RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 CHEK1O14757 476 aa5.28□□□□□ -1.56
PTCD2-201ENST00000308077 TCRAP04437 139 aa5.28□□□□□ -1.56
PTCD2-201ENST00000308077 HLA-DMBP28068 263 aa5.28□□□□□ -1.56
PTCD2-201ENST00000308077 GALR1P47211 349 aa5.28□□□□□ -1.56
PTCD2-201ENST00000308077 KRTAP10-3P60369 221 aa5.28□□□□□ -1.56
PTCD2-201ENST00000308077 KLF5Q13887 457 aaPredicted RBP5.28□□□□□ -1.56
PTCD2-201ENST00000308077 ADIRFQ15847 76 aa5.28□□□□□ -1.56
PTCD2-201ENST00000308077 LINC01551Q86U37 167 aa5.28□□□□□ -1.56
PTCD2-201ENST00000308077 HIST1H2BAQ96A08 127 aa5.28□□□□□ -1.56
PTCD2-201ENST00000308077 CITED2Q99967 270 aaPredicted RBP5.28□□□□□ -1.56
PTCD2-201ENST00000308077 TCEAL7Q9BRU2 100 aa5.28□□□□□ -1.56
PTCD2-201ENST00000308077 RHPN1-AS1Q9BWJ2 59 aa5.28□□□□□ -1.56
PTCD2-201ENST00000308077 ZNF331Q9NQX6 463 aaPredicted RBP5.28□□□□□ -1.56
PTCD2-201ENST00000308077 SMPXQ9UHP9 88 aa5.28□□□□□ -1.56
PTCD2-201ENST00000308077 UFC1Q9Y3C8 167 aa5.28□□□□□ -1.56
PTCD2-201ENST00000308077 TRAV8-2A0A0B4J237 113 aa5.28□□□□□ -1.56
PTCD2-201ENST00000308077 A0A1W2PRX2 142 aa5.28□□□□□ -1.56
PTCD2-201ENST00000308077 HELTA6NFD8 242 aa5.28□□□□□ -1.56
PTCD2-201ENST00000308077 ZNF785A8K8V0 405 aa5.28□□□□□ -1.56
PTCD2-201ENST00000308077 C9JCJ5 164 aa5.28□□□□□ -1.56
PTCD2-201ENST00000308077 K7EN84 100 aa5.28□□□□□ -1.56
PTCD2-201ENST00000308077 ISLRO14498 428 aa5.28□□□□□ -1.56
PTCD2-201ENST00000308077 ZNF253O75346 499 aa5.28□□□□□ -1.56
PTCD2-201ENST00000308077 IGLV2-8P01709 118 aa5.28□□□□□ -1.56
PTCD2-201ENST00000308077 PNRC1Q12796 327 aaPredicted RBP5.28□□□□□ -1.56
PTCD2-201ENST00000308077 RHEBQ15382 184 aa5.28□□□□□ -1.56
PTCD2-201ENST00000308077 CENPWQ5EE01 88 aa5.28□□□□□ -1.56
PTCD2-201ENST00000308077 C1QL4Q86Z23 238 aa5.28□□□□□ -1.56
PTCD2-201ENST00000308077 OR1N2Q8NGR9 330 aa5.28□□□□□ -1.56
PTCD2-201ENST00000308077 WFDC12Q8WWY7 111 aa5.28□□□□□ -1.56
PTCD2-201ENST00000308077 RAX2Q96IS3 184 aa5.28□□□□□ -1.56
PTCD2-201ENST00000308077 SGK494Q96LW2 274 aa5.28□□□□□ -1.56
PTCD2-201ENST00000308077 ATG101Q9BSB4 218 aa5.28□□□□□ -1.56
PTCD2-201ENST00000308077 TRAV8-1A0A0A6YYK1 113 aa5.27□□□□□ -1.57
PTCD2-201ENST00000308077 A0A1W2PS18 150 aa5.27□□□□□ -1.57
PTCD2-201ENST00000308077 ADARB2-AS1A8MUL3 147 aa5.27□□□□□ -1.57
PTCD2-201ENST00000308077 IGLV2-11P01706 119 aa5.27□□□□□ -1.57
PTCD2-201ENST00000308077 CNN1P51911 297 aaKnown RBP5.27□□□□□ -1.57
PTCD2-201ENST00000308077 PSG9Q00887 426 aa5.27□□□□□ -1.57
PTCD2-201ENST00000308077 ADAMTSL5Q6ZMM2 481 aa5.27□□□□□ -1.57
PTCD2-201ENST00000308077 GOLT1AQ6ZVE7 132 aa5.27□□□□□ -1.57
PTCD2-201ENST00000308077 RNF182Q8N6D2 247 aa5.27□□□□□ -1.57
PTCD2-201ENST00000308077 OCC1Q8TAD7 63 aa5.27□□□□□ -1.57
PTCD2-201ENST00000308077 GRAMD2BQ96HH9 432 aa5.27□□□□□ -1.57
PTCD2-201ENST00000308077 KLF12Q9Y4X4 402 aa5.27□□□□□ -1.57
PTCD2-201ENST00000308077 TSSC4Q9Y5U2 329 aaPredicted RBP5.27□□□□□ -1.57
PTCD2-201ENST00000308077 KIAA1109Q2LD37 5005 aa5.27□□□□□ -1.57
PTCD2-201ENST00000308077 LOC105371267A0A1B0GV96 52 aa5.26□□□□□ -1.57
PTCD2-201ENST00000308077 C2orf70A6NJV1 201 aa5.26□□□□□ -1.57
PTCD2-201ENST00000308077 ZNF705FA8MVS1 300 aaPredicted RBP5.26□□□□□ -1.57
PTCD2-201ENST00000308077 DIRC3C9JPN6 131 aa5.26□□□□□ -1.57
PTCD2-201ENST00000308077 SOCS3O14543 225 aa5.26□□□□□ -1.57
PTCD2-201ENST00000308077 GNG4P50150 75 aa5.26□□□□□ -1.57
PTCD2-201ENST00000308077 TAS2R60P59551 318 aa5.26□□□□□ -1.57
PTCD2-201ENST00000308077 FHL3Q13643 280 aa5.26□□□□□ -1.57
PTCD2-201ENST00000308077 TMEM183BQ1AE95 376 aa5.26□□□□□ -1.57
PTCD2-201ENST00000308077 NHLRC2Q8NBF2 726 aa5.26□□□□□ -1.57
PTCD2-201ENST00000308077 CMTM2Q8TAZ6 248 aa5.26□□□□□ -1.57
PTCD2-201ENST00000308077 DLX4Q92988 240 aaPredicted RBP5.26□□□□□ -1.57
PTCD2-201ENST00000308077 AAMDCQ9H7C9 122 aa5.26□□□□□ -1.57
PTCD2-201ENST00000308077 SMCO4Q9NRQ5 59 aa5.26□□□□□ -1.57
PTCD2-201ENST00000308077 B4DEV8 164 aa5.26□□□□□ -1.57
PTCD2-201ENST00000308077 PRAC2D3DTV9 90 aa5.26□□□□□ -1.57
PTCD2-201ENST00000308077 CXCL1P09341 107 aa5.26□□□□□ -1.57
PTCD2-201ENST00000308077 RNF212Q495C1 297 aa5.26□□□□□ -1.57
PTCD2-201ENST00000308077 TCF24Q7RTU0 167 aa5.26□□□□□ -1.57
PTCD2-201ENST00000308077 FAM24BQ8N5W8 94 aa5.26□□□□□ -1.57
PTCD2-201ENST00000308077 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.26□□□□□ -1.57
PTCD2-201ENST00000308077 DPF1Q92782 380 aa5.26□□□□□ -1.57
PTCD2-201ENST00000308077 FMC1Q96HJ9 113 aa5.26□□□□□ -1.57
PTCD2-201ENST00000308077 C20orf173Q96LM9 149 aa5.26□□□□□ -1.57
PTCD2-201ENST00000308077 SLC50A1Q9BRV3 221 aa5.26□□□□□ -1.57
PTCD2-201ENST00000308077 PGPEP1Q9NXJ5 209 aa5.26□□□□□ -1.57
PTCD2-201ENST00000308077 LY96Q9Y6Y9 160 aa5.26□□□□□ -1.57
PTCD2-201ENST00000308077 IGKV3-7A0A075B6H7 116 aa5.25□□□□□ -1.57
PTCD2-201ENST00000308077 IGKV2-40A0A087WW87 121 aaPredicted RBP5.25□□□□□ -1.57
PTCD2-201ENST00000308077 A0A087WWC5 75 aa5.25□□□□□ -1.57
PTCD2-201ENST00000308077 LTAP01374 205 aa5.25□□□□□ -1.57
PTCD2-201ENST00000308077 IGKV2D-40P01614 121 aaPredicted RBP5.25□□□□□ -1.57
PTCD2-201ENST00000308077 FOLR2P14207 255 aa5.25□□□□□ -1.57
PTCD2-201ENST00000308077 CBLN1P23435 193 aa5.25□□□□□ -1.57
PTCD2-201ENST00000308077 MEOX2P50222 304 aa5.25□□□□□ -1.57
PTCD2-201ENST00000308077 UBE2G1P62253 170 aa5.25□□□□□ -1.57
PTCD2-201ENST00000308077 OR5I1Q13606 314 aa5.25□□□□□ -1.57
PTCD2-201ENST00000308077 Q86TA4 180 aa5.25□□□□□ -1.57
PTCD2-201ENST00000308077 TMEM75Q8N9X5 138 aa5.25□□□□□ -1.57
PTCD2-201ENST00000308077 ASCL2Q99929 193 aa5.25□□□□□ -1.57
PTCD2-201ENST00000308077 MLXQ9UH92 298 aa5.25□□□□□ -1.57
PTCD2-201ENST00000308077 TGIF2-C20orf24A0A0A6YYL0 155 aa5.25□□□□□ -1.57
PTCD2-201ENST00000308077 CCL24O00175 119 aa5.25□□□□□ -1.57
PTCD2-201ENST00000308077 GCGP01275 180 aa5.25□□□□□ -1.57
PTCD2-201ENST00000308077 PSG3Q16557 428 aa5.25□□□□□ -1.57
PTCD2-201ENST00000308077 LCN12Q6JVE5 192 aa5.25□□□□□ -1.57
PTCD2-201ENST00000308077 BAGE2Q86Y30 109 aa5.25□□□□□ -1.57
PTCD2-201ENST00000308077 OR9G4Q8NGQ1 327 aa5.25□□□□□ -1.57
PTCD2-201ENST00000308077 C16orf92Q96LL3 132 aa5.25□□□□□ -1.57
PTCD2-201ENST00000308077 MLST8Q9BVC4 326 aa5.25□□□□□ -1.57
PTCD2-201ENST00000308077 NRN1Q9NPD7 142 aa5.25□□□□□ -1.57
PTCD2-201ENST00000308077 URGCP-MRPS24S4R325 110 aa5.25□□□□□ -1.57
PTCD2-201ENST00000308077 TRBV6-1A0A0K0K1D8 114 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms