RNA–Protein interactions for RNA: ENST00000316948.8

CACFD1-202, Transcript of calcium channel flower domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CACFD1, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACFD1-202ENST00000316948 TMEM189A5PLL7 270 aa12.86□□□□□ -0.35
CACFD1-202ENST00000316948 GNG7O60262 68 aa12.86□□□□□ -0.35
CACFD1-202ENST00000316948 SH3BGRL2Q9UJC5 107 aa12.86□□□□□ -0.35
CACFD1-202ENST00000316948 SIGLEC9Q9Y336 463 aa12.86□□□□□ -0.35
CACFD1-202ENST00000316948 S4R3C0 116 aa12.86□□□□□ -0.35
CACFD1-202ENST00000316948 MUC6Q6W4X9 2439 aa12.86□□□□□ -0.35
CACFD1-202ENST00000316948 CKS2P33552 79 aa12.86□□□□□ -0.35
CACFD1-202ENST00000316948 PVRIGQ6DKI7 326 aa12.86□□□□□ -0.35
CACFD1-202ENST00000316948 Q6ZS92 163 aa12.86□□□□□ -0.35
CACFD1-202ENST00000316948 OR5A1Q8NGJ0 315 aa12.86□□□□□ -0.35
CACFD1-202ENST00000316948 FBXL15Q9H469 300 aa12.86□□□□□ -0.35
CACFD1-202ENST00000316948 K7ERJ3 54 aa12.85□□□□□ -0.35
CACFD1-202ENST00000316948 NDUFS7O75251 213 aa12.85□□□□□ -0.35
CACFD1-202ENST00000316948 NPYP01303 97 aa12.85□□□□□ -0.35
CACFD1-202ENST00000316948 IGKV1-17P01599 117 aa12.85□□□□□ -0.35
CACFD1-202ENST00000316948 TMEM11P17152 192 aa12.85□□□□□ -0.35
CACFD1-202ENST00000316948 Q6AWC8 147 aa12.85□□□□□ -0.35
CACFD1-202ENST00000316948 ZNF493Q6ZR52 646 aa12.85□□□□□ -0.35
CACFD1-202ENST00000316948 SMIM13P0DJ93 91 aa12.85□□□□□ -0.35
CACFD1-202ENST00000316948 FCGR2BP31994 310 aaPredicted RBP12.85□□□□□ -0.35
CACFD1-202ENST00000316948 TEX22C9J3V5 150 aa12.84□□□□□ -0.35
CACFD1-202ENST00000316948 K7EMI3 77 aa12.84□□□□□ -0.35
CACFD1-202ENST00000316948 SIVA1O15304 175 aa12.84□□□□□ -0.35
CACFD1-202ENST00000316948 LOXP28300 417 aaPredicted RBP12.84□□□□□ -0.35
CACFD1-202ENST00000316948 CLEC2AQ6UVW9 174 aa12.84□□□□□ -0.35
CACFD1-202ENST00000316948 BCL6BQ8N143 479 aaPredicted RBP12.84□□□□□ -0.35
CACFD1-202ENST00000316948 LINC00311Q8N616 119 aa12.84□□□□□ -0.35
CACFD1-202ENST00000316948 TRBV6-1A0A0K0K1D8 114 aa12.84□□□□□ -0.35
CACFD1-202ENST00000316948 TEX48A0A1B0GUV7 120 aa12.84□□□□□ -0.35
CACFD1-202ENST00000316948 FXYD2P54710 66 aa12.84□□□□□ -0.35
CACFD1-202ENST00000316948 TWIST1Q15672 202 aa12.84□□□□□ -0.35
CACFD1-202ENST00000316948 IGFL3Q6UXB1 125 aa12.84□□□□□ -0.35
CACFD1-202ENST00000316948 PPP1R27Q86WC6 154 aa12.84□□□□□ -0.35
CACFD1-202ENST00000316948 SHANK2-AS3Q9BTD1 123 aa12.84□□□□□ -0.35
CACFD1-202ENST00000316948 IGKV2D-26A0A0A0MRZ7 120 aa12.83□□□□□ -0.36
CACFD1-202ENST00000316948 SH2D1AO60880 128 aa12.83□□□□□ -0.36
CACFD1-202ENST00000316948 IL4P05112 153 aa12.83□□□□□ -0.36
CACFD1-202ENST00000316948 PLGLAQ15195 96 aa12.83□□□□□ -0.36
CACFD1-202ENST00000316948 U3KQK5 164 aa12.83□□□□□ -0.36
CACFD1-202ENST00000316948 COL12A1Q99715 3063 aa12.83□□□□□ -0.36
CACFD1-202ENST00000316948 A0A0G2JNJ9 132 aa12.83□□□□□ -0.36
CACFD1-202ENST00000316948 C16orf97H3BN30 126 aa12.83□□□□□ -0.36
CACFD1-202ENST00000316948 I3L2K1 104 aa12.83□□□□□ -0.36
CACFD1-202ENST00000316948 IGHV1-8P0DP01 117 aa12.83□□□□□ -0.36
CACFD1-202ENST00000316948 SAMD13Q5VXD3 122 aa12.83□□□□□ -0.36
CACFD1-202ENST00000316948 PRSS33Q8NF86 280 aa12.83□□□□□ -0.36
CACFD1-202ENST00000316948 FAM57AQ8TBR7 257 aa12.83□□□□□ -0.36
CACFD1-202ENST00000316948 Q9UFV3 132 aa12.83□□□□□ -0.36
CACFD1-202ENST00000316948 RBPJQ06330 500 aa12.82□□□□□ -0.36
CACFD1-202ENST00000316948 PPIAL4CA0A0B4J2A2 164 aa12.82□□□□□ -0.36
CACFD1-202ENST00000316948 PPIAL4GP0DN37 164 aa12.82□□□□□ -0.36
CACFD1-202ENST00000316948 DLX6P56179 175 aa12.82□□□□□ -0.36
CACFD1-202ENST00000316948 GTSF1LQ9H1H1 148 aa12.82□□□□□ -0.36
CACFD1-202ENST00000316948 THBDP07204 575 aa12.81□□□□□ -0.36
CACFD1-202ENST00000316948 IGKV2-40A0A087WW87 121 aaPredicted RBP12.81□□□□□ -0.36
CACFD1-202ENST00000316948 H3BRN7 92 aa12.81□□□□□ -0.36
CACFD1-202ENST00000316948 ZNF207O43670 478 aaKnown RBP12.81□□□□□ -0.36
CACFD1-202ENST00000316948 CIDEAO60543 219 aa12.81□□□□□ -0.36
CACFD1-202ENST00000316948 CNIH1O95406 144 aa12.81□□□□□ -0.36
CACFD1-202ENST00000316948 IGKV2D-40P01614 121 aaPredicted RBP12.81□□□□□ -0.36
CACFD1-202ENST00000316948 CRYGBP07316 175 aa12.81□□□□□ -0.36
CACFD1-202ENST00000316948 PAX8Q06710 450 aa12.81□□□□□ -0.36
CACFD1-202ENST00000316948 TNFRSF13BO14836 293 aaPredicted RBP12.81□□□□□ -0.36
CACFD1-202ENST00000316948 TMEM155Q4W5P6 130 aa12.81□□□□□ -0.36
CACFD1-202ENST00000316948 GAS8-AS1O95177 125 aa12.8□□□□□ -0.36
CACFD1-202ENST00000316948 PRSS1P07477 247 aa12.8□□□□□ -0.36
CACFD1-202ENST00000316948 RNF125Q96EQ8 232 aa12.8□□□□□ -0.36
CACFD1-202ENST00000316948 AAMDCQ9H7C9 122 aa12.8□□□□□ -0.36
CACFD1-202ENST00000316948 MSRB1Q9NZV6 116 aa12.8□□□□□ -0.36
CACFD1-202ENST00000316948 WI2-2373I1.2A0A1W2PRP0 233 aa12.8□□□□□ -0.36
CACFD1-202ENST00000316948 KLF17Q5JT82 389 aaPredicted RBP12.8□□□□□ -0.36
CACFD1-202ENST00000316948 ZNF491Q8N8L2 437 aa12.8□□□□□ -0.36
CACFD1-202ENST00000316948 Q8TAT8 98 aa12.8□□□□□ -0.36
CACFD1-202ENST00000316948 NHP2Q9NX24 153 aaKnown RBP12.8□□□□□ -0.36
CACFD1-202ENST00000316948 SMAGPQ0VAQ4 97 aa12.79□□□□□ -0.36
CACFD1-202ENST00000316948 C8orf31Q8N9H6 132 aa12.79□□□□□ -0.36
CACFD1-202ENST00000316948 ABCA4P78363 2273 aa12.79□□□□□ -0.36
CACFD1-202ENST00000316948 IGHV1-3A0A0C4DH29 117 aa12.79□□□□□ -0.36
CACFD1-202ENST00000316948 NPIPB5A8MRT5 1133 aa12.79□□□□□ -0.36
CACFD1-202ENST00000316948 EGR2P11161 476 aaPredicted RBP12.79□□□□□ -0.36
CACFD1-202ENST00000316948 EVI2AP22794 236 aa12.79□□□□□ -0.36
CACFD1-202ENST00000316948 COX7A1P24310 79 aa12.79□□□□□ -0.36
CACFD1-202ENST00000316948 LEPP41159 167 aa12.79□□□□□ -0.36
CACFD1-202ENST00000316948 GTSCR1Q86UQ5 136 aa12.79□□□□□ -0.36
CACFD1-202ENST00000316948 CHAC1Q9BUX1 264 aa12.79□□□□□ -0.36
CACFD1-202ENST00000316948 CHTOPQ9Y3Y2 248 aaKnown RBP12.79□□□□□ -0.36
CACFD1-202ENST00000316948 SMIM17P0DL12 118 aa12.78□□□□□ -0.36
CACFD1-202ENST00000316948 AZU1P20160 251 aa12.78□□□□□ -0.36
CACFD1-202ENST00000316948 IGFL4Q6B9Z1 124 aa12.78□□□□□ -0.36
CACFD1-202ENST00000316948 LYPD1Q8N2G4 141 aa12.78□□□□□ -0.36
CACFD1-202ENST00000316948 RNASE6Q93091 150 aaKnown RBP12.78□□□□□ -0.36
CACFD1-202ENST00000316948 DYNLRB1Q9NP97 96 aa12.78□□□□□ -0.36
CACFD1-202ENST00000316948 ATRXP46100 2492 aa12.78□□□□□ -0.36
CACFD1-202ENST00000316948 K7EIM0 57 aa12.78□□□□□ -0.36
CACFD1-202ENST00000316948 IGFBPL1Q8WX77 278 aa12.77□□□□□ -0.37
CACFD1-202ENST00000316948 MRPS12O15235 138 aaKnown RBP12.76□□□□□ -0.37
CACFD1-202ENST00000316948 MAP1LC3AQ9H492 121 aa12.76□□□□□ -0.37
CACFD1-202ENST00000316948 LYNX1G3V0Z9 82 aa12.76□□□□□ -0.37
CACFD1-202ENST00000316948 LYNX1P0DP58 116 aa12.76□□□□□ -0.37
CACFD1-202ENST00000316948 ZNF80P51504 273 aaPredicted RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms