RNA–Protein interactions for RNA: ENST00000311487.9

HMGA1-201, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 1,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-201ENST00000311487 SIGLEC8Q9NYZ4 499 aa13.65□□□□□ -0.22
HMGA1-201ENST00000311487 FUT9Q9Y231 359 aa13.65□□□□□ -0.22
HMGA1-201ENST00000311487 B4DEV8 164 aa13.64□□□□□ -0.23
HMGA1-201ENST00000311487 MT-ND4LP03901 98 aa13.64□□□□□ -0.23
HMGA1-201ENST00000311487 ZNF674Q2M3X9 581 aa13.64□□□□□ -0.23
HMGA1-201ENST00000311487 MS4A6AQ9H2W1 248 aa13.64□□□□□ -0.23
HMGA1-201ENST00000311487 NAT8Q9UHE5 227 aa13.64□□□□□ -0.23
HMGA1-201ENST00000311487 ZNF785A8K8V0 405 aa13.64□□□□□ -0.23
HMGA1-201ENST00000311487 CST9LP1Q5W188 147 aa13.64□□□□□ -0.23
HMGA1-201ENST00000311487 FAM24BQ8N5W8 94 aa13.64□□□□□ -0.23
HMGA1-201ENST00000311487 TECRQ9NZ01 308 aaKnown RBP13.64□□□□□ -0.23
HMGA1-201ENST00000311487 PDE6DO43924 150 aa13.63□□□□□ -0.23
HMGA1-201ENST00000311487 PRR25Q96S07 402 aa13.63□□□□□ -0.23
HMGA1-201ENST00000311487 BIN3Q9NQY0 253 aa13.63□□□□□ -0.23
HMGA1-201ENST00000311487 INSL3P51460 131 aa13.62□□□□□ -0.23
HMGA1-201ENST00000311487 TMEM241Q24JQ0 296 aa13.62□□□□□ -0.23
HMGA1-201ENST00000311487 SAMD5Q5TGI4 173 aa13.62□□□□□ -0.23
HMGA1-201ENST00000311487 FAM167A-AS1Q96KT0 104 aa13.62□□□□□ -0.23
HMGA1-201ENST00000311487 TXNDC17Q9BRA2 123 aa13.62□□□□□ -0.23
HMGA1-201ENST00000311487 YTHDF2Q9Y5A9 579 aaKnown RBP13.62□□□□□ -0.23
HMGA1-201ENST00000311487 OR7C2O60412 319 aa13.62□□□□□ -0.23
HMGA1-201ENST00000311487 BLNKQ8WV28 456 aa13.62□□□□□ -0.23
HMGA1-201ENST00000311487 LINC00587B1AMM8 73 aa13.61□□□□□ -0.23
HMGA1-201ENST00000311487 F6UZH7 168 aa13.61□□□□□ -0.23
HMGA1-201ENST00000311487 BMI1P35226 326 aa13.61□□□□□ -0.23
HMGA1-201ENST00000311487 RNF212Q495C1 297 aa13.61□□□□□ -0.23
HMGA1-201ENST00000311487 ZNF503Q96F45 646 aa13.61□□□□□ -0.23
HMGA1-201ENST00000311487 CD7P09564 240 aa13.6□□□□□ -0.23
HMGA1-201ENST00000311487 RPL23P62829 140 aaKnown RBP13.6□□□□□ -0.23
HMGA1-201ENST00000311487 ADIRFQ15847 76 aa13.6□□□□□ -0.23
HMGA1-201ENST00000311487 C1orf194Q5T5A4 169 aa13.6□□□□□ -0.23
HMGA1-201ENST00000311487 LCN12Q6JVE5 192 aa13.6□□□□□ -0.23
HMGA1-201ENST00000311487 WFDC10AQ9H1F0 79 aa13.6□□□□□ -0.23
HMGA1-201ENST00000311487 CXorf65A6NEN9 183 aa13.6□□□□□ -0.23
HMGA1-201ENST00000311487 MRPS12O15235 138 aaKnown RBP13.6□□□□□ -0.23
HMGA1-201ENST00000311487 SMIM6P0DI80 62 aa13.6□□□□□ -0.23
HMGA1-201ENST00000311487 GP9P14770 177 aa13.6□□□□□ -0.23
HMGA1-201ENST00000311487 RAB5AP20339 215 aa13.6□□□□□ -0.23
HMGA1-201ENST00000311487 GALR1P47211 349 aa13.6□□□□□ -0.23
HMGA1-201ENST00000311487 DEFB1P60022 68 aa13.6□□□□□ -0.23
HMGA1-201ENST00000311487 ZNF124Q15973 351 aa13.6□□□□□ -0.23
HMGA1-201ENST00000311487 BPIFA4PQ86YQ2 179 aa13.6□□□□□ -0.23
HMGA1-201ENST00000311487 MRPL32Q9BYC8 188 aaKnown RBP13.6□□□□□ -0.23
HMGA1-201ENST00000311487 HELTA6NFD8 242 aa13.59□□□□□ -0.23
HMGA1-201ENST00000311487 SLC17A3O00476 420 aa13.59□□□□□ -0.23
HMGA1-201ENST00000311487 RPL7P18124 248 aaKnown RBP13.59□□□□□ -0.23
HMGA1-201ENST00000311487 RNF182Q8N6D2 247 aa13.59□□□□□ -0.23
HMGA1-201ENST00000311487 NRN1Q9NPD7 142 aa13.59□□□□□ -0.23
HMGA1-201ENST00000311487 TMEM242Q9NWH2 141 aa13.59□□□□□ -0.23
HMGA1-201ENST00000311487 ZNF586Q9NXT0 402 aa13.59□□□□□ -0.23
HMGA1-201ENST00000311487 ZNF256Q9Y2P7 627 aaPredicted RBP13.59□□□□□ -0.23
HMGA1-201ENST00000311487 HLA-DMBP28068 263 aa13.58□□□□□ -0.23
HMGA1-201ENST00000311487 TAS2R45P59539 299 aa13.58□□□□□ -0.23
HMGA1-201ENST00000311487 ELOBQ15370 118 aa13.58□□□□□ -0.23
HMGA1-201ENST00000311487 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.58□□□□□ -0.23
HMGA1-201ENST00000311487 PQLC2Q6ZP29 291 aa13.58□□□□□ -0.23
HMGA1-201ENST00000311487 DCANP1Q8TF63 244 aa13.58□□□□□ -0.23
HMGA1-201ENST00000311487 PAXXQ9BUH6 204 aa13.58□□□□□ -0.23
HMGA1-201ENST00000311487 DERL1Q9BUN8 251 aa13.58□□□□□ -0.23
HMGA1-201ENST00000311487 OR51M1Q9H341 326 aa13.58□□□□□ -0.23
HMGA1-201ENST00000311487 TMEM167BQ9NRX6 74 aa13.58□□□□□ -0.23
HMGA1-201ENST00000311487 SCO2A0A1W2PP80 73 aa13.58□□□□□ -0.24
HMGA1-201ENST00000311487 NDUFB4O95168 129 aa13.58□□□□□ -0.24
HMGA1-201ENST00000311487 ZNF688P0C7X2 276 aa13.58□□□□□ -0.24
HMGA1-201ENST00000311487 S100A7AQ86SG5 101 aa13.58□□□□□ -0.24
HMGA1-201ENST00000311487 ARL2-SNX15V9GYD0 113 aa13.58□□□□□ -0.24
HMGA1-201ENST00000311487 CTDSP1Q9GZU7 261 aa13.57□□□□□ -0.24
HMGA1-201ENST00000311487 URGCP-MRPS24S4R325 110 aa13.57□□□□□ -0.24
HMGA1-201ENST00000311487 WIPF1O43516 503 aa13.56□□□□□ -0.24
HMGA1-201ENST00000311487 IGLC2P0DOY2 106 aa13.56□□□□□ -0.24
HMGA1-201ENST00000311487 S100A7P31151 101 aa13.56□□□□□ -0.24
HMGA1-201ENST00000311487 UBE2L3P68036 154 aaKnown RBP13.56□□□□□ -0.24
HMGA1-201ENST00000311487 PAFAH1B2P68402 229 aa13.56□□□□□ -0.24
HMGA1-201ENST00000311487 APRG1Q8IVJ8 170 aa13.56□□□□□ -0.24
HMGA1-201ENST00000311487 ZFP82Q8N141 532 aa13.56□□□□□ -0.24
HMGA1-201ENST00000311487 FXYD5Q96DB9 178 aa13.56□□□□□ -0.24
HMGA1-201ENST00000311487 C16orf92Q96LL3 132 aa13.56□□□□□ -0.24
HMGA1-201ENST00000311487 CXCL1P09341 107 aa13.56□□□□□ -0.24
HMGA1-201ENST00000311487 BEAN1Q3B7T3 259 aa13.56□□□□□ -0.24
HMGA1-201ENST00000311487 SPAG8Q99932 426 aaPredicted RBP13.56□□□□□ -0.24
HMGA1-201ENST00000311487 C1orf196B1AJZ1 125 aa13.55□□□□□ -0.24
HMGA1-201ENST00000311487 S100A8P05109 93 aa13.55□□□□□ -0.24
HMGA1-201ENST00000311487 RAB5BP61020 215 aa13.55□□□□□ -0.24
HMGA1-201ENST00000311487 EGFEM1PQ0D2K5 195 aa13.55□□□□□ -0.24
HMGA1-201ENST00000311487 PSMG4Q5JS54 123 aa13.55□□□□□ -0.24
HMGA1-201ENST00000311487 C2CD4CQ8TF44 421 aa13.55□□□□□ -0.24
HMGA1-201ENST00000311487 C11orf52Q96A22 123 aa13.55□□□□□ -0.24
HMGA1-201ENST00000311487 C20orf173Q96LM9 149 aa13.55□□□□□ -0.24
HMGA1-201ENST00000311487 GPR82Q96P67 336 aa13.55□□□□□ -0.24
HMGA1-201ENST00000311487 TRAV25A0A0B4J276 109 aa13.54□□□□□ -0.24
HMGA1-201ENST00000311487 K7EQG2 157 aa13.54□□□□□ -0.24
HMGA1-201ENST00000311487 EXOC3-AS1Q8N2X6 119 aa13.54□□□□□ -0.24
HMGA1-201ENST00000311487 OR2K2Q8NGT1 345 aa13.54□□□□□ -0.24
HMGA1-201ENST00000311487 GPR61Q9BZJ8 451 aa13.54□□□□□ -0.24
HMGA1-201ENST00000311487 TGIF2-C20orf24A0A0A6YYL0 155 aa13.54□□□□□ -0.24
HMGA1-201ENST00000311487 TRAV8-2A0A0B4J237 113 aa13.54□□□□□ -0.24
HMGA1-201ENST00000311487 ZNF705FA8MVS1 300 aaPredicted RBP13.54□□□□□ -0.24
HMGA1-201ENST00000311487 NBEAP1P0C6P0 100 aa13.54□□□□□ -0.24
HMGA1-201ENST00000311487 RANP62826 216 aaKnown RBP13.54□□□□□ -0.24
HMGA1-201ENST00000311487 LINC01551Q86U37 167 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms