RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 BORCS7Q96B45 105 aa3.84□□□□□ -1.79
CKS1B-201ENST00000308987 GAFA1Q96PS6 74 aa3.84□□□□□ -1.79
CKS1B-201ENST00000308987 GFRA4Q9GZZ7 299 aa3.84□□□□□ -1.79
CKS1B-201ENST00000308987 ZNF430Q9H8G1 570 aaPredicted RBP3.84□□□□□ -1.79
CKS1B-201ENST00000308987 SAP30LQ9HAJ7 183 aa3.84□□□□□ -1.79
CKS1B-201ENST00000308987 ZNF492Q9P255 531 aa3.84□□□□□ -1.79
CKS1B-201ENST00000308987 CBY1Q9Y3M2 126 aa3.84□□□□□ -1.79
CKS1B-201ENST00000308987 RYR2Q92736 4967 aa3.83□□□□□ -1.8
CKS1B-201ENST00000308987 CSMD3Q7Z407 3707 aa3.83□□□□□ -1.8
CKS1B-201ENST00000308987 EPPK1P58107 5090 aaKnown RBP3.83□□□□□ -1.8
CKS1B-201ENST00000308987 IGHV3OR16-10A0A075B7F0 116 aa3.83□□□□□ -1.8
CKS1B-201ENST00000308987 IGHV1-69-2A0A0G2JMI3 117 aa3.83□□□□□ -1.8
CKS1B-201ENST00000308987 TRBV6-1A0A0K0K1D8 114 aa3.83□□□□□ -1.8
CKS1B-201ENST00000308987 A0A1B0GXF2 115 aa3.83□□□□□ -1.8
CKS1B-201ENST00000308987 TCRBV4S1A1TA0A5B7 111 aa3.83□□□□□ -1.8
CKS1B-201ENST00000308987 NKX6-3A6NJ46 265 aa3.83□□□□□ -1.8
CKS1B-201ENST00000308987 A8MWL6 223 aa3.83□□□□□ -1.8
CKS1B-201ENST00000308987 VSTM5A8MXK1 200 aa3.83□□□□□ -1.8
CKS1B-201ENST00000308987 J3QLI3 93 aa3.83□□□□□ -1.8
CKS1B-201ENST00000308987 PEX7O00628 323 aa3.83□□□□□ -1.8
CKS1B-201ENST00000308987 COX7A2P2O60397 106 aa3.83□□□□□ -1.8
CKS1B-201ENST00000308987 ACTL6BO94805 426 aa3.83□□□□□ -1.8
CKS1B-201ENST00000308987 IGHV1-46P01743 117 aa3.83□□□□□ -1.8
CKS1B-201ENST00000308987 TFF1P04155 84 aa3.83□□□□□ -1.8
CKS1B-201ENST00000308987 CRYGCP07315 174 aa3.83□□□□□ -1.8
CKS1B-201ENST00000308987 OR5AL1P0C617 328 aa3.83□□□□□ -1.8
CKS1B-201ENST00000308987 C3orf79P0CE67 100 aa3.83□□□□□ -1.8
CKS1B-201ENST00000308987 SAA1P0DJI8 122 aaPredicted RBP3.83□□□□□ -1.8
CKS1B-201ENST00000308987 SRIP30626 198 aa3.83□□□□□ -1.8
CKS1B-201ENST00000308987 MC5RP33032 325 aa3.83□□□□□ -1.8
CKS1B-201ENST00000308987 LGALS7P47929 136 aa3.83□□□□□ -1.8
CKS1B-201ENST00000308987 PLP1P60201 277 aa3.83□□□□□ -1.8
CKS1B-201ENST00000308987 KRTDAPP60985 99 aa3.83□□□□□ -1.8
CKS1B-201ENST00000308987 UBE2L3P68036 154 aaKnown RBP3.83□□□□□ -1.8
CKS1B-201ENST00000308987 TNFAIP6P98066 277 aaPredicted RBP3.83□□□□□ -1.8
CKS1B-201ENST00000308987 SPATA45Q537H7 98 aa3.83□□□□□ -1.8
CKS1B-201ENST00000308987 C10orf113Q5VZT2 155 aa3.83□□□□□ -1.8
CKS1B-201ENST00000308987 ZNF329Q86UD4 541 aa3.83□□□□□ -1.8
CKS1B-201ENST00000308987 PDPNQ86YL7 162 aa3.83□□□□□ -1.8
CKS1B-201ENST00000308987 NHLRC2Q8NBF2 726 aa3.83□□□□□ -1.8
CKS1B-201ENST00000308987 OR8B3Q8NGG8 313 aa3.83□□□□□ -1.8
CKS1B-201ENST00000308987 OR2D3Q8NGH3 330 aa3.83□□□□□ -1.8
CKS1B-201ENST00000308987 OR4C13Q8NGP0 309 aa3.83□□□□□ -1.8
CKS1B-201ENST00000308987 C18orf32Q8TCD1 76 aa3.83□□□□□ -1.8
CKS1B-201ENST00000308987 CHCHD1Q96BP2 118 aaKnown RBP3.83□□□□□ -1.8
CKS1B-201ENST00000308987 FLYWCH2Q96CP2 140 aaKnown RBP3.83□□□□□ -1.8
CKS1B-201ENST00000308987 OR8B2Q96RD0 313 aa3.83□□□□□ -1.8
CKS1B-201ENST00000308987 TRGV9Q99603 122 aa3.83□□□□□ -1.8
CKS1B-201ENST00000308987 ATG101Q9BSB4 218 aa3.83□□□□□ -1.8
CKS1B-201ENST00000308987 ALKBH7Q9BT30 221 aaPredicted RBP3.83□□□□□ -1.8
CKS1B-201ENST00000308987 PAXXQ9BUH6 204 aa3.83□□□□□ -1.8
CKS1B-201ENST00000308987 HINT2Q9BX68 163 aa3.83□□□□□ -1.8
CKS1B-201ENST00000308987 SLC25A2Q9BXI2 301 aa3.83□□□□□ -1.8
CKS1B-201ENST00000308987 RNASE7Q9H1E1 156 aaKnown RBP3.83□□□□□ -1.8
CKS1B-201ENST00000308987 RNF24Q9Y225 148 aa3.83□□□□□ -1.8
CKS1B-201ENST00000308987 LAMTOR2Q9Y2Q5 125 aa3.83□□□□□ -1.8
CKS1B-201ENST00000308987 PAM16Q9Y3D7 125 aa3.83□□□□□ -1.8
CKS1B-201ENST00000308987 PLECQ15149 4684 aaKnown RBP3.82□□□□□ -1.8
CKS1B-201ENST00000308987 PPIAL4EA0A075B759 164 aa3.82□□□□□ -1.8
CKS1B-201ENST00000308987 IGHV3OR15-7A0A075B7D8 119 aa3.82□□□□□ -1.8
CKS1B-201ENST00000308987 TRAV9-2A0A087WT02 112 aa3.82□□□□□ -1.8
CKS1B-201ENST00000308987 IGHV2-26A0A0B4J1V2 119 aa3.82□□□□□ -1.8
CKS1B-201ENST00000308987 PPIAL4CA0A0B4J2A2 164 aa3.82□□□□□ -1.8
CKS1B-201ENST00000308987 A0A1B0GW15 77 aa3.82□□□□□ -1.8
CKS1B-201ENST00000308987 SRRM4A7MD48 611 aaKnown RBP3.82□□□□□ -1.8
CKS1B-201ENST00000308987 F2Z2F3 143 aa3.82□□□□□ -1.8
CKS1B-201ENST00000308987 PPIAL4DF5H284 164 aa3.82□□□□□ -1.8
CKS1B-201ENST00000308987 H0YJW9 148 aa3.82□□□□□ -1.8
CKS1B-201ENST00000308987 CORTO00230 105 aa3.82□□□□□ -1.8
CKS1B-201ENST00000308987 CRXO43186 299 aaPredicted RBP3.82□□□□□ -1.8
CKS1B-201ENST00000308987 HYPMO75409 117 aa3.82□□□□□ -1.8
CKS1B-201ENST00000308987 HSBP1O75506 76 aa3.82□□□□□ -1.8
CKS1B-201ENST00000308987 FSTL3O95633 263 aa3.82□□□□□ -1.8
CKS1B-201ENST00000308987 TOMM40O96008 361 aa3.82□□□□□ -1.8
CKS1B-201ENST00000308987 NHLRC4P0CG21 123 aaPredicted RBP3.82□□□□□ -1.8
CKS1B-201ENST00000308987 PPIAL4FP0DN26 164 aa3.82□□□□□ -1.8
CKS1B-201ENST00000308987 MGST1P10620 155 aaKnown RBP3.82□□□□□ -1.8
CKS1B-201ENST00000308987 HNRNPA3P51991 378 aaKnown RBP3.82□□□□□ -1.8
CKS1B-201ENST00000308987 RPS20P60866 119 aaKnown RBP3.82□□□□□ -1.8
CKS1B-201ENST00000308987 PAX8Q06710 450 aa3.82□□□□□ -1.8
CKS1B-201ENST00000308987 SCGB2A2Q13296 93 aa3.82□□□□□ -1.8
CKS1B-201ENST00000308987 MMDQ15546 238 aa3.82□□□□□ -1.8
CKS1B-201ENST00000308987 TDRG1Q3Y452 100 aa3.82□□□□□ -1.8
CKS1B-201ENST00000308987 VMA21Q3ZAQ7 101 aa3.82□□□□□ -1.8
CKS1B-201ENST00000308987 KIR3DL3Q8N743 410 aa3.82□□□□□ -1.8
CKS1B-201ENST00000308987 TEX45Q8NA69 505 aa3.82□□□□□ -1.8
CKS1B-201ENST00000308987 C5orf17Q8NAS9 161 aa3.82□□□□□ -1.8
CKS1B-201ENST00000308987 OR9G1Q8NH87 305 aa3.82□□□□□ -1.8
CKS1B-201ENST00000308987 CCL17Q92583 94 aa3.82□□□□□ -1.8
CKS1B-201ENST00000308987 TNFRSF14Q92956 283 aa3.82□□□□□ -1.8
CKS1B-201ENST00000308987 FMC1Q96HJ9 113 aa3.82□□□□□ -1.8
CKS1B-201ENST00000308987 HARBI1Q96MB7 349 aa3.82□□□□□ -1.8
CKS1B-201ENST00000308987 GPR82Q96P67 336 aa3.82□□□□□ -1.8
CKS1B-201ENST00000308987 TXN2Q99757 166 aa3.82□□□□□ -1.8
CKS1B-201ENST00000308987 CITED1Q99966 193 aa3.82□□□□□ -1.8
CKS1B-201ENST00000308987 SRSF8Q9BRL6 282 aaKnown RBP3.82□□□□□ -1.8
CKS1B-201ENST00000308987 KRTAP4-4Q9BYR3 166 aa3.82□□□□□ -1.8
CKS1B-201ENST00000308987 PRSS22Q9GZN4 317 aa3.82□□□□□ -1.8
CKS1B-201ENST00000308987 ST20Q9HBF5 79 aa3.82□□□□□ -1.8
CKS1B-201ENST00000308987 ZNF355PQ9NSJ1 428 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms