RNA–Protein interactions for RNA: ENST00000308271.13

USP48-201, Transcript of ubiquitin specific peptidase 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP48, Length 4,595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-201ENST00000308271 IGLV2-14P01704 120 aa15.51■□□□□ 0.07
USP48-201ENST00000308271 SCGB1A1P11684 91 aa15.51■□□□□ 0.07
USP48-201ENST00000308271 ZNF474Q6S9Z5 364 aaPredicted RBP15.51■□□□□ 0.07
USP48-201ENST00000308271 C11orf53Q8IXP5 236 aa15.51■□□□□ 0.07
USP48-201ENST00000308271 KIF26AQ9ULI4 1882 aaPredicted RBP15.51■□□□□ 0.07
USP48-201ENST00000308271 SUMO2P61956 95 aaKnown RBP15.5■□□□□ 0.07
USP48-201ENST00000308271 C15orf32Q32M92 178 aa15.5■□□□□ 0.07
USP48-201ENST00000308271 CRIP3Q6Q6R5 217 aa15.5■□□□□ 0.07
USP48-201ENST00000308271 DPH3P1Q9H4G8 78 aa15.5■□□□□ 0.07
USP48-201ENST00000308271 UCNP55089 124 aa15.5■□□□□ 0.07
USP48-201ENST00000308271 CD7P09564 240 aa15.5■□□□□ 0.07
USP48-201ENST00000308271 CLEC2AQ6UVW9 174 aa15.5■□□□□ 0.07
USP48-201ENST00000308271 OOSP1A8MZH6 123 aa15.49■□□□□ 0.07
USP48-201ENST00000308271 LINC00311Q8N616 119 aa15.49■□□□□ 0.07
USP48-201ENST00000308271 IGLV1-44P01699 117 aa15.49■□□□□ 0.07
USP48-201ENST00000308271 IGHV4-39P01824 125 aa15.49■□□□□ 0.07
USP48-201ENST00000308271 LYPD2Q6UXB3 125 aa15.49■□□□□ 0.07
USP48-201ENST00000308271 SPINK8P0C7L1 97 aa15.49■□□□□ 0.07
USP48-201ENST00000308271 ETDBQ3ZM63 59 aa15.49■□□□□ 0.07
USP48-201ENST00000308271 SIGLEC15Q6ZMC9 328 aa15.49■□□□□ 0.07
USP48-201ENST00000308271 TSSC4Q9Y5U2 329 aaPredicted RBP15.49■□□□□ 0.07
USP48-201ENST00000308271 TRAV16A0A0A6YYK6 109 aaPredicted RBP15.48■□□□□ 0.07
USP48-201ENST00000308271 RAX2Q96IS3 184 aa15.48■□□□□ 0.07
USP48-201ENST00000308271 TRAV8-4A0A0B4J246 113 aa15.48■□□□□ 0.07
USP48-201ENST00000308271 PSMB11A5LHX3 300 aa15.48■□□□□ 0.07
USP48-201ENST00000308271 UBE2L6O14933 153 aa15.48■□□□□ 0.07
USP48-201ENST00000308271 TMEM155Q4W5P6 130 aa15.48■□□□□ 0.07
USP48-201ENST00000308271 PRSS57Q6UWY2 283 aa15.48■□□□□ 0.07
USP48-201ENST00000308271 Q8N8P6 123 aa15.48■□□□□ 0.07
USP48-201ENST00000308271 ZC2HC1AQ96GY0 325 aa15.48■□□□□ 0.07
USP48-201ENST00000308271 C8orf49Q96NF6 230 aa15.48■□□□□ 0.07
USP48-201ENST00000308271 TMEM238C9JI98 176 aa15.47■□□□□ 0.07
USP48-201ENST00000308271 RNF182Q8N6D2 247 aa15.47■□□□□ 0.07
USP48-201ENST00000308271 PAX8Q06710 450 aa15.47■□□□□ 0.07
USP48-201ENST00000308271 DUX4L9Q6RFH8 374 aaPredicted RBP15.47■□□□□ 0.07
USP48-201ENST00000308271 GLMPQ8WWB7 406 aa15.47■□□□□ 0.07
USP48-201ENST00000308271 ABHD17AQ96GS6 310 aa15.47■□□□□ 0.07
USP48-201ENST00000308271 IGF2BP2-AS1Q96M15 143 aa15.47■□□□□ 0.07
USP48-201ENST00000308271 C9orf139Q6ZV77 190 aa15.47■□□□□ 0.07
USP48-201ENST00000308271 ARHGAP21Q5T5U3 1957 aa15.46■□□□□ 0.07
USP48-201ENST00000308271 C3orf36Q3SXR2 165 aa15.46■□□□□ 0.07
USP48-201ENST00000308271 IGFL4Q6B9Z1 124 aa15.46■□□□□ 0.07
USP48-201ENST00000308271 Q6ZPA2 131 aa15.46■□□□□ 0.07
USP48-201ENST00000308271 OBSL1O75147 1896 aa15.46■□□□□ 0.07
USP48-201ENST00000308271 ZNF672Q499Z4 452 aaPredicted RBP15.46■□□□□ 0.07
USP48-201ENST00000308271 YAE1D1Q9NRH1 226 aa15.46■□□□□ 0.07
USP48-201ENST00000308271 KLRB1Q12918 225 aa15.46■□□□□ 0.06
USP48-201ENST00000308271 ZNF295-AS1Q8N0V1 137 aa15.46■□□□□ 0.06
USP48-201ENST00000308271 CACNA1AO00555 2505 aa15.45■□□□□ 0.06
USP48-201ENST00000308271 PRR25Q96S07 402 aa15.45■□□□□ 0.06
USP48-201ENST00000308271 ABCA4P78363 2273 aa15.45■□□□□ 0.06
USP48-201ENST00000308271 K7EM74 188 aa15.45■□□□□ 0.06
USP48-201ENST00000308271 TAL2Q16559 108 aa15.45■□□□□ 0.06
USP48-201ENST00000308271 LINC00477Q96M19 166 aa15.45■□□□□ 0.06
USP48-201ENST00000308271 IGHV3OR16-10A0A075B7F0 116 aa15.44■□□□□ 0.06
USP48-201ENST00000308271 IGLC1P0CG04 106 aa15.44■□□□□ 0.06
USP48-201ENST00000308271 LINC01545Q5VT33 79 aa15.44■□□□□ 0.06
USP48-201ENST00000308271 H3BRN7 92 aa15.44■□□□□ 0.06
USP48-201ENST00000308271 NPYP01303 97 aa15.44■□□□□ 0.06
USP48-201ENST00000308271 TEX36Q5VZQ5 186 aa15.44■□□□□ 0.06
USP48-201ENST00000308271 IGHV3-11P01762 117 aa15.44■□□□□ 0.06
USP48-201ENST00000308271 PRTN3P24158 256 aa15.44■□□□□ 0.06
USP48-201ENST00000308271 MINOS1Q5TGZ0 78 aa15.44■□□□□ 0.06
USP48-201ENST00000308271 VGLL1Q99990 258 aa15.44■□□□□ 0.06
USP48-201ENST00000308271 MINOS1-NBL1R4GNA1 71 aa15.44■□□□□ 0.06
USP48-201ENST00000308271 VCYO14598 125 aa15.43■□□□□ 0.06
USP48-201ENST00000308271 FRMD6-AS1P0C7T7 363 aa15.43■□□□□ 0.06
USP48-201ENST00000308271 P0C879 139 aa15.43■□□□□ 0.06
USP48-201ENST00000308271 PLEKHB2Q96CS7 222 aa15.43■□□□□ 0.06
USP48-201ENST00000308271 IGLV3-9A0A075B6K5 115 aa15.43■□□□□ 0.06
USP48-201ENST00000308271 GAGE12HA6NDE8 117 aa15.43■□□□□ 0.06
USP48-201ENST00000308271 PIMREGQ9BSJ6 248 aa15.43■□□□□ 0.06
USP48-201ENST00000308271 NDUFS7O75251 213 aa15.43■□□□□ 0.06
USP48-201ENST00000308271 SSBP2P81877 361 aaPredicted RBP15.43■□□□□ 0.06
USP48-201ENST00000308271 SCRT2Q9NQ03 307 aa15.43■□□□□ 0.06
USP48-201ENST00000308271 C14orf178Q8N769 122 aaPredicted RBP15.42■□□□□ 0.06
USP48-201ENST00000308271 DUX5Q96PT3 197 aa15.42■□□□□ 0.06
USP48-201ENST00000308271 VMO1Q7Z5L0 202 aa15.42■□□□□ 0.06
USP48-201ENST00000308271 KMT2EQ8IZD2 1858 aa15.42■□□□□ 0.06
USP48-201ENST00000308271 LINC00173Q6ZV60 143 aa15.42■□□□□ 0.06
USP48-201ENST00000308271 CSTL1Q9H114 145 aa15.42■□□□□ 0.06
USP48-201ENST00000308271 TPSG1Q9NRR2 321 aa15.42■□□□□ 0.06
USP48-201ENST00000308271 TAX1BP3O14907 124 aa15.41■□□□□ 0.06
USP48-201ENST00000308271 CNTFRP26992 372 aa15.41■□□□□ 0.06
USP48-201ENST00000308271 NDUFB8O95169 186 aa15.41■□□□□ 0.06
USP48-201ENST00000308271 CEND1Q8N111 149 aa15.41■□□□□ 0.06
USP48-201ENST00000308271 CREBBPQ92793 2442 aa15.41■□□□□ 0.06
USP48-201ENST00000308271 TRBV20-1A0A075B6N2 111 aa15.41■□□□□ 0.06
USP48-201ENST00000308271 ERCC8Q13216 396 aa15.41■□□□□ 0.06
USP48-201ENST00000308271 M0R1W7 72 aa15.41■□□□□ 0.06
USP48-201ENST00000308271 FAM167A-AS1Q96KT0 104 aa15.41■□□□□ 0.06
USP48-201ENST00000308271 FREM1Q5H8C1 2179 aa15.4■□□□□ 0.06
USP48-201ENST00000308271 PCNX3Q9H6A9 2034 aa15.4■□□□□ 0.06
USP48-201ENST00000308271 CD28P10747 220 aa15.4■□□□□ 0.06
USP48-201ENST00000308271 FAM120AOSQ5T036 256 aa15.4■□□□□ 0.06
USP48-201ENST00000308271 NPFFR1Q9GZQ6 430 aa15.4■□□□□ 0.06
USP48-201ENST00000308271 MRPL35Q9NZE8 188 aaKnown RBP15.4■□□□□ 0.06
USP48-201ENST00000308271 KLRD1Q13241 179 aa15.39■□□□□ 0.06
USP48-201ENST00000308271 DKK2Q9UBU2 259 aa15.39■□□□□ 0.06
USP48-201ENST00000308271 PCNX1Q96RV3 2341 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms