RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 TMEM213A2RRL7 107 aa11.05□□□□□ -0.64
SPAST-201ENST00000315285 SLAQ13239 276 aa11.05□□□□□ -0.64
SPAST-201ENST00000315285 RHPN1-AS1Q9BWJ2 59 aa11.05□□□□□ -0.64
SPAST-201ENST00000315285 YAE1D1Q9NRH1 226 aa11.05□□□□□ -0.64
SPAST-201ENST00000315285 IGHV3-64A0A075B6Q5 118 aa11.05□□□□□ -0.64
SPAST-201ENST00000315285 PRR20EP86478 221 aa11.05□□□□□ -0.64
SPAST-201ENST00000315285 PRR20CP86479 221 aa11.05□□□□□ -0.64
SPAST-201ENST00000315285 PRR20DP86480 221 aa11.05□□□□□ -0.64
SPAST-201ENST00000315285 PRR20BP86481 221 aa11.05□□□□□ -0.64
SPAST-201ENST00000315285 PRR20AP86496 221 aa11.05□□□□□ -0.64
SPAST-201ENST00000315285 Q6ZWC4 215 aa11.05□□□□□ -0.64
SPAST-201ENST00000315285 C11orf53Q8IXP5 236 aa11.05□□□□□ -0.64
SPAST-201ENST00000315285 TSPAN13O95857 204 aa11.05□□□□□ -0.64
SPAST-201ENST00000315285 DEFB104AQ8WTQ1 72 aa11.05□□□□□ -0.64
SPAST-201ENST00000315285 KRTAP27-1Q3LI81 207 aa11.04□□□□□ -0.64
SPAST-201ENST00000315285 C11orf44Q8N8P7 122 aa11.04□□□□□ -0.64
SPAST-201ENST00000315285 K7ENP7 123 aa11.04□□□□□ -0.64
SPAST-201ENST00000315285 ATP6V0E1O15342 81 aa11.04□□□□□ -0.64
SPAST-201ENST00000315285 ZNF876PQ49A33 203 aa11.04□□□□□ -0.64
SPAST-201ENST00000315285 TRBV7-9A0A0J9YWB2 115 aa11.04□□□□□ -0.64
SPAST-201ENST00000315285 SMIM27A0A1W2PRY6 76 aa11.04□□□□□ -0.64
SPAST-201ENST00000315285 DIAPH2-AS1Q14236 149 aa11.04□□□□□ -0.64
SPAST-201ENST00000315285 FAM110DQ8TAY7 271 aaPredicted RBP11.04□□□□□ -0.64
SPAST-201ENST00000315285 SNHG12Q9BXW3 62 aa11.04□□□□□ -0.64
SPAST-201ENST00000315285 MED13Q9UHV7 2174 aa11.03□□□□□ -0.64
SPAST-201ENST00000315285 TRAV8-2A0A0B4J237 113 aa11.03□□□□□ -0.64
SPAST-201ENST00000315285 VCYO14598 125 aa11.03□□□□□ -0.64
SPAST-201ENST00000315285 TNFRSF6BO95407 300 aa11.03□□□□□ -0.64
SPAST-201ENST00000315285 LURAP1LQ8IV03 231 aa11.03□□□□□ -0.64
SPAST-201ENST00000315285 C8orf49Q96NF6 230 aa11.03□□□□□ -0.64
SPAST-201ENST00000315285 UBE2E1P51965 193 aa11.03□□□□□ -0.64
SPAST-201ENST00000315285 UBE2V1Q13404 147 aa11.03□□□□□ -0.64
SPAST-201ENST00000315285 CSTL1Q9H114 145 aa11.03□□□□□ -0.64
SPAST-201ENST00000315285 IGHV4-39P01824 125 aa11.03□□□□□ -0.64
SPAST-201ENST00000315285 GAGE13Q4V321 117 aa11.03□□□□□ -0.64
SPAST-201ENST00000315285 KIF26AQ9ULI4 1882 aaPredicted RBP11.02□□□□□ -0.64
SPAST-201ENST00000315285 OVOL3O00110 214 aa11.02□□□□□ -0.64
SPAST-201ENST00000315285 FAM104BQ5XKR9 115 aa11.02□□□□□ -0.64
SPAST-201ENST00000315285 BDP1A6H8Y1 2624 aa11.02□□□□□ -0.65
SPAST-201ENST00000315285 ZFHX2Q9C0A1 2572 aaPredicted RBP11.02□□□□□ -0.65
SPAST-201ENST00000315285 TDGF1P13385 188 aa11.02□□□□□ -0.65
SPAST-201ENST00000315285 RCHY1Q96PM5 261 aa11.02□□□□□ -0.65
SPAST-201ENST00000315285 DAZ1Q9NQZ3 744 aaKnown RBP11.02□□□□□ -0.65
SPAST-201ENST00000315285 VWC2Q2TAL6 325 aa11.02□□□□□ -0.65
SPAST-201ENST00000315285 STPG4Q8N801 248 aa11.02□□□□□ -0.65
SPAST-201ENST00000315285 FXYD5Q96DB9 178 aa11.02□□□□□ -0.65
SPAST-201ENST00000315285 PRSS46E5RG02 174 aa11.02□□□□□ -0.65
SPAST-201ENST00000315285 RIPPLY3P57055 190 aa11.02□□□□□ -0.65
SPAST-201ENST00000315285 PLA2G2EQ9NZK7 142 aa11.02□□□□□ -0.65
SPAST-201ENST00000315285 TMEM14CQ9P0S9 112 aa11.02□□□□□ -0.65
SPAST-201ENST00000315285 MSRB2Q9Y3D2 182 aa11.02□□□□□ -0.65
SPAST-201ENST00000315285 ARFGEF3Q5TH69 2177 aa11.02□□□□□ -0.65
SPAST-201ENST00000315285 KIR3DS1Q14943 382 aa11.01□□□□□ -0.65
SPAST-201ENST00000315285 C10orf126Q8N4M7 172 aa11.01□□□□□ -0.65
SPAST-201ENST00000315285 THAP8Q8NA92 274 aa11.01□□□□□ -0.65
SPAST-201ENST00000315285 CD5LO43866 347 aa11.01□□□□□ -0.65
SPAST-201ENST00000315285 PAX2Q02962 417 aa11.01□□□□□ -0.65
SPAST-201ENST00000315285 LSM4Q9Y4Z0 139 aaKnown RBP11.01□□□□□ -0.65
SPAST-201ENST00000315285 IGHV3-73A0A0B4J1V6 119 aa11.01□□□□□ -0.65
SPAST-201ENST00000315285 TRGV4A0A0C4DH28 118 aa11.01□□□□□ -0.65
SPAST-201ENST00000315285 PIP4P2Q8N4L2 257 aa11.01□□□□□ -0.65
SPAST-201ENST00000315285 IGLC1P0CG04 106 aa11.01□□□□□ -0.65
SPAST-201ENST00000315285 A8MWV9 139 aa11□□□□□ -0.65
SPAST-201ENST00000315285 TMEM238C9JI98 176 aa11□□□□□ -0.65
SPAST-201ENST00000315285 H3BRN7 92 aa11□□□□□ -0.65
SPAST-201ENST00000315285 IGLC2P0DOY2 106 aa11□□□□□ -0.65
SPAST-201ENST00000315285 IGLC3P0DOY3 106 aa11□□□□□ -0.65
SPAST-201ENST00000315285 G3V318 75 aa11□□□□□ -0.65
SPAST-201ENST00000315285 IL17RELQ6ZVW7 336 aa11□□□□□ -0.65
SPAST-201ENST00000315285 ERG28Q9UKR5 140 aa11□□□□□ -0.65
SPAST-201ENST00000315285 A0A0U1RRA0 63 aa11□□□□□ -0.65
SPAST-201ENST00000315285 KAAG1Q9UBP8 84 aa11□□□□□ -0.65
SPAST-201ENST00000315285 HTN3P15516 51 aa11□□□□□ -0.65
SPAST-201ENST00000315285 RUSC1-AS1Q66K80 236 aa11□□□□□ -0.65
SPAST-201ENST00000315285 SPOCK3Q9BQ16 436 aa11□□□□□ -0.65
SPAST-201ENST00000315285 K7EN84 100 aa10.99□□□□□ -0.65
SPAST-201ENST00000315285 CFAP161Q6P656 301 aa10.99□□□□□ -0.65
SPAST-201ENST00000315285 PRR25Q96S07 402 aa10.99□□□□□ -0.65
SPAST-201ENST00000315285 COX11Q9Y6N1 276 aa10.99□□□□□ -0.65
SPAST-201ENST00000315285 A0A087WWL8 130 aa10.99□□□□□ -0.65
SPAST-201ENST00000315285 PLEKHB2Q96CS7 222 aa10.99□□□□□ -0.65
SPAST-201ENST00000315285 RBMY1BA6NDE4 496 aaKnown RBP10.99□□□□□ -0.65
SPAST-201ENST00000315285 RBMY1EA6NEQ0 496 aaKnown RBP10.99□□□□□ -0.65
SPAST-201ENST00000315285 RBMY1DP0C7P1 496 aaKnown RBP10.99□□□□□ -0.65
SPAST-201ENST00000315285 RBMY1A1P0DJD3 496 aaKnown RBP10.99□□□□□ -0.65
SPAST-201ENST00000315285 RBMY1CP0DJD4 496 aa10.99□□□□□ -0.65
SPAST-201ENST00000315285 ASPHD1Q5U4P2 390 aa10.99□□□□□ -0.65
SPAST-201ENST00000315285 CHAC1Q9BUX1 264 aa10.99□□□□□ -0.65
SPAST-201ENST00000315285 NCOA6Q14686 2063 aaPredicted RBP10.98□□□□□ -0.65
SPAST-201ENST00000315285 ZNF415Q09FC8 603 aa10.98□□□□□ -0.65
SPAST-201ENST00000315285 SIGMAR1Q99720 223 aa10.98□□□□□ -0.65
SPAST-201ENST00000315285 SRCAPQ6ZRS2 3230 aa10.98□□□□□ -0.65
SPAST-201ENST00000315285 IGHV1-24A0A0C4DH33 117 aa10.98□□□□□ -0.65
SPAST-201ENST00000315285 SSBP2P81877 361 aaPredicted RBP10.98□□□□□ -0.65
SPAST-201ENST00000315285 TEX43Q6ZNM6 134 aa10.98□□□□□ -0.65
SPAST-201ENST00000315285 FREM1Q5H8C1 2179 aa10.98□□□□□ -0.65
SPAST-201ENST00000315285 PIP4P1Q86T03 277 aa10.97□□□□□ -0.65
SPAST-201ENST00000315285 CHCHD5Q9BSY4 110 aa10.97□□□□□ -0.65
SPAST-201ENST00000315285 ADARB2-AS1A8MUL3 147 aa10.97□□□□□ -0.65
SPAST-201ENST00000315285 UNQ6494/PRO21346Q6UXR6 183 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms