RNA–Protein interactions for RNA: ENST00000302251.9

PDGFD-201, Transcript of platelet derived growth factor D, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDGFD, Length 4,052 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFD-201ENST00000302251 A0A1B0GW15 77 aa9.74□□□□□ -0.85
PDGFD-201ENST00000302251 SH2D1AO60880 128 aa9.74□□□□□ -0.85
PDGFD-201ENST00000302251 RPL13AP40429 203 aaKnown RBP9.74□□□□□ -0.85
PDGFD-201ENST00000302251 EMP1P54849 157 aa9.74□□□□□ -0.85
PDGFD-201ENST00000302251 CD300EQ496F6 205 aaPredicted RBP9.74□□□□□ -0.85
PDGFD-201ENST00000302251 IGFBPL1Q8WX77 278 aa9.74□□□□□ -0.85
PDGFD-201ENST00000302251 C1RLQ9NZP8 487 aa9.74□□□□□ -0.85
PDGFD-201ENST00000302251 TRGV9Q99603 122 aa9.74□□□□□ -0.85
PDGFD-201ENST00000302251 E7EUB6 86 aa9.74□□□□□ -0.85
PDGFD-201ENST00000302251 LINC00310P59036 64 aa9.74□□□□□ -0.85
PDGFD-201ENST00000302251 TMEM30BQ3MIR4 351 aa9.74□□□□□ -0.85
PDGFD-201ENST00000302251 GDF5OSQ5U4N7 250 aa9.74□□□□□ -0.85
PDGFD-201ENST00000302251 ZNF474Q6S9Z5 364 aaPredicted RBP9.74□□□□□ -0.85
PDGFD-201ENST00000302251 PATE2Q6UY27 113 aa9.74□□□□□ -0.85
PDGFD-201ENST00000302251 TMEM75Q8N9X5 138 aa9.74□□□□□ -0.85
PDGFD-201ENST00000302251 TMEM238C9JI98 176 aa9.73□□□□□ -0.85
PDGFD-201ENST00000302251 LY6HO94772 140 aa9.73□□□□□ -0.85
PDGFD-201ENST00000302251 FAM120AOSQ5T036 256 aa9.73□□□□□ -0.85
PDGFD-201ENST00000302251 SIGLEC8Q9NYZ4 499 aa9.73□□□□□ -0.85
PDGFD-201ENST00000302251 DPM3Q9P2X0 92 aa9.73□□□□□ -0.85
PDGFD-201ENST00000302251 ZNF503Q96F45 646 aa9.73□□□□□ -0.85
PDGFD-201ENST00000302251 CHAC1Q9BUX1 264 aa9.73□□□□□ -0.85
PDGFD-201ENST00000302251 ZNF747Q9BV97 191 aa9.73□□□□□ -0.85
PDGFD-201ENST00000302251 LOC400499M0QZD8 3231 aa9.73□□□□□ -0.85
PDGFD-201ENST00000302251 RBX1P62877 108 aa9.73□□□□□ -0.85
PDGFD-201ENST00000302251 CLEC19AQ6UXS0 136 aa9.73□□□□□ -0.85
PDGFD-201ENST00000302251 GTSF1Q8WW33 167 aa9.73□□□□□ -0.85
PDGFD-201ENST00000302251 MRPL36Q9P0J6 103 aaKnown RBP9.73□□□□□ -0.85
PDGFD-201ENST00000302251 LINC00527Q9UJ94 153 aa9.73□□□□□ -0.85
PDGFD-201ENST00000302251 SIGLEC9Q9Y336 463 aa9.73□□□□□ -0.85
PDGFD-201ENST00000302251 C2orf70A6NJV1 201 aa9.72□□□□□ -0.85
PDGFD-201ENST00000302251 FNDC10F2Z333 226 aa9.72□□□□□ -0.85
PDGFD-201ENST00000302251 H3BMG7 143 aa9.72□□□□□ -0.85
PDGFD-201ENST00000302251 METTL26Q96S19 204 aa9.72□□□□□ -0.85
PDGFD-201ENST00000302251 TNRC6BQ9UPQ9 1833 aaKnown RBP9.72□□□□□ -0.85
PDGFD-201ENST00000302251 H3BRM9 83 aa9.72□□□□□ -0.85
PDGFD-201ENST00000302251 DPF1Q92782 380 aa9.72□□□□□ -0.85
PDGFD-201ENST00000302251 CSTL1Q9H114 145 aa9.72□□□□□ -0.85
PDGFD-201ENST00000302251 TLN1Q9Y490 2541 aaKnown RBP9.72□□□□□ -0.85
PDGFD-201ENST00000302251 NBEAQ8NFP9 2946 aa9.72□□□□□ -0.85
PDGFD-201ENST00000302251 HOXA3O43365 443 aaPredicted RBP9.72□□□□□ -0.85
PDGFD-201ENST00000302251 IGHV1-8P0DP01 117 aa9.72□□□□□ -0.85
PDGFD-201ENST00000302251 CKS1BP61024 79 aa9.72□□□□□ -0.85
PDGFD-201ENST00000302251 FAM167A-AS1Q96KT0 104 aa9.72□□□□□ -0.85
PDGFD-201ENST00000302251 COL27A1Q8IZC6 1860 aaPredicted RBP9.72□□□□□ -0.85
PDGFD-201ENST00000302251 P0C879 139 aa9.72□□□□□ -0.85
PDGFD-201ENST00000302251 ERCC8Q13216 396 aa9.72□□□□□ -0.85
PDGFD-201ENST00000302251 NXT2Q9NPJ8 142 aaKnown RBP9.72□□□□□ -0.85
PDGFD-201ENST00000302251 CEP295Q9C0D2 2601 aa9.71□□□□□ -0.85
PDGFD-201ENST00000302251 TTC32Q5I0X7 151 aa9.71□□□□□ -0.85
PDGFD-201ENST00000302251 IGHV3-64A0A075B6Q5 118 aa9.71□□□□□ -0.86
PDGFD-201ENST00000302251 ZNF815PA8K554 130 aa9.71□□□□□ -0.86
PDGFD-201ENST00000302251 OR10J6PQ8NGY7 276 aa9.71□□□□□ -0.86
PDGFD-201ENST00000302251 IGF2BP2-AS1Q96M15 143 aa9.71□□□□□ -0.86
PDGFD-201ENST00000302251 IGHV1-3A0A0C4DH29 117 aa9.71□□□□□ -0.86
PDGFD-201ENST00000302251 TMEM8BA6NDV4 472 aa9.71□□□□□ -0.86
PDGFD-201ENST00000302251 NPYP01303 97 aa9.71□□□□□ -0.86
PDGFD-201ENST00000302251 SP9P0CG40 484 aa9.71□□□□□ -0.86
PDGFD-201ENST00000302251 FOXC1Q12948 553 aa9.71□□□□□ -0.86
PDGFD-201ENST00000302251 LINC00322Q6ZN03 302 aaPredicted RBP9.71□□□□□ -0.86
PDGFD-201ENST00000302251 BSNQ9UPA5 3926 aa9.71□□□□□ -0.86
PDGFD-201ENST00000302251 TEX48A0A1B0GUV7 120 aa9.7□□□□□ -0.86
PDGFD-201ENST00000302251 AZU1P20160 251 aa9.7□□□□□ -0.86
PDGFD-201ENST00000302251 CTRLP40313 264 aa9.7□□□□□ -0.86
PDGFD-201ENST00000302251 MRPL51Q4U2R6 128 aaKnown RBP9.7□□□□□ -0.86
PDGFD-201ENST00000302251 DGAT2L7PQ6IED9 249 aa9.7□□□□□ -0.86
PDGFD-201ENST00000302251 CCDC144NLQ6NUI1 221 aa9.7□□□□□ -0.86
PDGFD-201ENST00000302251 K7EP34 96 aa9.7□□□□□ -0.86
PDGFD-201ENST00000302251 NBR2O15453 112 aa9.7□□□□□ -0.86
PDGFD-201ENST00000302251 FAM104BQ5XKR9 115 aa9.7□□□□□ -0.86
PDGFD-201ENST00000302251 C1orf229Q6ZS94 237 aaPredicted RBP9.7□□□□□ -0.86
PDGFD-201ENST00000302251 SH2D6Q7Z4S9 175 aa9.7□□□□□ -0.86
PDGFD-201ENST00000302251 ARPC1AQ92747 370 aa9.7□□□□□ -0.86
PDGFD-201ENST00000302251 ZNF256Q9Y2P7 627 aaPredicted RBP9.7□□□□□ -0.86
PDGFD-201ENST00000302251 A0A1W2PPM0 123 aa9.7□□□□□ -0.86
PDGFD-201ENST00000302251 IGLV2-8P01709 118 aa9.7□□□□□ -0.86
PDGFD-201ENST00000302251 LGALS3P17931 250 aaKnown RBP9.7□□□□□ -0.86
PDGFD-201ENST00000302251 KLRD1Q13241 179 aa9.7□□□□□ -0.86
PDGFD-201ENST00000302251 KLF5Q13887 457 aaPredicted RBP9.7□□□□□ -0.86
PDGFD-201ENST00000302251 RNASE6Q93091 150 aaKnown RBP9.7□□□□□ -0.86
PDGFD-201ENST00000302251 TRAV8-2A0A0B4J237 113 aa9.69□□□□□ -0.86
PDGFD-201ENST00000302251 PF4V1P10720 104 aa9.69□□□□□ -0.86
PDGFD-201ENST00000302251 FAM208BQ5VWN6 2430 aa9.69□□□□□ -0.86
PDGFD-201ENST00000302251 TRAV26-2A0A0B4J265 109 aa9.69□□□□□ -0.86
PDGFD-201ENST00000302251 TMEM178BH3BS89 294 aa9.69□□□□□ -0.86
PDGFD-201ENST00000302251 CD59P13987 128 aa9.69□□□□□ -0.86
PDGFD-201ENST00000302251 PRTN3P24158 256 aa9.69□□□□□ -0.86
PDGFD-201ENST00000302251 RITA1Q96K30 269 aa9.69□□□□□ -0.86
PDGFD-201ENST00000302251 PGPEP1Q9NXJ5 209 aa9.69□□□□□ -0.86
PDGFD-201ENST00000302251 SMG1Q96Q15 3661 aaKnown RBP9.69□□□□□ -0.86
PDGFD-201ENST00000302251 SPRY2O43597 315 aa9.68□□□□□ -0.86
PDGFD-201ENST00000302251 TNFRSF6BO95407 300 aa9.68□□□□□ -0.86
PDGFD-201ENST00000302251 PPBPP02775 128 aa9.68□□□□□ -0.86
PDGFD-201ENST00000302251 FAM106CPP0CH98 169 aa9.68□□□□□ -0.86
PDGFD-201ENST00000302251 FAM106AQ4KMX7 169 aa9.68□□□□□ -0.86
PDGFD-201ENST00000302251 PVRIGQ6DKI7 326 aa9.68□□□□□ -0.86
PDGFD-201ENST00000302251 WIPF2Q8TF74 440 aaPredicted RBP9.68□□□□□ -0.86
PDGFD-201ENST00000302251 GFRA4Q9GZZ7 299 aa9.68□□□□□ -0.86
PDGFD-201ENST00000302251 GATA1P15976 413 aaPredicted RBP9.68□□□□□ -0.86
PDGFD-201ENST00000302251 SRSF1Q07955 248 aaKnown RBP eCLIP9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms