RNA–Protein interactions for RNA: ENST00000304778.11

LONRF3-201, Transcript of LON peptidase N-terminal domain and ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene LONRF3, Length 2,989 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3-201ENST00000304778 TCRAP04437 139 aa12.76□□□□□ -0.37
LONRF3-201ENST00000304778 HSD52Q0P140 79 aa12.76□□□□□ -0.37
LONRF3-201ENST00000304778 TMUB1Q9BVT8 246 aa12.76□□□□□ -0.37
LONRF3-201ENST00000304778 EPG5Q9HCE0 2579 aa12.76□□□□□ -0.37
LONRF3-201ENST00000304778 C19orf71A6NCJ1 209 aa12.76□□□□□ -0.37
LONRF3-201ENST00000304778 A8MWL6 223 aa12.76□□□□□ -0.37
LONRF3-201ENST00000304778 BUB1B-PAK6H3BSN5 160 aa12.76□□□□□ -0.37
LONRF3-201ENST00000304778 FGF6P10767 208 aa12.76□□□□□ -0.37
LONRF3-201ENST00000304778 GTSF1Q8WW33 167 aa12.76□□□□□ -0.37
LONRF3-201ENST00000304778 F11RQ9Y624 299 aaKnown RBP12.76□□□□□ -0.37
LONRF3-201ENST00000304778 SOX21Q9Y651 276 aaPredicted RBP12.76□□□□□ -0.37
LONRF3-201ENST00000304778 HIVEP3Q5T1R4 2406 aa12.76□□□□□ -0.37
LONRF3-201ENST00000304778 NCR2O95944 276 aa12.75□□□□□ -0.37
LONRF3-201ENST00000304778 P01737 135 aa12.75□□□□□ -0.37
LONRF3-201ENST00000304778 ONECUT1Q9UBC0 465 aa12.75□□□□□ -0.37
LONRF3-201ENST00000304778 A0A1W2PPR1 153 aa12.75□□□□□ -0.37
LONRF3-201ENST00000304778 TIMD4Q96H15 378 aa12.75□□□□□ -0.37
LONRF3-201ENST00000304778 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.75□□□□□ -0.37
LONRF3-201ENST00000304778 HIGD1AQ9Y241 93 aa12.75□□□□□ -0.37
LONRF3-201ENST00000304778 INSIG2Q9Y5U4 225 aa12.75□□□□□ -0.37
LONRF3-201ENST00000304778 TRAV8-1A0A0A6YYK1 113 aa12.74□□□□□ -0.37
LONRF3-201ENST00000304778 IGHV1-3A0A0C4DH29 117 aa12.74□□□□□ -0.37
LONRF3-201ENST00000304778 TEX22C9J3V5 150 aa12.74□□□□□ -0.37
LONRF3-201ENST00000304778 ZNF207O43670 478 aaKnown RBP12.74□□□□□ -0.37
LONRF3-201ENST00000304778 SCGB2A2Q13296 93 aa12.74□□□□□ -0.37
LONRF3-201ENST00000304778 PPP1R27Q86WC6 154 aa12.74□□□□□ -0.37
LONRF3-201ENST00000304778 LY6G5BQ8NDX9 201 aa12.74□□□□□ -0.37
LONRF3-201ENST00000304778 NEU4Q8WWR8 484 aaPredicted RBP12.74□□□□□ -0.37
LONRF3-201ENST00000304778 FBLL1A6NHQ2 334 aaKnown RBP12.74□□□□□ -0.37
LONRF3-201ENST00000304778 RBP4P02753 201 aa12.74□□□□□ -0.37
LONRF3-201ENST00000304778 RAB9AP51151 201 aa12.74□□□□□ -0.37
LONRF3-201ENST00000304778 GFRA4Q9GZZ7 299 aa12.74□□□□□ -0.37
LONRF3-201ENST00000304778 TSSC4Q9Y5U2 329 aaPredicted RBP12.74□□□□□ -0.37
LONRF3-201ENST00000304778 Q86TA4 180 aa12.73□□□□□ -0.37
LONRF3-201ENST00000304778 FABP2P12104 132 aa12.72□□□□□ -0.37
LONRF3-201ENST00000304778 GNLYP22749 145 aa12.72□□□□□ -0.37
LONRF3-201ENST00000304778 FXYD7P58549 80 aa12.72□□□□□ -0.37
LONRF3-201ENST00000304778 LYZP61626 148 aa12.72□□□□□ -0.37
LONRF3-201ENST00000304778 DAZAP1Q96EP5 407 aaKnown RBP12.72□□□□□ -0.37
LONRF3-201ENST00000304778 OTORQ9NRC9 128 aa12.72□□□□□ -0.37
LONRF3-201ENST00000304778 RBPMS2Q6ZRY4 209 aaKnown RBP12.72□□□□□ -0.37
LONRF3-201ENST00000304778 DTX2Q86UW9 622 aa12.72□□□□□ -0.37
LONRF3-201ENST00000304778 ITLN2Q8WWU7 325 aaPredicted RBP12.72□□□□□ -0.37
LONRF3-201ENST00000304778 TMEM14CQ9P0S9 112 aa12.72□□□□□ -0.37
LONRF3-201ENST00000304778 GAGE12HA6NDE8 117 aa12.72□□□□□ -0.37
LONRF3-201ENST00000304778 NPIPB6E9PJ23 425 aa12.72□□□□□ -0.37
LONRF3-201ENST00000304778 CHEK1O14757 476 aa12.72□□□□□ -0.37
LONRF3-201ENST00000304778 CEACAM3P40198 252 aa12.72□□□□□ -0.37
LONRF3-201ENST00000304778 PSG3Q16557 428 aa12.72□□□□□ -0.37
LONRF3-201ENST00000304778 RPEQ96AT9 228 aa12.72□□□□□ -0.37
LONRF3-201ENST00000304778 SLC25A39Q9BZJ4 359 aaPredicted RBP12.72□□□□□ -0.37
LONRF3-201ENST00000304778 AKAP6Q13023 2319 aa12.71□□□□□ -0.37
LONRF3-201ENST00000304778 USP24Q9UPU5 2620 aa12.71□□□□□ -0.37
LONRF3-201ENST00000304778 A1L4Q6 167 aa12.71□□□□□ -0.37
LONRF3-201ENST00000304778 SRSF12Q8WXF0 261 aaKnown RBP12.71□□□□□ -0.37
LONRF3-201ENST00000304778 ZNF747Q9BV97 191 aa12.71□□□□□ -0.37
LONRF3-201ENST00000304778 COL12A1Q99715 3063 aa12.71□□□□□ -0.37
LONRF3-201ENST00000304778 TRAV26-1A0A087WT03 109 aa12.71□□□□□ -0.38
LONRF3-201ENST00000304778 TM4SF20Q53R12 229 aa12.71□□□□□ -0.38
LONRF3-201ENST00000304778 FBXL15Q9H469 300 aa12.71□□□□□ -0.38
LONRF3-201ENST00000304778 LY6LH3BQJ8 138 aa12.7□□□□□ -0.38
LONRF3-201ENST00000304778 CKS1BP61024 79 aa12.7□□□□□ -0.38
LONRF3-201ENST00000304778 CD300EQ496F6 205 aaPredicted RBP12.7□□□□□ -0.38
LONRF3-201ENST00000304778 NDFIP1Q9BT67 221 aa12.7□□□□□ -0.38
LONRF3-201ENST00000304778 IGSF10Q6WRI0 2623 aa12.7□□□□□ -0.38
LONRF3-201ENST00000304778 I3L2K1 104 aa12.7□□□□□ -0.38
LONRF3-201ENST00000304778 NDUFS7O75251 213 aa12.7□□□□□ -0.38
LONRF3-201ENST00000304778 SAMD5Q5TGI4 173 aa12.7□□□□□ -0.38
LONRF3-201ENST00000304778 FAM106CPP0CH98 169 aa12.69□□□□□ -0.38
LONRF3-201ENST00000304778 HOXB4P17483 251 aaPredicted RBP12.69□□□□□ -0.38
LONRF3-201ENST00000304778 COL8A1P27658 744 aa12.69□□□□□ -0.38
LONRF3-201ENST00000304778 FAM106AQ4KMX7 169 aa12.69□□□□□ -0.38
LONRF3-201ENST00000304778 BOD1L2Q8IYS8 172 aa12.69□□□□□ -0.38
LONRF3-201ENST00000304778 CIARTQ8N365 385 aaPredicted RBP12.69□□□□□ -0.38
LONRF3-201ENST00000304778 RASL11BQ9BPW5 248 aa12.69□□□□□ -0.38
LONRF3-201ENST00000304778 UBTD1Q9HAC8 227 aa12.69□□□□□ -0.38
LONRF3-201ENST00000304778 C19orf84I3L1E1 186 aa12.69□□□□□ -0.38
LONRF3-201ENST00000304778 IGLV2-11P01706 119 aa12.69□□□□□ -0.38
LONRF3-201ENST00000304778 APOHP02749 345 aaPredicted RBP12.69□□□□□ -0.38
LONRF3-201ENST00000304778 CCDC144NLQ6NUI1 221 aa12.69□□□□□ -0.38
LONRF3-201ENST00000304778 ADAMTSL5Q6ZMM2 481 aa12.69□□□□□ -0.38
LONRF3-201ENST00000304778 AP5S1Q9NUS5 200 aa12.69□□□□□ -0.38
LONRF3-201ENST00000304778 EXOC3-AS1Q8N2X6 119 aa12.69□□□□□ -0.38
LONRF3-201ENST00000304778 OR8A1Q8NGG7 326 aa12.69□□□□□ -0.38
LONRF3-201ENST00000304778 TMEM189A5PLL7 270 aa12.68□□□□□ -0.38
LONRF3-201ENST00000304778 SMAD7O15105 426 aaKnown RBP12.68□□□□□ -0.38
LONRF3-201ENST00000304778 CRYBA4P53673 196 aa12.68□□□□□ -0.38
LONRF3-201ENST00000304778 GOLT1AQ6ZVE7 132 aa12.68□□□□□ -0.38
LONRF3-201ENST00000304778 ARHGAP32A7KAX9 2087 aa12.68□□□□□ -0.38
LONRF3-201ENST00000304778 FCGR2BP31994 310 aaPredicted RBP12.68□□□□□ -0.38
LONRF3-201ENST00000304778 KLRD1Q13241 179 aa12.68□□□□□ -0.38
LONRF3-201ENST00000304778 IGFBPL1Q8WX77 278 aa12.68□□□□□ -0.38
LONRF3-201ENST00000304778 CFAP46Q8IYW2 2715 aa12.68□□□□□ -0.38
LONRF3-201ENST00000304778 TRBV6-1A0A0K0K1D8 114 aa12.67□□□□□ -0.38
LONRF3-201ENST00000304778 IGKV1-17P01599 117 aa12.67□□□□□ -0.38
LONRF3-201ENST00000304778 PRNTQ86SH4 94 aa12.67□□□□□ -0.38
LONRF3-201ENST00000304778 PIP4P2Q8N4L2 257 aa12.67□□□□□ -0.38
LONRF3-201ENST00000304778 PLGLAQ15195 96 aa12.67□□□□□ -0.38
LONRF3-201ENST00000304778 FA2HQ7L5A8 372 aa12.67□□□□□ -0.38
LONRF3-201ENST00000304778 TMEM190Q8WZ59 177 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms