RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 FABP4P15090 132 aa16.32■□□□□ 0.2
ATG4D-201ENST00000309469 IGFL4Q6B9Z1 124 aa16.32■□□□□ 0.2
ATG4D-201ENST00000309469 TSKUQ8WUA8 353 aa16.32■□□□□ 0.2
ATG4D-201ENST00000309469 MRPL18Q9H0U6 180 aaKnown RBP16.32■□□□□ 0.2
ATG4D-201ENST00000309469 RPP21Q9H633 154 aaKnown RBP16.32■□□□□ 0.2
ATG4D-201ENST00000309469 CHEK1O14757 476 aa16.31■□□□□ 0.2
ATG4D-201ENST00000309469 P01737 135 aa16.31■□□□□ 0.2
ATG4D-201ENST00000309469 SLC35B1P78383 322 aa16.31■□□□□ 0.2
ATG4D-201ENST00000309469 FAM209BQ5JX69 171 aa16.31■□□□□ 0.2
ATG4D-201ENST00000309469 Q71RC1 249 aaPredicted RBP16.31■□□□□ 0.2
ATG4D-201ENST00000309469 OR10D4PQ8NGN7 298 aa16.31■□□□□ 0.2
ATG4D-201ENST00000309469 GNB1LQ9BYB4 327 aa16.31■□□□□ 0.2
ATG4D-201ENST00000309469 NPFFR1Q9GZQ6 430 aa16.31■□□□□ 0.2
ATG4D-201ENST00000309469 SNURFLB1AK76 121 aa16.31■□□□□ 0.2
ATG4D-201ENST00000309469 HLA-DMBP28068 263 aa16.31■□□□□ 0.2
ATG4D-201ENST00000309469 C16orf54Q6UWD8 224 aa16.31■□□□□ 0.2
ATG4D-201ENST00000309469 TEX29Q8N6K0 151 aa16.31■□□□□ 0.2
ATG4D-201ENST00000309469 ZNF702PQ9H963 129 aa16.31■□□□□ 0.2
ATG4D-201ENST00000309469 COX19Q49B96 90 aa16.3■□□□□ 0.2
ATG4D-201ENST00000309469 CT83Q5H943 113 aa16.3■□□□□ 0.2
ATG4D-201ENST00000309469 LCN12Q6JVE5 192 aa16.3■□□□□ 0.2
ATG4D-201ENST00000309469 WDR73Q6P4I2 378 aa16.3■□□□□ 0.2
ATG4D-201ENST00000309469 GBGT1Q8N5D6 347 aa16.3■□□□□ 0.2
ATG4D-201ENST00000309469 HIST1H2BLQ99880 126 aa16.3■□□□□ 0.2
ATG4D-201ENST00000309469 ASCL2Q99929 193 aa16.3■□□□□ 0.2
ATG4D-201ENST00000309469 SLC50A1Q9BRV3 221 aa16.3■□□□□ 0.2
ATG4D-201ENST00000309469 IGKV2-40A0A087WW87 121 aaPredicted RBP16.29■□□□□ 0.2
ATG4D-201ENST00000309469 IGKV2D-40P01614 121 aaPredicted RBP16.29■□□□□ 0.2
ATG4D-201ENST00000309469 C10orf99Q6UWK7 81 aa16.29■□□□□ 0.2
ATG4D-201ENST00000309469 IL17RELQ6ZVW7 336 aa16.29■□□□□ 0.2
ATG4D-201ENST00000309469 SIGLECL1Q8N7X8 197 aa16.29■□□□□ 0.2
ATG4D-201ENST00000309469 ZC2HC1AQ96GY0 325 aa16.29■□□□□ 0.2
ATG4D-201ENST00000309469 FOXC2Q99958 501 aa16.29■□□□□ 0.2
ATG4D-201ENST00000309469 PEF1Q9UBV8 284 aaKnown RBP16.29■□□□□ 0.2
ATG4D-201ENST00000309469 NAT8BQ9UHF3 227 aa16.29■□□□□ 0.2
ATG4D-201ENST00000309469 MT-ND6P03923 174 aa16.29■□□□□ 0.2
ATG4D-201ENST00000309469 NUP35Q8NFH5 326 aa16.29■□□□□ 0.2
ATG4D-201ENST00000309469 GLMPQ8WWB7 406 aa16.29■□□□□ 0.2
ATG4D-201ENST00000309469 NEU1Q99519 415 aa16.29■□□□□ 0.2
ATG4D-201ENST00000309469 GSN-AS1Q9NRJ2 163 aa16.29■□□□□ 0.2
ATG4D-201ENST00000309469 FBLL1A6NHQ2 334 aaKnown RBP16.28■□□□□ 0.2
ATG4D-201ENST00000309469 ZNF705FA8MVS1 300 aaPredicted RBP16.28■□□□□ 0.2
ATG4D-201ENST00000309469 NPIPB6E9PJ23 425 aa16.28■□□□□ 0.2
ATG4D-201ENST00000309469 MRPL54Q6P161 138 aaKnown RBP16.28■□□□□ 0.2
ATG4D-201ENST00000309469 A8MWL6 223 aa16.27■□□□□ 0.2
ATG4D-201ENST00000309469 PACRGQ96M98 296 aaPredicted RBP16.27■□□□□ 0.2
ATG4D-201ENST00000309469 NIT2Q9NQR4 276 aa16.27■□□□□ 0.2
ATG4D-201ENST00000309469 NBPF19A0A087WUL8 3843 aa16.27■□□□□ 0.19
ATG4D-201ENST00000309469 HIGD1CA8MV81 97 aa16.27■□□□□ 0.19
ATG4D-201ENST00000309469 OR4B1Q8NGF8 309 aa16.27■□□□□ 0.19
ATG4D-201ENST00000309469 CREBBPQ92793 2442 aa16.26■□□□□ 0.19
ATG4D-201ENST00000309469 PYY3Q5JQD4 70 aa16.26■□□□□ 0.19
ATG4D-201ENST00000309469 TMEM136Q6ZRR5 245 aa16.26■□□□□ 0.19
ATG4D-201ENST00000309469 C8orf86Q6ZUL3 223 aa16.26■□□□□ 0.19
ATG4D-201ENST00000309469 RNF182Q8N6D2 247 aa16.26■□□□□ 0.19
ATG4D-201ENST00000309469 TRAV8-2A0A0B4J237 113 aa16.25■□□□□ 0.19
ATG4D-201ENST00000309469 AMBPP02760 352 aa16.25■□□□□ 0.19
ATG4D-201ENST00000309469 CRIP1P50238 77 aa16.25■□□□□ 0.19
ATG4D-201ENST00000309469 SAPCD1Q5SSQ6 148 aa16.25■□□□□ 0.19
ATG4D-201ENST00000309469 C8orf49Q96NF6 230 aa16.25■□□□□ 0.19
ATG4D-201ENST00000309469 DUX5Q96PT3 197 aa16.25■□□□□ 0.19
ATG4D-201ENST00000309469 VGLL1Q99990 258 aa16.25■□□□□ 0.19
ATG4D-201ENST00000309469 TEX15Q9BXT5 2789 aa16.25■□□□□ 0.19
ATG4D-201ENST00000309469 HELZ2Q9BYK8 2649 aaKnown RBP16.25■□□□□ 0.19
ATG4D-201ENST00000309469 RAB4BP61018 213 aa16.25■□□□□ 0.19
ATG4D-201ENST00000309469 FOXE3Q13461 319 aa16.25■□□□□ 0.19
ATG4D-201ENST00000309469 TCF24Q7RTU0 167 aa16.25■□□□□ 0.19
ATG4D-201ENST00000309469 GFRA4Q9GZZ7 299 aa16.25■□□□□ 0.19
ATG4D-201ENST00000309469 PDZD2O15018 2839 aa16.24■□□□□ 0.19
ATG4D-201ENST00000309469 A0A1W2PS18 150 aa16.24■□□□□ 0.19
ATG4D-201ENST00000309469 PRAC2D3DTV9 90 aa16.24■□□□□ 0.19
ATG4D-201ENST00000309469 RPLP1P05386 114 aaKnown RBP16.24■□□□□ 0.19
ATG4D-201ENST00000309469 ELANEP08246 267 aa16.24■□□□□ 0.19
ATG4D-201ENST00000309469 RASL11AQ6T310 242 aa16.24■□□□□ 0.19
ATG4D-201ENST00000309469 OR2D3Q8NGH3 330 aa16.24■□□□□ 0.19
ATG4D-201ENST00000309469 GTSF1Q8WW33 167 aa16.24■□□□□ 0.19
ATG4D-201ENST00000309469 PRR25Q96S07 402 aa16.24■□□□□ 0.19
ATG4D-201ENST00000309469 GRIFINA4D1Z8 144 aa16.23■□□□□ 0.19
ATG4D-201ENST00000309469 HLA-DQA1P01909 254 aa16.23■□□□□ 0.19
ATG4D-201ENST00000309469 CT45A10P0DMU9 189 aa16.23■□□□□ 0.19
ATG4D-201ENST00000309469 COX8CQ7Z4L0 72 aa16.23■□□□□ 0.19
ATG4D-201ENST00000309469 WIPF2Q8TF74 440 aaPredicted RBP16.23■□□□□ 0.19
ATG4D-201ENST00000309469 FAM231BA6NCW3 169 aa16.23■□□□□ 0.19
ATG4D-201ENST00000309469 CRISP2P16562 243 aa16.23■□□□□ 0.19
ATG4D-201ENST00000309469 FAM106AQ4KMX7 169 aa16.23■□□□□ 0.19
ATG4D-201ENST00000309469 Q8N2B8 174 aa16.23■□□□□ 0.19
ATG4D-201ENST00000309469 TMEM86BQ8N661 226 aa16.23■□□□□ 0.19
ATG4D-201ENST00000309469 MRPL53Q96EL3 112 aaKnown RBP16.23■□□□□ 0.19
ATG4D-201ENST00000309469 IGHV7-4-1A0A0J9YVY3 117 aa16.22■□□□□ 0.19
ATG4D-201ENST00000309469 RBAKDNA6NC62 111 aa16.22■□□□□ 0.19
ATG4D-201ENST00000309469 TM4SF20Q53R12 229 aa16.22■□□□□ 0.19
ATG4D-201ENST00000309469 DNLZQ5SXM8 178 aa16.22■□□□□ 0.19
ATG4D-201ENST00000309469 GPHB5Q86YW7 130 aa16.22■□□□□ 0.19
ATG4D-201ENST00000309469 DAZ1Q9NQZ3 744 aaKnown RBP16.22■□□□□ 0.19
ATG4D-201ENST00000309469 ITPR3Q14573 2671 aa16.22■□□□□ 0.19
ATG4D-201ENST00000309469 A0A1B0GUS0 222 aa16.21■□□□□ 0.19
ATG4D-201ENST00000309469 K7EMT4 169 aa16.21■□□□□ 0.19
ATG4D-201ENST00000309469 KRTAP1-1Q07627 177 aa16.21■□□□□ 0.19
ATG4D-201ENST00000309469 Q8TAT8 98 aa16.21■□□□□ 0.19
ATG4D-201ENST00000309469 MYOZ3Q8TDC0 251 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms