RNA–Protein interactions for RNA: ENST00000309422.6

VEGFB-201, Transcript of vascular endothelial growth factor B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFB, Length 1,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-201ENST00000309422 RPL7L1Q6DKI1 246 aaKnown RBP14.43□□□□□ -0.1
VEGFB-201ENST00000309422 FAM167A-AS1Q96KT0 104 aa14.43□□□□□ -0.1
VEGFB-201ENST00000309422 IGF2BP2-AS1Q96M15 143 aa14.43□□□□□ -0.1
VEGFB-201ENST00000309422 KANTRA0A1W2PQU2 76 aa14.42□□□□□ -0.1
VEGFB-201ENST00000309422 SMIM9A6NGZ8 99 aa14.42□□□□□ -0.1
VEGFB-201ENST00000309422 SMLR1H3BR10 107 aa14.42□□□□□ -0.1
VEGFB-201ENST00000309422 HBE1P02100 147 aa14.42□□□□□ -0.1
VEGFB-201ENST00000309422 PMS2P11Q13670 270 aa14.42□□□□□ -0.1
VEGFB-201ENST00000309422 CASC10Q5T4H9 136 aa14.42□□□□□ -0.1
VEGFB-201ENST00000309422 ARPC5LQ9BPX5 153 aa14.42□□□□□ -0.1
VEGFB-201ENST00000309422 IGHV4-28A0A0C4DH34 117 aa14.41□□□□□ -0.1
VEGFB-201ENST00000309422 TMEM189A5PLL7 270 aa14.41□□□□□ -0.1
VEGFB-201ENST00000309422 ZNF705FA8MVS1 300 aaPredicted RBP14.41□□□□□ -0.1
VEGFB-201ENST00000309422 PFDN1O60925 122 aa14.41□□□□□ -0.1
VEGFB-201ENST00000309422 CDKN1BP46527 198 aa14.41□□□□□ -0.1
VEGFB-201ENST00000309422 ICAM4Q14773 271 aa14.41□□□□□ -0.1
VEGFB-201ENST00000309422 AKR1C8PQ5T2L2 129 aa14.41□□□□□ -0.1
VEGFB-201ENST00000309422 CSNK1G2-AS1Q8NCQ2 148 aa14.41□□□□□ -0.1
VEGFB-201ENST00000309422 C11orf45Q8TAV5 145 aa14.41□□□□□ -0.1
VEGFB-201ENST00000309422 FXYD5Q96DB9 178 aa14.41□□□□□ -0.1
VEGFB-201ENST00000309422 ACTR3CQ9C0K3 210 aaPredicted RBP14.41□□□□□ -0.1
VEGFB-201ENST00000309422 NBEAL2Q6ZNJ1 2754 aa14.41□□□□□ -0.1
VEGFB-201ENST00000309422 A0A0D9SG52 128 aa14.4□□□□□ -0.1
VEGFB-201ENST00000309422 NUPR2A6NF83 97 aa14.4□□□□□ -0.1
VEGFB-201ENST00000309422 HMSDA8MTL9 139 aa14.4□□□□□ -0.1
VEGFB-201ENST00000309422 A8MTW9 85 aa14.4□□□□□ -0.1
VEGFB-201ENST00000309422 M0R2Z0 102 aa14.4□□□□□ -0.1
VEGFB-201ENST00000309422 LEPP41159 167 aa14.4□□□□□ -0.1
VEGFB-201ENST00000309422 EIF5AP63241 154 aaKnown RBP14.4□□□□□ -0.1
VEGFB-201ENST00000309422 LYPD1Q8N2G4 141 aa14.4□□□□□ -0.1
VEGFB-201ENST00000309422 CMTM2Q8TAZ6 248 aa14.4□□□□□ -0.1
VEGFB-201ENST00000309422 RFNGQ9Y644 331 aa14.4□□□□□ -0.1
VEGFB-201ENST00000309422 RANP62826 216 aaKnown RBP14.39□□□□□ -0.11
VEGFB-201ENST00000309422 RRN3P1Q2M238 152 aa14.39□□□□□ -0.11
VEGFB-201ENST00000309422 TMEM78Q5T7P6 136 aa14.39□□□□□ -0.11
VEGFB-201ENST00000309422 ZNF705AQ6ZN79 300 aaPredicted RBP14.39□□□□□ -0.11
VEGFB-201ENST00000309422 IQCF2Q8IXL9 164 aa14.39□□□□□ -0.11
VEGFB-201ENST00000309422 TMEM256Q8N2U0 113 aa14.39□□□□□ -0.11
VEGFB-201ENST00000309422 EXOC3-AS1Q8N2X6 119 aa14.39□□□□□ -0.11
VEGFB-201ENST00000309422 Q8NAQ8 132 aa14.39□□□□□ -0.11
VEGFB-201ENST00000309422 NEU1Q99519 415 aa14.39□□□□□ -0.11
VEGFB-201ENST00000309422 TEX48A0A1B0GUV7 120 aa14.38□□□□□ -0.11
VEGFB-201ENST00000309422 G3V3Q6 166 aa14.38□□□□□ -0.11
VEGFB-201ENST00000309422 DEFB4AO15263 64 aa14.38□□□□□ -0.11
VEGFB-201ENST00000309422 AMTNQ6UX39 209 aa14.38□□□□□ -0.11
VEGFB-201ENST00000309422 RXFP4Q8TDU9 374 aa14.38□□□□□ -0.11
VEGFB-201ENST00000309422 PHYHIPLQ96FC7 376 aa14.38□□□□□ -0.11
VEGFB-201ENST00000309422 ODF3Q96PU9 254 aa14.38□□□□□ -0.11
VEGFB-201ENST00000309422 SH3BGRL3Q9H299 93 aa14.38□□□□□ -0.11
VEGFB-201ENST00000309422 X6R8D5 127 aa14.38□□□□□ -0.11
VEGFB-201ENST00000309422 TENM3Q9P273 2699 aa14.37□□□□□ -0.11
VEGFB-201ENST00000309422 M0R3E3 92 aa14.37□□□□□ -0.11
VEGFB-201ENST00000309422 NDUFB4O95168 129 aa14.37□□□□□ -0.11
VEGFB-201ENST00000309422 BAP18Q8IXM2 172 aa14.37□□□□□ -0.11
VEGFB-201ENST00000309422 KCNRGQ8N5I3 272 aa14.37□□□□□ -0.11
VEGFB-201ENST00000309422 Q9H3A6 140 aa14.37□□□□□ -0.11
VEGFB-201ENST00000309422 KLK5Q9Y337 293 aaPredicted RBP14.37□□□□□ -0.11
VEGFB-201ENST00000309422 LINC00477Q96M19 166 aa14.36□□□□□ -0.11
VEGFB-201ENST00000309422 C20orf144Q9BQM9 153 aa14.36□□□□□ -0.11
VEGFB-201ENST00000309422 ZNF471Q9BX82 626 aaPredicted RBP14.36□□□□□ -0.11
VEGFB-201ENST00000309422 TMEM167BQ9NRX6 74 aa14.36□□□□□ -0.11
VEGFB-201ENST00000309422 DNAH7Q8WXX0 4024 aa14.35□□□□□ -0.11
VEGFB-201ENST00000309422 TRAV12-2A0A075B6T6 113 aa14.35□□□□□ -0.11
VEGFB-201ENST00000309422 PRAC2D3DTV9 90 aa14.35□□□□□ -0.11
VEGFB-201ENST00000309422 NPIPB6E9PJ23 425 aa14.35□□□□□ -0.11
VEGFB-201ENST00000309422 HMGB3O15347 200 aaKnown RBP14.35□□□□□ -0.11
VEGFB-201ENST00000309422 BCL2L11O43521 198 aa14.35□□□□□ -0.11
VEGFB-201ENST00000309422 CXorf1O96002 111 aa14.35□□□□□ -0.11
VEGFB-201ENST00000309422 ARL14EPLP0DKL9 152 aa14.35□□□□□ -0.11
VEGFB-201ENST00000309422 EMP1P54849 157 aa14.35□□□□□ -0.11
VEGFB-201ENST00000309422 RPP25LQ8N5L8 163 aaKnown RBP14.35□□□□□ -0.11
VEGFB-201ENST00000309422 RAB24Q969Q5 203 aa14.35□□□□□ -0.11
VEGFB-201ENST00000309422 LINC01587Q99440 93 aa14.35□□□□□ -0.11
VEGFB-201ENST00000309422 OTORQ9NRC9 128 aa14.35□□□□□ -0.11
VEGFB-201ENST00000309422 LOC102723971A0A1B0GUV8 181 aa14.34□□□□□ -0.11
VEGFB-201ENST00000309422 STAG3L2P0CL84 134 aa14.34□□□□□ -0.11
VEGFB-201ENST00000309422 STAG3L3P0CL85 134 aa14.34□□□□□ -0.11
VEGFB-201ENST00000309422 PRB4P10163 310 aaPredicted RBP14.34□□□□□ -0.11
VEGFB-201ENST00000309422 Q6ZNX1 250 aa14.34□□□□□ -0.11
VEGFB-201ENST00000309422 AKAP14Q86UN6 197 aa14.34□□□□□ -0.11
VEGFB-201ENST00000309422 HYLS1Q96M11 299 aa14.34□□□□□ -0.11
VEGFB-201ENST00000309422 NIPSNAP3BQ9BS92 247 aa14.34□□□□□ -0.11
VEGFB-201ENST00000309422 hCG_2014768A0A024R1R8 64 aa14.34□□□□□ -0.11
VEGFB-201ENST00000309422 TCTE3Q8IZS6 198 aa14.34□□□□□ -0.11
VEGFB-201ENST00000309422 RPH3ALQ9UNE2 315 aa14.34□□□□□ -0.11
VEGFB-201ENST00000309422 AGRNO00468 2067 aa14.33□□□□□ -0.12
VEGFB-201ENST00000309422 IGKV2-40A0A087WW87 121 aaPredicted RBP14.33□□□□□ -0.12
VEGFB-201ENST00000309422 CTXND1A0A1B0GTU2 59 aa14.33□□□□□ -0.12
VEGFB-201ENST00000309422 H7BYZ3 331 aa14.33□□□□□ -0.12
VEGFB-201ENST00000309422 J3KRW8 73 aa14.33□□□□□ -0.12
VEGFB-201ENST00000309422 EIF3GO75821 320 aaKnown RBP eCLIP14.33□□□□□ -0.12
VEGFB-201ENST00000309422 IGKV2D-40P01614 121 aaPredicted RBP14.33□□□□□ -0.12
VEGFB-201ENST00000309422 SPART-AS1P0CW21 52 aa14.33□□□□□ -0.12
VEGFB-201ENST00000309422 RBMY1A1P0DJD3 496 aaKnown RBP14.33□□□□□ -0.12
VEGFB-201ENST00000309422 RBMY1CP0DJD4 496 aa14.33□□□□□ -0.12
VEGFB-201ENST00000309422 NANOS2P60321 138 aaKnown RBP14.33□□□□□ -0.12
VEGFB-201ENST00000309422 RBMY1FQ15415 496 aaKnown RBP14.33□□□□□ -0.12
VEGFB-201ENST00000309422 CCDC28AQ8IWP9 274 aa14.33□□□□□ -0.12
VEGFB-201ENST00000309422 STOML3Q8TAV4 291 aa14.33□□□□□ -0.12
VEGFB-201ENST00000309422 ZNF503Q96F45 646 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms