RNA–Protein interactions for RNA: ENST00000308521.9

APOBEC3F-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3F, Length 2,694 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-201ENST00000308521 SUB1P53999 127 aaKnown RBP eCLIP8.2□□□□□ -1.1
APOBEC3F-201ENST00000308521 RPL24P83731 157 aaKnown RBP8.2□□□□□ -1.1
APOBEC3F-201ENST00000308521 OR4X2Q8NGF9 303 aa8.2□□□□□ -1.1
APOBEC3F-201ENST00000308521 ST6GALNAC6Q969X2 333 aa8.2□□□□□ -1.1
APOBEC3F-201ENST00000308521 MAP1LC3CQ9BXW4 147 aa8.2□□□□□ -1.1
APOBEC3F-201ENST00000308521 KAAG1Q9UBP8 84 aa8.2□□□□□ -1.1
APOBEC3F-201ENST00000308521 UBR5O95071 2799 aaPredicted RBP8.2□□□□□ -1.1
APOBEC3F-201ENST00000308521 PTPN13Q12923 2485 aa8.2□□□□□ -1.1
APOBEC3F-201ENST00000308521 LIPFP07098 398 aa8.2□□□□□ -1.1
APOBEC3F-201ENST00000308521 MEF2CQ06413 473 aaPredicted RBP8.2□□□□□ -1.1
APOBEC3F-201ENST00000308521 ASPHD1Q5U4P2 390 aa8.2□□□□□ -1.1
APOBEC3F-201ENST00000308521 PDPNQ86YL7 162 aa8.2□□□□□ -1.1
APOBEC3F-201ENST00000308521 TMEM167AQ8TBQ9 72 aa8.2□□□□□ -1.1
APOBEC3F-201ENST00000308521 NDFIP1Q9BT67 221 aa8.2□□□□□ -1.1
APOBEC3F-201ENST00000308521 HSPB8Q9UJY1 196 aa8.2□□□□□ -1.1
APOBEC3F-201ENST00000308521 IGHV1-24A0A0C4DH33 117 aa8.19□□□□□ -1.1
APOBEC3F-201ENST00000308521 hDV102S1A0JD36 115 aa8.19□□□□□ -1.1
APOBEC3F-201ENST00000308521 C19orf71A6NCJ1 209 aa8.19□□□□□ -1.1
APOBEC3F-201ENST00000308521 SLC25A5P05141 298 aaKnown RBP8.19□□□□□ -1.1
APOBEC3F-201ENST00000308521 NPIPB3Q92617 1050 aa8.19□□□□□ -1.1
APOBEC3F-201ENST00000308521 PERPQ96FX8 193 aa8.19□□□□□ -1.1
APOBEC3F-201ENST00000308521 FMC1Q96HJ9 113 aa8.19□□□□□ -1.1
APOBEC3F-201ENST00000308521 HARBI1Q96MB7 349 aa8.19□□□□□ -1.1
APOBEC3F-201ENST00000308521 SPANXA1Q9NS26 97 aa8.19□□□□□ -1.1
APOBEC3F-201ENST00000308521 FBN2P35556 2912 aa8.19□□□□□ -1.1
APOBEC3F-201ENST00000308521 USP9YO00507 2555 aaPredicted RBP8.19□□□□□ -1.1
APOBEC3F-201ENST00000308521 A1L4Q6 167 aa8.19□□□□□ -1.1
APOBEC3F-201ENST00000308521 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.19□□□□□ -1.1
APOBEC3F-201ENST00000308521 LEPROTL1O95214 131 aa8.19□□□□□ -1.1
APOBEC3F-201ENST00000308521 KIR3DS1Q14943 382 aa8.19□□□□□ -1.1
APOBEC3F-201ENST00000308521 DTX2Q86UW9 622 aa8.19□□□□□ -1.1
APOBEC3F-201ENST00000308521 OR5AN1Q8NGI8 311 aa8.19□□□□□ -1.1
APOBEC3F-201ENST00000308521 IGFBPL1Q8WX77 278 aa8.19□□□□□ -1.1
APOBEC3F-201ENST00000308521 J3KRW8 73 aa8.18□□□□□ -1.1
APOBEC3F-201ENST00000308521 MOSP00540 346 aa8.18□□□□□ -1.1
APOBEC3F-201ENST00000308521 LTAP01374 205 aa8.18□□□□□ -1.1
APOBEC3F-201ENST00000308521 GNG5P63218 68 aa8.18□□□□□ -1.1
APOBEC3F-201ENST00000308521 TMEM155Q4W5P6 130 aa8.18□□□□□ -1.1
APOBEC3F-201ENST00000308521 PSMG4Q5JS54 123 aa8.18□□□□□ -1.1
APOBEC3F-201ENST00000308521 LINC01545Q5VT33 79 aa8.18□□□□□ -1.1
APOBEC3F-201ENST00000308521 LINC00305Q7Z4B0 112 aa8.18□□□□□ -1.1
APOBEC3F-201ENST00000308521 OR10X1Q8NGY0 326 aa8.18□□□□□ -1.1
APOBEC3F-201ENST00000308521 BLNKQ8WV28 456 aa8.18□□□□□ -1.1
APOBEC3F-201ENST00000308521 MRPL20Q9BYC9 149 aaKnown RBP8.18□□□□□ -1.1
APOBEC3F-201ENST00000308521 PGPA6NDG6 321 aa8.18□□□□□ -1.1
APOBEC3F-201ENST00000308521 CGB1A6NKQ9 187 aa8.18□□□□□ -1.1
APOBEC3F-201ENST00000308521 DLX6P56179 175 aa8.18□□□□□ -1.1
APOBEC3F-201ENST00000308521 RBPMS2Q6ZRY4 209 aaKnown RBP8.18□□□□□ -1.1
APOBEC3F-201ENST00000308521 NRGNQ92686 78 aa8.18□□□□□ -1.1
APOBEC3F-201ENST00000308521 FLYWCH2Q96CP2 140 aaKnown RBP8.18□□□□□ -1.1
APOBEC3F-201ENST00000308521 E7EUB6 86 aa8.17□□□□□ -1.1
APOBEC3F-201ENST00000308521 P01737 135 aa8.17□□□□□ -1.1
APOBEC3F-201ENST00000308521 IGHV1-8P0DP01 117 aa8.17□□□□□ -1.1
APOBEC3F-201ENST00000308521 COX7A1P24310 79 aa8.17□□□□□ -1.1
APOBEC3F-201ENST00000308521 WT1-ASQ06250 92 aa8.17□□□□□ -1.1
APOBEC3F-201ENST00000308521 PVRIGQ6DKI7 326 aa8.17□□□□□ -1.1
APOBEC3F-201ENST00000308521 TTC9CQ8N5M4 171 aa8.17□□□□□ -1.1
APOBEC3F-201ENST00000308521 GTSF1Q8WW33 167 aa8.17□□□□□ -1.1
APOBEC3F-201ENST00000308521 TIMD4Q96H15 378 aa8.17□□□□□ -1.1
APOBEC3F-201ENST00000308521 ONECUT1Q9UBC0 465 aa8.17□□□□□ -1.1
APOBEC3F-201ENST00000308521 IGHV3-72A0A0B4J1Y9 119 aa8.17□□□□□ -1.1
APOBEC3F-201ENST00000308521 SH2D7A6NKC9 451 aaPredicted RBP8.17□□□□□ -1.1
APOBEC3F-201ENST00000308521 NPIPB6E9PJ23 425 aa8.17□□□□□ -1.1
APOBEC3F-201ENST00000308521 LINC00322Q6ZN03 302 aaPredicted RBP8.17□□□□□ -1.1
APOBEC3F-201ENST00000308521 NEU4Q8WWR8 484 aaPredicted RBP8.17□□□□□ -1.1
APOBEC3F-201ENST00000308521 SPANXB1Q9NS25 103 aaPredicted RBP8.17□□□□□ -1.1
APOBEC3F-201ENST00000308521 ERG28Q9UKR5 140 aa8.17□□□□□ -1.1
APOBEC3F-201ENST00000308521 A0A1W2PRD5 423 aa8.16□□□□□ -1.1
APOBEC3F-201ENST00000308521 A0A1W2PRF3 423 aa8.16□□□□□ -1.1
APOBEC3F-201ENST00000308521 A0A1W2PRM7 423 aa8.16□□□□□ -1.1
APOBEC3F-201ENST00000308521 SRSF1Q07955 248 aaKnown RBP eCLIP8.16□□□□□ -1.1
APOBEC3F-201ENST00000308521 LINC00173Q6ZV60 143 aa8.16□□□□□ -1.1
APOBEC3F-201ENST00000308521 OR4C13Q8NGP0 309 aa8.16□□□□□ -1.1
APOBEC3F-201ENST00000308521 TRGV9Q99603 122 aa8.16□□□□□ -1.1
APOBEC3F-201ENST00000308521 VGLL1Q99990 258 aa8.16□□□□□ -1.1
APOBEC3F-201ENST00000308521 CYSLTR1Q9Y271 337 aa8.16□□□□□ -1.1
APOBEC3F-201ENST00000308521 ABCA1O95477 2261 aa8.16□□□□□ -1.1
APOBEC3F-201ENST00000308521 TMEM190Q8WZ59 177 aa8.16□□□□□ -1.1
APOBEC3F-201ENST00000308521 DAZAP1Q96EP5 407 aaKnown RBP8.16□□□□□ -1.1
APOBEC3F-201ENST00000308521 PGLYRP4Q96LB8 373 aa8.16□□□□□ -1.1
APOBEC3F-201ENST00000308521 TENM4Q6N022 2769 aa8.16□□□□□ -1.1
APOBEC3F-201ENST00000308521 FOXA3P55318 350 aaPredicted RBP8.16□□□□□ -1.1
APOBEC3F-201ENST00000308521 GAGE5Q13069 117 aa8.16□□□□□ -1.1
APOBEC3F-201ENST00000308521 GAGE6Q13070 117 aa8.16□□□□□ -1.1
APOBEC3F-201ENST00000308521 SAMD5Q5TGI4 173 aa8.16□□□□□ -1.1
APOBEC3F-201ENST00000308521 ADAMTSL5Q6ZMM2 481 aa8.16□□□□□ -1.1
APOBEC3F-201ENST00000308521 BOD1L2Q8IYS8 172 aa8.16□□□□□ -1.1
APOBEC3F-201ENST00000308521 C8orf31Q8N9H6 132 aa8.16□□□□□ -1.1
APOBEC3F-201ENST00000308521 RAX2Q96IS3 184 aa8.16□□□□□ -1.1
APOBEC3F-201ENST00000308521 MRPL36Q9P0J6 103 aaKnown RBP8.16□□□□□ -1.1
APOBEC3F-201ENST00000308521 TRBV6-1A0A0K0K1D8 114 aa8.15□□□□□ -1.1
APOBEC3F-201ENST00000308521 IGLV2-23P01705 113 aa8.15□□□□□ -1.1
APOBEC3F-201ENST00000308521 TCRAP04437 139 aa8.15□□□□□ -1.1
APOBEC3F-201ENST00000308521 FGF6P10767 208 aa8.15□□□□□ -1.1
APOBEC3F-201ENST00000308521 LINC00311Q8N616 119 aa8.15□□□□□ -1.1
APOBEC3F-201ENST00000308521 TEX45Q8NA69 505 aa8.15□□□□□ -1.1
APOBEC3F-201ENST00000308521 GATD1Q8NB37 220 aa8.15□□□□□ -1.1
APOBEC3F-201ENST00000308521 RITA1Q96K30 269 aa8.15□□□□□ -1.1
APOBEC3F-201ENST00000308521 TMEM133Q9H2Q1 129 aa8.15□□□□□ -1.1
APOBEC3F-201ENST00000308521 DOPEY2Q9Y3R5 2298 aa8.15□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms