RNA–Protein interactions for RNA: ENST00000314759.5

SKA3-202, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SKA3, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-202ENST00000314759 CHTOPQ9Y3Y2 248 aaKnown RBP10.57□□□□□ -0.72
SKA3-202ENST00000314759 U3KQK5 164 aa10.57□□□□□ -0.72
SKA3-202ENST00000314759 NMUP48645 174 aa10.56□□□□□ -0.72
SKA3-202ENST00000314759 HSD52Q0P140 79 aa10.56□□□□□ -0.72
SKA3-202ENST00000314759 DPF1Q92782 380 aa10.56□□□□□ -0.72
SKA3-202ENST00000314759 RPEQ96AT9 228 aa10.56□□□□□ -0.72
SKA3-202ENST00000314759 CNIH1O95406 144 aa10.56□□□□□ -0.72
SKA3-202ENST00000314759 FAM104BQ5XKR9 115 aa10.56□□□□□ -0.72
SKA3-202ENST00000314759 PRELID3AQ96N28 172 aa10.56□□□□□ -0.72
SKA3-202ENST00000314759 ZNF318Q5VUA4 2279 aa10.56□□□□□ -0.72
SKA3-202ENST00000314759 CT45A10P0DMU9 189 aa10.55□□□□□ -0.72
SKA3-202ENST00000314759 TMEM190Q8WZ59 177 aa10.55□□□□□ -0.72
SKA3-202ENST00000314759 S4R3C0 116 aa10.55□□□□□ -0.72
SKA3-202ENST00000314759 E7EQL1 145 aa10.55□□□□□ -0.72
SKA3-202ENST00000314759 GNG7O60262 68 aa10.55□□□□□ -0.72
SKA3-202ENST00000314759 CIDEAO60543 219 aa10.55□□□□□ -0.72
SKA3-202ENST00000314759 LGALS9BQ3B8N2 356 aa10.55□□□□□ -0.72
SKA3-202ENST00000314759 LGALS9CQ6DKI2 356 aa10.55□□□□□ -0.72
SKA3-202ENST00000314759 SH3BGRL2Q9UJC5 107 aa10.55□□□□□ -0.72
SKA3-202ENST00000314759 GVINP1Q7Z2Y8 2422 aa10.55□□□□□ -0.72
SKA3-202ENST00000314759 KLF17Q5JT82 389 aaPredicted RBP10.54□□□□□ -0.72
SKA3-202ENST00000314759 ORMDL3Q8N138 153 aa10.54□□□□□ -0.72
SKA3-202ENST00000314759 TMEM189A5PLL7 270 aa10.54□□□□□ -0.72
SKA3-202ENST00000314759 VSTM5A8MXK1 200 aa10.54□□□□□ -0.72
SKA3-202ENST00000314759 SHISA9B4DS77 424 aa10.54□□□□□ -0.72
SKA3-202ENST00000314759 LYNX1G3V0Z9 82 aa10.54□□□□□ -0.72
SKA3-202ENST00000314759 LYNX1P0DP58 116 aa10.54□□□□□ -0.72
SKA3-202ENST00000314759 PAX8Q06710 450 aa10.54□□□□□ -0.72
SKA3-202ENST00000314759 TTTY13Q9BZ97 58 aa10.54□□□□□ -0.72
SKA3-202ENST00000314759 DKK2Q9UBU2 259 aa10.54□□□□□ -0.72
SKA3-202ENST00000314759 POLEQ07864 2286 aa10.54□□□□□ -0.72
SKA3-202ENST00000314759 WI2-2373I1.2A0A1W2PRP0 233 aa10.54□□□□□ -0.72
SKA3-202ENST00000314759 SH2D1AO60880 128 aa10.54□□□□□ -0.72
SKA3-202ENST00000314759 PPIAL4GP0DN37 164 aa10.54□□□□□ -0.72
SKA3-202ENST00000314759 RPL24P83731 157 aaKnown RBP10.54□□□□□ -0.72
SKA3-202ENST00000314759 MRPL51Q4U2R6 128 aaKnown RBP10.54□□□□□ -0.72
SKA3-202ENST00000314759 IGF2-ASQ6U949 168 aa10.54□□□□□ -0.72
SKA3-202ENST00000314759 C18orf15Q96N68 181 aa10.54□□□□□ -0.72
SKA3-202ENST00000314759 TEX48A0A1B0GUV7 120 aa10.53□□□□□ -0.72
SKA3-202ENST00000314759 A0A1W2PRD5 423 aa10.53□□□□□ -0.72
SKA3-202ENST00000314759 A0A1W2PRF3 423 aa10.53□□□□□ -0.72
SKA3-202ENST00000314759 A0A1W2PRM7 423 aa10.53□□□□□ -0.72
SKA3-202ENST00000314759 SMKR1H3BMG3 65 aa10.53□□□□□ -0.72
SKA3-202ENST00000314759 LY6LH3BQJ8 138 aa10.53□□□□□ -0.72
SKA3-202ENST00000314759 SRSF8Q9BRL6 282 aaKnown RBP10.53□□□□□ -0.72
SKA3-202ENST00000314759 APC2O95996 2303 aa10.53□□□□□ -0.72
SKA3-202ENST00000314759 TTC28Q96AY4 2481 aa10.53□□□□□ -0.72
SKA3-202ENST00000314759 PRRG2O14669 202 aa10.53□□□□□ -0.72
SKA3-202ENST00000314759 OR9G4Q8NGQ1 327 aa10.53□□□□□ -0.72
SKA3-202ENST00000314759 RNF5Q99942 180 aa10.53□□□□□ -0.72
SKA3-202ENST00000314759 K7ERJ3 54 aa10.52□□□□□ -0.72
SKA3-202ENST00000314759 TIMM23O14925 209 aa10.52□□□□□ -0.72
SKA3-202ENST00000314759 ZNF207O43670 478 aaKnown RBP10.52□□□□□ -0.72
SKA3-202ENST00000314759 HBDP02042 147 aa10.52□□□□□ -0.72
SKA3-202ENST00000314759 SAMD5Q5TGI4 173 aa10.52□□□□□ -0.72
SKA3-202ENST00000314759 AAMDCQ9H7C9 122 aa10.52□□□□□ -0.72
SKA3-202ENST00000314759 ANKRD11Q6UB99 2663 aaPredicted RBP10.52□□□□□ -0.73
SKA3-202ENST00000314759 PPIAL4CA0A0B4J2A2 164 aa10.52□□□□□ -0.73
SKA3-202ENST00000314759 K7EMI3 77 aa10.52□□□□□ -0.73
SKA3-202ENST00000314759 PDE6HQ13956 83 aa10.52□□□□□ -0.73
SKA3-202ENST00000314759 SAMD13Q5VXD3 122 aa10.52□□□□□ -0.73
SKA3-202ENST00000314759 OR4X2Q8NGF9 303 aa10.52□□□□□ -0.73
SKA3-202ENST00000314759 IGFBPL1Q8WX77 278 aa10.52□□□□□ -0.73
SKA3-202ENST00000314759 SPOCK3Q9BQ16 436 aa10.52□□□□□ -0.73
SKA3-202ENST00000314759 IGKV2-40A0A087WW87 121 aaPredicted RBP10.51□□□□□ -0.73
SKA3-202ENST00000314759 IGKV2D-40P01614 121 aaPredicted RBP10.51□□□□□ -0.73
SKA3-202ENST00000314759 FABP2P12104 132 aa10.51□□□□□ -0.73
SKA3-202ENST00000314759 FXYD2P54710 66 aa10.51□□□□□ -0.73
SKA3-202ENST00000314759 OR5A1Q8NGJ0 315 aa10.51□□□□□ -0.73
SKA3-202ENST00000314759 GTSF1LQ9H1H1 148 aa10.51□□□□□ -0.73
SKA3-202ENST00000314759 ACACAQ13085 2346 aa10.51□□□□□ -0.73
SKA3-202ENST00000314759 IGKV2D-26A0A0A0MRZ7 120 aa10.51□□□□□ -0.73
SKA3-202ENST00000314759 FBLL1A6NHQ2 334 aaKnown RBP10.51□□□□□ -0.73
SKA3-202ENST00000314759 NPYP01303 97 aa10.51□□□□□ -0.73
SKA3-202ENST00000314759 EGR2P11161 476 aaPredicted RBP10.51□□□□□ -0.73
SKA3-202ENST00000314759 GFRALQ6UXV0 394 aa10.51□□□□□ -0.73
SKA3-202ENST00000314759 IFI27L1Q96BM0 104 aa10.51□□□□□ -0.73
SKA3-202ENST00000314759 PIEZO2Q9H5I5 2752 aa10.51□□□□□ -0.73
SKA3-202ENST00000314759 AKAP13Q12802 2813 aa10.51□□□□□ -0.73
SKA3-202ENST00000314759 SIVA1O15304 175 aa10.51□□□□□ -0.73
SKA3-202ENST00000314759 GCSHP23434 173 aa10.51□□□□□ -0.73
SKA3-202ENST00000314759 NDUFS7O75251 213 aa10.5□□□□□ -0.73
SKA3-202ENST00000314759 CKS2P33552 79 aa10.5□□□□□ -0.73
SKA3-202ENST00000314759 ZNF575Q86XF7 245 aa10.5□□□□□ -0.73
SKA3-202ENST00000314759 AZU1P20160 251 aa10.5□□□□□ -0.73
SKA3-202ENST00000314759 TWIST1Q15672 202 aa10.5□□□□□ -0.73
SKA3-202ENST00000314759 PRR25Q96S07 402 aa10.5□□□□□ -0.73
SKA3-202ENST00000314759 NBR2O15453 112 aa10.49□□□□□ -0.73
SKA3-202ENST00000314759 SMIM13P0DJ93 91 aa10.49□□□□□ -0.73
SKA3-202ENST00000314759 ZNF80P51504 273 aaPredicted RBP10.49□□□□□ -0.73
SKA3-202ENST00000314759 COX8CQ7Z4L0 72 aa10.49□□□□□ -0.73
SKA3-202ENST00000314759 COL25A1Q9BXS0 654 aaPredicted RBP10.49□□□□□ -0.73
SKA3-202ENST00000314759 NPIPB5A8MRT5 1133 aa10.49□□□□□ -0.73
SKA3-202ENST00000314759 F8W735 103 aaPredicted RBP10.49□□□□□ -0.73
SKA3-202ENST00000314759 Q8TAT8 98 aa10.49□□□□□ -0.73
SKA3-202ENST00000314759 FANCD2OSQ96PS1 177 aa10.49□□□□□ -0.73
SKA3-202ENST00000314759 RAB1BQ9H0U4 201 aa10.49□□□□□ -0.73
SKA3-202ENST00000314759 SMAGPQ0VAQ4 97 aa10.48□□□□□ -0.73
SKA3-202ENST00000314759 ONECUT1Q9UBC0 465 aa10.48□□□□□ -0.73
SKA3-202ENST00000314759 GAS8-AS1O95177 125 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms