RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 COL25A1Q9BXS0 654 aaPredicted RBP10.63□□□□□ -0.71
CASC4-201ENST00000299957 BEX4Q9NWD9 120 aaPredicted RBP10.63□□□□□ -0.71
CASC4-201ENST00000299957 PRSS2P07478 247 aa10.63□□□□□ -0.71
CASC4-201ENST00000299957 UBE2V1Q13404 147 aa10.63□□□□□ -0.71
CASC4-201ENST00000299957 FAM169BQ8N8A8 192 aa10.63□□□□□ -0.71
CASC4-201ENST00000299957 SH2D1AO60880 128 aa10.62□□□□□ -0.71
CASC4-201ENST00000299957 TRGV9Q99603 122 aa10.62□□□□□ -0.71
CASC4-201ENST00000299957 VKORC1Q9BQB6 163 aa10.62□□□□□ -0.71
CASC4-201ENST00000299957 COX11Q9Y6N1 276 aa10.62□□□□□ -0.71
CASC4-201ENST00000299957 SMIM27A0A1W2PRY6 76 aa10.62□□□□□ -0.71
CASC4-201ENST00000299957 P0C879 139 aa10.62□□□□□ -0.71
CASC4-201ENST00000299957 TMEM30BQ3MIR4 351 aa10.62□□□□□ -0.71
CASC4-201ENST00000299957 OR1N2Q8NGR9 330 aa10.62□□□□□ -0.71
CASC4-201ENST00000299957 TP53TG3Q9ULZ0 132 aa10.62□□□□□ -0.71
CASC4-201ENST00000299957 RAXQ9Y2V3 346 aa10.62□□□□□ -0.71
CASC4-201ENST00000299957 NCKAP5O14513 1909 aa10.62□□□□□ -0.71
CASC4-201ENST00000299957 G3V318 75 aa10.62□□□□□ -0.71
CASC4-201ENST00000299957 HBDP02042 147 aa10.62□□□□□ -0.71
CASC4-201ENST00000299957 PSG9Q00887 426 aa10.62□□□□□ -0.71
CASC4-201ENST00000299957 DDB2Q92466 427 aa10.62□□□□□ -0.71
CASC4-201ENST00000299957 TTTY13Q9BZ97 58 aa10.62□□□□□ -0.71
CASC4-201ENST00000299957 C19orf67A6NJJ6 358 aa10.61□□□□□ -0.71
CASC4-201ENST00000299957 IGHV3OR16-12A0A075B7B8 117 aa10.61□□□□□ -0.71
CASC4-201ENST00000299957 TRAV30A0A087WSZ9 112 aa10.61□□□□□ -0.71
CASC4-201ENST00000299957 FABP5P3A8MUU1 101 aa10.61□□□□□ -0.71
CASC4-201ENST00000299957 TOMM40O96008 361 aa10.61□□□□□ -0.71
CASC4-201ENST00000299957 FAM167A-AS1Q96KT0 104 aa10.61□□□□□ -0.71
CASC4-201ENST00000299957 LRP4O75096 1905 aa10.61□□□□□ -0.71
CASC4-201ENST00000299957 LINC00322Q6ZN03 302 aaPredicted RBP10.61□□□□□ -0.71
CASC4-201ENST00000299957 OR10J6PQ8NGY7 276 aa10.61□□□□□ -0.71
CASC4-201ENST00000299957 ZNF418Q8TF45 676 aaPredicted RBP10.61□□□□□ -0.71
CASC4-201ENST00000299957 MRPL27Q9P0M9 148 aaKnown RBP10.61□□□□□ -0.71
CASC4-201ENST00000299957 TRAV26-2A0A0B4J265 109 aa10.6□□□□□ -0.71
CASC4-201ENST00000299957 TMEM155Q4W5P6 130 aa10.6□□□□□ -0.71
CASC4-201ENST00000299957 ZNF833PQ6ZTB9 187 aa10.6□□□□□ -0.71
CASC4-201ENST00000299957 CHODLQ9H9P2 273 aa10.6□□□□□ -0.71
CASC4-201ENST00000299957 ST20Q9HBF5 79 aa10.6□□□□□ -0.71
CASC4-201ENST00000299957 ZNF256Q9Y2P7 627 aaPredicted RBP10.6□□□□□ -0.71
CASC4-201ENST00000299957 CCL25O15444 150 aa10.6□□□□□ -0.71
CASC4-201ENST00000299957 RNASE4P34096 147 aaKnown RBP10.6□□□□□ -0.71
CASC4-201ENST00000299957 TMEM170BQ5T4T1 132 aa10.6□□□□□ -0.71
CASC4-201ENST00000299957 IGHV3-64A0A075B6Q5 118 aa10.6□□□□□ -0.71
CASC4-201ENST00000299957 IGLC7A0M8Q6 106 aa10.6□□□□□ -0.71
CASC4-201ENST00000299957 NDUFB8O95169 186 aa10.6□□□□□ -0.71
CASC4-201ENST00000299957 TDGF1P13385 188 aa10.6□□□□□ -0.71
CASC4-201ENST00000299957 PET117Q6UWS5 81 aa10.6□□□□□ -0.71
CASC4-201ENST00000299957 ATP5L2Q7Z4Y8 100 aa10.6□□□□□ -0.71
CASC4-201ENST00000299957 TNRC6AQ8NDV7 1962 aaKnown RBP10.6□□□□□ -0.71
CASC4-201ENST00000299957 CEACAM8P31997 349 aaPredicted RBP10.59□□□□□ -0.71
CASC4-201ENST00000299957 PLA2G2CQ5R387 149 aa10.59□□□□□ -0.71
CASC4-201ENST00000299957 FAM120AOSQ5T036 256 aa10.59□□□□□ -0.71
CASC4-201ENST00000299957 OR2K2Q8NGT1 345 aa10.59□□□□□ -0.71
CASC4-201ENST00000299957 GATA1P15976 413 aaPredicted RBP10.59□□□□□ -0.71
CASC4-201ENST00000299957 GAGE12BA1L429 117 aa10.59□□□□□ -0.71
CASC4-201ENST00000299957 OR11H12B2RN74 326 aa10.59□□□□□ -0.71
CASC4-201ENST00000299957 SMIM13P0DJ93 91 aa10.59□□□□□ -0.71
CASC4-201ENST00000299957 C5orf64Q2M2E5 130 aa10.59□□□□□ -0.71
CASC4-201ENST00000299957 BCL6BQ8N143 479 aaPredicted RBP10.59□□□□□ -0.71
CASC4-201ENST00000299957 OR11H1Q8NG94 326 aa10.59□□□□□ -0.71
CASC4-201ENST00000299957 OR11H2Q8NH07 326 aa10.59□□□□□ -0.71
CASC4-201ENST00000299957 MSRB1Q9NZV6 116 aa10.59□□□□□ -0.71
CASC4-201ENST00000299957 IGLC1P0CG04 106 aa10.58□□□□□ -0.71
CASC4-201ENST00000299957 ATP5G2Q06055 141 aa10.58□□□□□ -0.71
CASC4-201ENST00000299957 PSG3Q16557 428 aa10.58□□□□□ -0.71
CASC4-201ENST00000299957 ZC2HC1BQ5TFG8 222 aa10.58□□□□□ -0.71
CASC4-201ENST00000299957 GTSF1Q8WW33 167 aa10.58□□□□□ -0.71
CASC4-201ENST00000299957 CHCHD1Q96BP2 118 aaKnown RBP10.58□□□□□ -0.71
CASC4-201ENST00000299957 GDF5OSQ5U4N7 250 aa10.58□□□□□ -0.72
CASC4-201ENST00000299957 RNASE8Q8TDE3 154 aaKnown RBP10.58□□□□□ -0.72
CASC4-201ENST00000299957 ORAOV1Q8WV07 137 aa10.58□□□□□ -0.72
CASC4-201ENST00000299957 SCGB3A1Q96QR1 104 aa10.58□□□□□ -0.72
CASC4-201ENST00000299957 LHBP01229 141 aa10.58□□□□□ -0.72
CASC4-201ENST00000299957 SFTPCP11686 197 aa10.58□□□□□ -0.72
CASC4-201ENST00000299957 VGLL1Q99990 258 aa10.58□□□□□ -0.72
CASC4-201ENST00000299957 GATA4P43694 442 aa10.58□□□□□ -0.72
CASC4-201ENST00000299957 VMO1Q7Z5L0 202 aa10.58□□□□□ -0.72
CASC4-201ENST00000299957 SOX21Q9Y651 276 aaPredicted RBP10.58□□□□□ -0.72
CASC4-201ENST00000299957 ADGRG4Q8IZF6 3080 aa10.57□□□□□ -0.72
CASC4-201ENST00000299957 PVRIGQ6DKI7 326 aa10.57□□□□□ -0.72
CASC4-201ENST00000299957 DUX5Q96PT3 197 aa10.57□□□□□ -0.72
CASC4-201ENST00000299957 ATG2AQ2TAZ0 1938 aa10.57□□□□□ -0.72
CASC4-201ENST00000299957 CPAMD8Q8IZJ3 1885 aa10.57□□□□□ -0.72
CASC4-201ENST00000299957 FAM231BA6NCW3 169 aa10.57□□□□□ -0.72
CASC4-201ENST00000299957 CD300EQ496F6 205 aaPredicted RBP10.57□□□□□ -0.72
CASC4-201ENST00000299957 TMEM158Q8WZ71 300 aa10.57□□□□□ -0.72
CASC4-201ENST00000299957 TRBV19A0A075B6N1 114 aa10.56□□□□□ -0.72
CASC4-201ENST00000299957 KIR3DS1Q14943 382 aa10.56□□□□□ -0.72
CASC4-201ENST00000299957 ZNF56Q15929 161 aa10.56□□□□□ -0.72
CASC4-201ENST00000299957 A0A0G2JLM5 398 aa10.56□□□□□ -0.72
CASC4-201ENST00000299957 TMEM249Q2WGJ8 235 aa10.56□□□□□ -0.72
CASC4-201ENST00000299957 Q5PR19 223 aa10.56□□□□□ -0.72
CASC4-201ENST00000299957 C14orf178Q8N769 122 aaPredicted RBP10.56□□□□□ -0.72
CASC4-201ENST00000299957 SHANK2-AS3Q9BTD1 123 aa10.56□□□□□ -0.72
CASC4-201ENST00000299957 CYSLTR1Q9Y271 337 aa10.56□□□□□ -0.72
CASC4-201ENST00000299957 DMXL2Q8TDJ6 3036 aa10.56□□□□□ -0.72
CASC4-201ENST00000299957 LOC400499M0QZD8 3231 aa10.55□□□□□ -0.72
CASC4-201ENST00000299957 ATMQ13315 3056 aa10.55□□□□□ -0.72
CASC4-201ENST00000299957 A0A1B0GWB2 263 aa10.55□□□□□ -0.72
CASC4-201ENST00000299957 NPYP01303 97 aa10.55□□□□□ -0.72
CASC4-201ENST00000299957 DEFB1P60022 68 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms