RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 MEOX2P50222 304 aa11.5□□□□□ -0.57
PDLIM5-202ENST00000318007 INSL3P51460 131 aa11.5□□□□□ -0.57
PDLIM5-202ENST00000318007 SNRPD3P62318 126 aaKnown RBP11.5□□□□□ -0.57
PDLIM5-202ENST00000318007 PSG9Q00887 426 aa11.5□□□□□ -0.57
PDLIM5-202ENST00000318007 MEF2BQ02080 365 aaPredicted RBP11.5□□□□□ -0.57
PDLIM5-202ENST00000318007 PRR25Q96S07 402 aa11.5□□□□□ -0.57
PDLIM5-202ENST00000318007 SLC50A1Q9BRV3 221 aa11.5□□□□□ -0.57
PDLIM5-202ENST00000318007 NBEAL1Q6ZS30 2694 aa11.49□□□□□ -0.57
PDLIM5-202ENST00000318007 TRAV8-1A0A0A6YYK1 113 aa11.49□□□□□ -0.57
PDLIM5-202ENST00000318007 A0A1W2PRE2 83 aa11.49□□□□□ -0.57
PDLIM5-202ENST00000318007 OR4C46A6NHA9 309 aa11.49□□□□□ -0.57
PDLIM5-202ENST00000318007 ISLRO14498 428 aa11.49□□□□□ -0.57
PDLIM5-202ENST00000318007 CD5P06127 495 aa11.49□□□□□ -0.57
PDLIM5-202ENST00000318007 CD81P60033 236 aa11.49□□□□□ -0.57
PDLIM5-202ENST00000318007 TRAV34A0A0B4J273 112 aa11.48□□□□□ -0.57
PDLIM5-202ENST00000318007 C9JQL5 133 aa11.48□□□□□ -0.57
PDLIM5-202ENST00000318007 PRB2P02812 416 aaPredicted RBP11.48□□□□□ -0.57
PDLIM5-202ENST00000318007 ID1P41134 155 aa11.48□□□□□ -0.57
PDLIM5-202ENST00000318007 GOLT1AQ6ZVE7 132 aa11.48□□□□□ -0.57
PDLIM5-202ENST00000318007 RPUSD4Q96CM3 377 aaKnown RBP11.48□□□□□ -0.57
PDLIM5-202ENST00000318007 CITED4Q96RK1 184 aa11.48□□□□□ -0.57
PDLIM5-202ENST00000318007 DERL1Q9BUN8 251 aa11.48□□□□□ -0.57
PDLIM5-202ENST00000318007 MAP6D1Q9H9H5 199 aa11.48□□□□□ -0.57
PDLIM5-202ENST00000318007 TREM1Q9NP99 234 aa11.48□□□□□ -0.57
PDLIM5-202ENST00000318007 OTORQ9NRC9 128 aa11.48□□□□□ -0.57
PDLIM5-202ENST00000318007 VAX2Q9UIW0 290 aa11.48□□□□□ -0.57
PDLIM5-202ENST00000318007 KNCNA6PVL3 124 aa11.48□□□□□ -0.57
PDLIM5-202ENST00000318007 ERCC8Q13216 396 aa11.48□□□□□ -0.57
PDLIM5-202ENST00000318007 ODF3L2Q3SX64 289 aa11.48□□□□□ -0.57
PDLIM5-202ENST00000318007 TRAV25A0A0B4J276 109 aa11.47□□□□□ -0.57
PDLIM5-202ENST00000318007 PPT1P50897 306 aa11.47□□□□□ -0.57
PDLIM5-202ENST00000318007 KRTAP10-11P60412 298 aa11.47□□□□□ -0.57
PDLIM5-202ENST00000318007 PSG3Q16557 428 aa11.47□□□□□ -0.57
PDLIM5-202ENST00000318007 NDUFA5Q16718 116 aa11.47□□□□□ -0.57
PDLIM5-202ENST00000318007 ZNF674Q2M3X9 581 aa11.47□□□□□ -0.57
PDLIM5-202ENST00000318007 AGRNO00468 2067 aa11.47□□□□□ -0.57
PDLIM5-202ENST00000318007 CSN1S1P47710 185 aa11.47□□□□□ -0.57
PDLIM5-202ENST00000318007 HIST1H1AQ02539 215 aaPredicted RBP11.47□□□□□ -0.57
PDLIM5-202ENST00000318007 ACTL10Q5JWF8 245 aa11.47□□□□□ -0.57
PDLIM5-202ENST00000318007 Q8TAT8 98 aa11.47□□□□□ -0.57
PDLIM5-202ENST00000318007 J3KRW8 73 aa11.46□□□□□ -0.58
PDLIM5-202ENST00000318007 ZNF506Q5JVG8 444 aa11.46□□□□□ -0.58
PDLIM5-202ENST00000318007 GTSCR1Q86UQ5 136 aa11.46□□□□□ -0.58
PDLIM5-202ENST00000318007 CCDC28AQ8IWP9 274 aa11.46□□□□□ -0.58
PDLIM5-202ENST00000318007 CYB561D1Q8N8Q1 229 aa11.46□□□□□ -0.58
PDLIM5-202ENST00000318007 C5orf17Q8NAS9 161 aa11.46□□□□□ -0.58
PDLIM5-202ENST00000318007 VGLL1Q99990 258 aa11.46□□□□□ -0.58
PDLIM5-202ENST00000318007 EPDR1Q9UM22 224 aa11.46□□□□□ -0.58
PDLIM5-202ENST00000318007 OR11H12B2RN74 326 aa11.45□□□□□ -0.58
PDLIM5-202ENST00000318007 PEX7O00628 323 aa11.45□□□□□ -0.58
PDLIM5-202ENST00000318007 ZNF253O75346 499 aa11.45□□□□□ -0.58
PDLIM5-202ENST00000318007 TCRAP04437 139 aa11.45□□□□□ -0.58
PDLIM5-202ENST00000318007 KRTAP21-3Q3LHN1 58 aa11.45□□□□□ -0.58
PDLIM5-202ENST00000318007 LCE2DQ5TA82 110 aaPredicted RBP11.45□□□□□ -0.58
PDLIM5-202ENST00000318007 LYPD1Q8N2G4 141 aa11.45□□□□□ -0.58
PDLIM5-202ENST00000318007 DEFB125Q8N687 156 aa11.45□□□□□ -0.58
PDLIM5-202ENST00000318007 OR4B1Q8NGF8 309 aa11.45□□□□□ -0.58
PDLIM5-202ENST00000318007 MED9Q9NWA0 146 aa11.45□□□□□ -0.58
PDLIM5-202ENST00000318007 DIRC3C9JPN6 131 aa11.45□□□□□ -0.58
PDLIM5-202ENST00000318007 NHLRC2Q8NBF2 726 aa11.45□□□□□ -0.58
PDLIM5-202ENST00000318007 OR2K2Q8NGT1 345 aa11.45□□□□□ -0.58
PDLIM5-202ENST00000318007 BEAN1Q3B7T3 259 aa11.44□□□□□ -0.58
PDLIM5-202ENST00000318007 LINC00862A6NCI5 91 aa11.43□□□□□ -0.58
PDLIM5-202ENST00000318007 ATG101Q9BSB4 218 aa11.43□□□□□ -0.58
PDLIM5-202ENST00000318007 AURKAIP1Q9NWT8 199 aaPredicted RBP11.43□□□□□ -0.58
PDLIM5-202ENST00000318007 PGPEP1LA6NFU8 196 aa11.43□□□□□ -0.58
PDLIM5-202ENST00000318007 AKR1C3P42330 323 aa11.43□□□□□ -0.58
PDLIM5-202ENST00000318007 FXYD7P58549 80 aa11.43□□□□□ -0.58
PDLIM5-202ENST00000318007 PEA15Q15121 130 aa11.43□□□□□ -0.58
PDLIM5-202ENST00000318007 PRNTQ86SH4 94 aa11.43□□□□□ -0.58
PDLIM5-202ENST00000318007 NKX6-2Q9C056 277 aaPredicted RBP11.43□□□□□ -0.58
PDLIM5-202ENST00000318007 RAB19A4D1S5 217 aa11.42□□□□□ -0.58
PDLIM5-202ENST00000318007 PDE6DO43924 150 aa11.42□□□□□ -0.58
PDLIM5-202ENST00000318007 SRP19P09132 144 aaKnown RBP11.42□□□□□ -0.58
PDLIM5-202ENST00000318007 SFTA3P0C7M3 94 aa11.42□□□□□ -0.58
PDLIM5-202ENST00000318007 CNN1P51911 297 aaKnown RBP11.42□□□□□ -0.58
PDLIM5-202ENST00000318007 OR8A1Q8NGG7 326 aa11.42□□□□□ -0.58
PDLIM5-202ENST00000318007 ARL2-SNX15V9GYD0 113 aa11.42□□□□□ -0.58
PDLIM5-202ENST00000318007 RPL35P42766 123 aaKnown RBP11.41□□□□□ -0.58
PDLIM5-202ENST00000318007 UBE2G1P62253 170 aa11.41□□□□□ -0.58
PDLIM5-202ENST00000318007 SAMD5Q5TGI4 173 aa11.41□□□□□ -0.58
PDLIM5-202ENST00000318007 EBLN2Q6P2I7 272 aa11.41□□□□□ -0.58
PDLIM5-202ENST00000318007 OR10J6PQ8NGY7 276 aa11.41□□□□□ -0.58
PDLIM5-202ENST00000318007 GPR61Q9BZJ8 451 aa11.41□□□□□ -0.58
PDLIM5-202ENST00000318007 TRAV2A0A0B4J234 112 aa11.41□□□□□ -0.58
PDLIM5-202ENST00000318007 RPL35AP18077 110 aaKnown RBP11.41□□□□□ -0.58
PDLIM5-202ENST00000318007 PMS2P11Q13670 270 aa11.41□□□□□ -0.58
PDLIM5-202ENST00000318007 SAMD13Q5VXD3 122 aa11.41□□□□□ -0.58
PDLIM5-202ENST00000318007 PARLQ9H300 379 aa11.41□□□□□ -0.58
PDLIM5-202ENST00000318007 C19orf73Q9NVV2 129 aa11.41□□□□□ -0.58
PDLIM5-202ENST00000318007 A0A0J9YX75 114 aa11.4□□□□□ -0.58
PDLIM5-202ENST00000318007 F6UZH7 168 aa11.4□□□□□ -0.58
PDLIM5-202ENST00000318007 WIPF1O43516 503 aa11.4□□□□□ -0.58
PDLIM5-202ENST00000318007 C2CD4CQ8TF44 421 aa11.4□□□□□ -0.58
PDLIM5-202ENST00000318007 HIST1H2BAQ96A08 127 aa11.4□□□□□ -0.58
PDLIM5-202ENST00000318007 AGPAT4-IT1Q9H0P7 198 aa11.4□□□□□ -0.58
PDLIM5-202ENST00000318007 SAV1Q9H4B6 383 aaPredicted RBP11.4□□□□□ -0.58
PDLIM5-202ENST00000318007 PRELID1Q9Y255 219 aa11.4□□□□□ -0.58
PDLIM5-202ENST00000318007 M0R2Z0 102 aa11.39□□□□□ -0.59
PDLIM5-202ENST00000318007 TAGLN2P37802 199 aaKnown RBP11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms