4
USH1C-202ENST00000318024 RPEQ96AT9 228 aa12.53□□□□□ -0.4
USH1C-202ENST00000318024 MAP1LC3CQ9BXW4 147 aa12.53□□□□□ -0.4
USH1C-202ENST00000318024 SUB1P53999 127 aaKnown RBP eCLIP12.52□□□□□ -0.41
USH1C-202ENST00000318024 PLP1P60201 277 aa12.52□□□□□ -0.41
USH1C-202ENST00000318024 Q71RC1 249 aaPredicted RBP12.52□□□□□ -0.41
USH1C-202ENST00000318024 VSTM2AQ8TAG5 236 aa12.52□□□□□ -0.41
USH1C-202ENST00000318024 TMUB1Q9BVT8 246 aa12.52□□□□□ -0.41
USH1C-202ENST00000318024 A0A087X0K7 114 aa12.52□□□□□ -0.41
USH1C-202ENST00000318024 IGHV1-3A0A0C4DH29 117 aa12.52□□□□□ -0.41
USH1C-202ENST00000318024 COX8AP10176 69 aa12.52□□□□□ -0.41
USH1C-202ENST00000318024 ORM2P19652 201 aa12.52□□□□□ -0.41
USH1C-202ENST00000318024 FAM71F2Q6NXP2 309 aa12.52□□□□□ -0.41
USH1C-202ENST00000318024 Q9H3A6 140 aa12.52□□□□□ -0.41
USH1C-202ENST00000318024 DOPEY2Q9Y3R5 2298 aa12.51□□□□□ -0.41
USH1C-202ENST00000318024 J3QKU1 62 aa12.51□□□□□ -0.41
USH1C-202ENST00000318024 Q86TA4 180 aa12.51□□□□□ -0.41
USH1C-202ENST00000318024 OR1B1Q8NGR6 318 aa12.51□□□□□ -0.41
USH1C-202ENST00000318024 HSPB8Q9UJY1 196 aa12.51□□□□□ -0.41
USH1C-202ENST00000318024 HELZ2Q9BYK8 2649 aaKnown RBP12.51□□□□□ -0.41
USH1C-202ENST00000318024 CBY3A6NI87 242 aa12.5□□□□□ -0.41
USH1C-202ENST00000318024 HTR1DP28221 377 aa12.5□□□□□ -0.41
USH1C-202ENST00000318024 OR11H6Q8NGC7 330 aa12.5□□□□□ -0.41
USH1C-202ENST00000318024 TPSG1Q9NRR2 321 aa12.5□□□□□ -0.41
USH1C-202ENST00000318024 RPH3ALQ9UNE2 315 aa12.5□□□□□ -0.41
USH1C-202ENST00000318024 RNF24Q9Y225 148 aa12.5□□□□□ -0.41
USH1C-202ENST00000318024 LY6LH3BQJ8 138 aa12.5□□□□□ -0.41
USH1C-202ENST00000318024 TOX4O94842 621 aa12.5□□□□□ -0.41
USH1C-202ENST00000318024 CNTFRP26992 372 aa12.5□□□□□ -0.41
USH1C-202ENST00000318024 GPR183P32249 361 aa12.5□□□□□ -0.41
USH1C-202ENST00000318024 TMEM116Q8NCL8 245 aa12.5□□□□□ -0.41
USH1C-202ENST00000318024 ZNF747Q9BV97 191 aa12.5□□□□□ -0.41
USH1C-202ENST00000318024 SIRPDQ9H106 197 aa12.5□□□□□ -0.41
USH1C-202ENST00000318024 TRBV6-1A0A0K0K1D8 114 aa12.49□□□□□ -0.41
USH1C-202ENST00000318024 CHEK1O14757 476 aa12.49□□□□□ -0.41
USH1C-202ENST00000318024 IGLC1P0CG04 106 aa12.49□□□□□ -0.41
USH1C-202ENST00000318024 FGF6P10767 208 aa12.49□□□□□ -0.41
USH1C-202ENST00000318024 CIARTQ8N365 385 aaPredicted RBP12.49□□□□□ -0.41
USH1C-202ENST00000318024 PIP4P2Q8N4L2 257 aa12.49□□□□□ -0.41
USH1C-202ENST00000318024 DPM3Q9P2X0 92 aa12.49□□□□□ -0.41
USH1C-202ENST00000318024 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.49□□□□□ -0.41
USH1C-202ENST00000318024 SLC25A17O43808 307 aa12.49□□□□□ -0.41
USH1C-202ENST00000318024 MC5RP33032 325 aa12.49□□□□□ -0.41
USH1C-202ENST00000318024 TRAV8-1A0A0A6YYK1 113 aa12.48□□□□□ -0.41
USH1C-202ENST00000318024 TIMM23O14925 209 aa12.48□□□□□ -0.41
USH1C-202ENST00000318024 NCR2O95944 276 aa12.48□□□□□ -0.41
USH1C-202ENST00000318024 C1orf122Q6ZSJ8 110 aa12.48□□□□□ -0.41
USH1C-202ENST00000318024 DAZAP1Q96EP5 407 aaKnown RBP12.48□□□□□ -0.41
USH1C-202ENST00000318024 PMCHL2Q9BQD1 86 aa12.48□□□□□ -0.41
USH1C-202ENST00000318024 ANKRD17O75179 2603 aaKnown RBP12.48□□□□□ -0.41
USH1C-202ENST00000318024 A0A096LNJ9 63 aa12.47□□□□□ -0.41
USH1C-202ENST00000318024 GAGE12BA1L429 117 aa12.47□□□□□ -0.41
USH1C-202ENST00000318024 ODF3BA8MYP8 253 aa12.47□□□□□ -0.41
USH1C-202ENST00000318024 H3BTX0 84 aa12.47□□□□□ -0.41
USH1C-202ENST00000318024 UFSP1Q6NVU6 142 aa12.47□□□□□ -0.41
USH1C-202ENST00000318024 DYNAPQ8N1N2 210 aa12.47□□□□□ -0.41
USH1C-202ENST00000318024 DPF1Q92782 380 aa12.47□□□□□ -0.41
USH1C-202ENST00000318024 OTORQ9NRC9 128 aa12.47□□□□□ -0.41
USH1C-202ENST00000318024 PEF1Q9UBV8 284 aaKnown RBP12.47□□□□□ -0.41
USH1C-202ENST00000318024 APCP25054 2843 aa12.47□□□□□ -0.41
USH1C-202ENST00000318024 TMEM14CQ9P0S9 112 aa12.46□□□□□ -0.41
USH1C-202ENST00000318024 ABCA2Q9BZC7 2435 aa12.46□□□□□ -0.42
USH1C-202ENST00000318024 IGHV3OR16-10A0A075B7F0 116 aa12.46□□□□□ -0.42
USH1C-202ENST00000318024 SEC11AP67812 179 aa12.46□□□□□ -0.42
USH1C-202ENST00000318024 TEX45Q8NA69 505 aa12.46□□□□□ -0.42
USH1C-202ENST00000318024 MAPK1IP1LQ8NDC0 245 aa12.46□□□□□ -0.42
USH1C-202ENST00000318024 AP5S1Q9NUS5 200 aa12.46□□□□□ -0.42
USH1C-202ENST00000318024 NAV2Q8IVL1 2488 aa12.45□□□□□ -0.42
USH1C-202ENST00000318024 A0A1B0GUT8 65 aa12.45□□□□□ -0.42
USH1C-202ENST00000318024 ARMS2P0C7Q2 107 aa12.45□□□□□ -0.42
USH1C-202ENST00000318024 VPS25Q9BRG1 176 aa12.45□□□□□ -0.42
USH1C-202ENST00000318024 CSTL1Q9H114 145 aa12.45□□□□□ -0.42
USH1C-202ENST00000318024 C7orf71A4D174 169 aa12.45□□□□□ -0.42
USH1C-202ENST00000318024 CRYGBP07316 175 aa12.45□□□□□ -0.42
USH1C-202ENST00000318024 TMEM97Q5BJF2 176 aa12.45□□□□□ -0.42
USH1C-202ENST00000318024 CSN3P07498 182 aa12.44□□□□□ -0.42
USH1C-202ENST00000318024 CEACAM3P40198 252 aa12.44□□□□□ -0.42
USH1C-202ENST00000318024 LGALS7P47929 136 aa12.44□□□□□ -0.42
USH1C-202ENST00000318024 VMA21Q3ZAQ7 101 aa12.44□□□□□ -0.42
USH1C-202ENST00000318024 ZC2HC1AQ96GY0 325 aa12.44□□□□□ -0.42
USH1C-202ENST00000318024 APELAP0DMC3 54 aa12.43□□□□□ -0.42
USH1C-202ENST00000318024 HES1Q14469 280 aa12.43□□□□□ -0.42
USH1C-202ENST00000318024 EXOC3-AS1Q8N2X6 119 aa12.43□□□□□ -0.42
USH1C-202ENST00000318024 TMEM238C9JI98 176 aa12.43□□□□□ -0.42
USH1C-202ENST00000318024 H0Y8G0 127 aa12.43□□□□□ -0.42
USH1C-202ENST00000318024 GOLT1AQ6ZVE7 132 aa12.43□□□□□ -0.42
USH1C-202ENST00000318024 PRNTQ86SH4 94 aa12.43□□□□□ -0.42
USH1C-202ENST00000318024 BPIFA4PQ86YQ2 179 aa12.43□□□□□ -0.42
USH1C-202ENST00000318024 CFHR4Q92496 578 aa12.43□□□□□ -0.42
USH1C-202ENST00000318024 FBXL15Q9H469 300 aa12.43□□□□□ -0.42
USH1C-202ENST00000318024 ZNF469Q96JG9 3925 aaPredicted RBP12.43□□□□□ -0.42
USH1C-202ENST00000318024 FAM106CPP0CH98 169 aa12.42□□□□□ -0.42
USH1C-202ENST00000318024 CRIP1P50238 77 aa12.42□□□□□ -0.42
USH1C-202ENST00000318024 UBE2E1P51965 193 aa12.42□□□□□ -0.42
USH1C-202ENST00000318024 RIGQ13278 110 aa12.42□□□□□ -0.42
USH1C-202ENST00000318024 FAM106AQ4KMX7 169 aa12.42□□□□□ -0.42
USH1C-202ENST00000318024 ZNF493Q6ZR52 646 aa12.42□□□□□ -0.42
USH1C-202ENST00000318024 OR10AG1Q8NH19 301 aa12.42□□□□□ -0.42
USH1C-202ENST00000318024 PSMG3-AS1Q96PY0 264 aa12.42□□□□□ -0.42
USH1C-202ENST00000318024 JMJD8Q96S16 334 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms