RNA–Protein interactions for RNA: ENST00000305366.7

TM4SF1-201, Transcript of transmembrane 4 L six family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM4SF1, Length 1,771 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-201ENST00000305366 NOTCH1P46531 2555 aa6.14□□□□□ -1.43
TM4SF1-201ENST00000305366 IGHV2-26A0A0B4J1V2 119 aa6.13□□□□□ -1.43
TM4SF1-201ENST00000305366 GRIFINA4D1Z8 144 aa6.13□□□□□ -1.43
TM4SF1-201ENST00000305366 PEX7O00628 323 aa6.13□□□□□ -1.43
TM4SF1-201ENST00000305366 SERF1AO75920 110 aa6.13□□□□□ -1.43
TM4SF1-201ENST00000305366 COX7A1P24310 79 aa6.13□□□□□ -1.43
TM4SF1-201ENST00000305366 NSUN5P1Q3KNT7 163 aa6.13□□□□□ -1.43
TM4SF1-201ENST00000305366 TMEM190Q8WZ59 177 aa6.13□□□□□ -1.43
TM4SF1-201ENST00000305366 RNF5Q99942 180 aa6.13□□□□□ -1.43
TM4SF1-201ENST00000305366 KRTAP17-1Q9BYP8 105 aa6.13□□□□□ -1.43
TM4SF1-201ENST00000305366 C16orf95Q9H693 158 aa6.13□□□□□ -1.43
TM4SF1-201ENST00000305366 TPSG1Q9NRR2 321 aa6.13□□□□□ -1.43
TM4SF1-201ENST00000305366 MRPL36Q9P0J6 103 aaKnown RBP6.13□□□□□ -1.43
TM4SF1-201ENST00000305366 SH2D7A6NKC9 451 aaPredicted RBP6.13□□□□□ -1.43
TM4SF1-201ENST00000305366 M0QZK8 103 aa6.13□□□□□ -1.43
TM4SF1-201ENST00000305366 PYYP10082 97 aa6.13□□□□□ -1.43
TM4SF1-201ENST00000305366 MGST1P10620 155 aaKnown RBP6.13□□□□□ -1.43
TM4SF1-201ENST00000305366 UBE2E1P51965 193 aa6.13□□□□□ -1.43
TM4SF1-201ENST00000305366 TMEM183BQ1AE95 376 aa6.13□□□□□ -1.43
TM4SF1-201ENST00000305366 LINC00305Q7Z4B0 112 aa6.13□□□□□ -1.43
TM4SF1-201ENST00000305366 OR4C5Q8NGB2 326 aa6.13□□□□□ -1.43
TM4SF1-201ENST00000305366 C8orf46Q8TAG6 207 aa6.13□□□□□ -1.43
TM4SF1-201ENST00000305366 GRAMD2BQ96HH9 432 aa6.13□□□□□ -1.43
TM4SF1-201ENST00000305366 CLEC7AQ9BXN2 247 aa6.13□□□□□ -1.43
TM4SF1-201ENST00000305366 NAT8BQ9UHF3 227 aa6.13□□□□□ -1.43
TM4SF1-201ENST00000305366 KLF12Q9Y4X4 402 aa6.13□□□□□ -1.43
TM4SF1-201ENST00000305366 IGHV1-3A0A0C4DH29 117 aa6.12□□□□□ -1.43
TM4SF1-201ENST00000305366 A0A1B0GW15 77 aa6.12□□□□□ -1.43
TM4SF1-201ENST00000305366 BUB1B-PAK6H3BSN5 160 aa6.12□□□□□ -1.43
TM4SF1-201ENST00000305366 REG1AP05451 166 aa6.12□□□□□ -1.43
TM4SF1-201ENST00000305366 FRMD6-AS1P0C7T7 363 aa6.12□□□□□ -1.43
TM4SF1-201ENST00000305366 BRS3P32247 399 aa6.12□□□□□ -1.43
TM4SF1-201ENST00000305366 MFAP2P55001 183 aa6.12□□□□□ -1.43
TM4SF1-201ENST00000305366 FXYD3Q14802 87 aa6.12□□□□□ -1.43
TM4SF1-201ENST00000305366 TEX43Q6ZNM6 134 aa6.12□□□□□ -1.43
TM4SF1-201ENST00000305366 Q6ZWC4 215 aa6.12□□□□□ -1.43
TM4SF1-201ENST00000305366 MRPL52Q86TS9 123 aaKnown RBP6.12□□□□□ -1.43
TM4SF1-201ENST00000305366 BAGE3Q86Y29 109 aa6.12□□□□□ -1.43
TM4SF1-201ENST00000305366 BAGE2Q86Y30 109 aa6.12□□□□□ -1.43
TM4SF1-201ENST00000305366 KLHDC1Q8N7A1 406 aa6.12□□□□□ -1.43
TM4SF1-201ENST00000305366 RITA1Q96K30 269 aa6.12□□□□□ -1.43
TM4SF1-201ENST00000305366 GNB4Q9HAV0 340 aa6.12□□□□□ -1.43
TM4SF1-201ENST00000305366 F11RQ9Y624 299 aaKnown RBP6.12□□□□□ -1.43
TM4SF1-201ENST00000305366 TEX22C9J3V5 150 aa6.11□□□□□ -1.43
TM4SF1-201ENST00000305366 M0R1W7 72 aa6.11□□□□□ -1.43
TM4SF1-201ENST00000305366 BMPR1BO00238 502 aa6.11□□□□□ -1.43
TM4SF1-201ENST00000305366 HYPMO75409 117 aa6.11□□□□□ -1.43
TM4SF1-201ENST00000305366 TNXAQ16473 311 aa6.11□□□□□ -1.43
TM4SF1-201ENST00000305366 TPTE2P1Q5T6R2 138 aa6.11□□□□□ -1.43
TM4SF1-201ENST00000305366 HCP5Q6MZN7 132 aa6.11□□□□□ -1.43
TM4SF1-201ENST00000305366 MISP3Q96FF7 219 aa6.11□□□□□ -1.43
TM4SF1-201ENST00000305366 C20orf144Q9BQM9 153 aa6.11□□□□□ -1.43
TM4SF1-201ENST00000305366 EPDR1Q9UM22 224 aa6.11□□□□□ -1.43
TM4SF1-201ENST00000305366 TBL2Q9Y4P3 447 aaKnown RBP6.11□□□□□ -1.43
TM4SF1-201ENST00000305366 TNCP24821 2201 aa6.11□□□□□ -1.43
TM4SF1-201ENST00000305366 IGHV3-72A0A0B4J1Y9 119 aa6.11□□□□□ -1.43
TM4SF1-201ENST00000305366 KRTAP4-8A0A0G2JLE6 195 aa6.11□□□□□ -1.43
TM4SF1-201ENST00000305366 LY6LH3BQJ8 138 aa6.11□□□□□ -1.43
TM4SF1-201ENST00000305366 TCAPO15273 167 aa6.11□□□□□ -1.43
TM4SF1-201ENST00000305366 GPX1P07203 203 aa6.11□□□□□ -1.43
TM4SF1-201ENST00000305366 HIST1H1EP10412 219 aaKnown RBP6.11□□□□□ -1.43
TM4SF1-201ENST00000305366 GP9P14770 177 aa6.11□□□□□ -1.43
TM4SF1-201ENST00000305366 VAMP3Q15836 100 aa6.11□□□□□ -1.43
TM4SF1-201ENST00000305366 LINC01559Q495D7 138 aa6.11□□□□□ -1.43
TM4SF1-201ENST00000305366 ATP5L2Q7Z4Y8 100 aa6.11□□□□□ -1.43
TM4SF1-201ENST00000305366 PPP1R27Q86WC6 154 aa6.11□□□□□ -1.43
TM4SF1-201ENST00000305366 TMEM219Q86XT9 240 aa6.11□□□□□ -1.43
TM4SF1-201ENST00000305366 C5orf17Q8NAS9 161 aa6.11□□□□□ -1.43
TM4SF1-201ENST00000305366 TSKUQ8WUA8 353 aa6.11□□□□□ -1.43
TM4SF1-201ENST00000305366 KCNS1Q96KK3 526 aa6.11□□□□□ -1.43
TM4SF1-201ENST00000305366 LINC00479Q96M42 142 aa6.11□□□□□ -1.43
TM4SF1-201ENST00000305366 GPR82Q96P67 336 aa6.11□□□□□ -1.43
TM4SF1-201ENST00000305366 HSPB9Q9BQS6 159 aa6.11□□□□□ -1.43
TM4SF1-201ENST00000305366 MLST8Q9BVC4 326 aa6.11□□□□□ -1.43
TM4SF1-201ENST00000305366 ZNF331Q9NQX6 463 aaPredicted RBP6.11□□□□□ -1.43
TM4SF1-201ENST00000305366 SERTAD4Q9NUC0 356 aa6.11□□□□□ -1.43
TM4SF1-201ENST00000305366 MRPL27Q9P0M9 148 aaKnown RBP6.11□□□□□ -1.43
TM4SF1-201ENST00000305366 WNK1Q9H4A3 2382 aa6.1□□□□□ -1.43
TM4SF1-201ENST00000305366 CMYA5Q8N3K9 4069 aa6.1□□□□□ -1.43
TM4SF1-201ENST00000305366 A0A1W2PRX2 142 aa6.1□□□□□ -1.43
TM4SF1-201ENST00000305366 ZNF705FA8MVS1 300 aaPredicted RBP6.1□□□□□ -1.43
TM4SF1-201ENST00000305366 OR2J3O76001 311 aa6.1□□□□□ -1.43
TM4SF1-201ENST00000305366 BRI3O95415 125 aa6.1□□□□□ -1.43
TM4SF1-201ENST00000305366 TOMM40O96008 361 aa6.1□□□□□ -1.43
TM4SF1-201ENST00000305366 MOSP00540 346 aa6.1□□□□□ -1.43
TM4SF1-201ENST00000305366 IGHV3-48P01763 117 aa6.1□□□□□ -1.43
TM4SF1-201ENST00000305366 APCSP02743 223 aa6.1□□□□□ -1.43
TM4SF1-201ENST00000305366 SLC25A5P05141 298 aaKnown RBP6.1□□□□□ -1.43
TM4SF1-201ENST00000305366 NBEAP1P0C6P0 100 aa6.1□□□□□ -1.43
TM4SF1-201ENST00000305366 ZNF705DP0CH99 300 aaPredicted RBP6.1□□□□□ -1.43
TM4SF1-201ENST00000305366 ZNF705BP0CI00 300 aaPredicted RBP6.1□□□□□ -1.43
TM4SF1-201ENST00000305366 CD28P10747 220 aa6.1□□□□□ -1.43
TM4SF1-201ENST00000305366 ORM2P19652 201 aa6.1□□□□□ -1.43
TM4SF1-201ENST00000305366 CNTFRP26992 372 aa6.1□□□□□ -1.43
TM4SF1-201ENST00000305366 CAMPP49913 170 aa6.1□□□□□ -1.43
TM4SF1-201ENST00000305366 TCL1AP56279 114 aa6.1□□□□□ -1.43
TM4SF1-201ENST00000305366 UBE2G1P62253 170 aa6.1□□□□□ -1.43
TM4SF1-201ENST00000305366 C5orf47Q569G3 176 aa6.1□□□□□ -1.43
TM4SF1-201ENST00000305366 OR1B1Q8NGR6 318 aa6.1□□□□□ -1.43
TM4SF1-201ENST00000305366 RPEQ96AT9 228 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms