RNA–Protein interactions for RNA: ENST00000297661.8

UBAP1-201, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-201ENST00000297661 A0A1B0GV72 72 aa12.36□□□□□ -0.43
UBAP1-201ENST00000297661 E7EQL1 145 aa12.36□□□□□ -0.43
UBAP1-201ENST00000297661 FSTL3O95633 263 aa12.36□□□□□ -0.43
UBAP1-201ENST00000297661 CEACAM3P40198 252 aa12.36□□□□□ -0.43
UBAP1-201ENST00000297661 FA2HQ7L5A8 372 aa12.36□□□□□ -0.43
UBAP1-201ENST00000297661 ARHGAP32A7KAX9 2087 aa12.36□□□□□ -0.43
UBAP1-201ENST00000297661 HAX1O00165 279 aa12.35□□□□□ -0.43
UBAP1-201ENST00000297661 IGHV1-8P0DP01 117 aa12.35□□□□□ -0.43
UBAP1-201ENST00000297661 ATP5IP56385 69 aaPredicted RBP12.35□□□□□ -0.43
UBAP1-201ENST00000297661 PRSS3P2Q8NHM4 247 aa12.35□□□□□ -0.43
UBAP1-201ENST00000297661 LTAP01374 205 aa12.35□□□□□ -0.43
UBAP1-201ENST00000297661 COX7A1P24310 79 aa12.35□□□□□ -0.43
UBAP1-201ENST00000297661 SUB1P53999 127 aaKnown RBP eCLIP12.35□□□□□ -0.43
UBAP1-201ENST00000297661 DLX6P56179 175 aa12.35□□□□□ -0.43
UBAP1-201ENST00000297661 VMA21Q3ZAQ7 101 aa12.35□□□□□ -0.43
UBAP1-201ENST00000297661 SAMD5Q5TGI4 173 aa12.35□□□□□ -0.43
UBAP1-201ENST00000297661 Q71RC1 249 aaPredicted RBP12.35□□□□□ -0.43
UBAP1-201ENST00000297661 INSIG2Q9Y5U4 225 aa12.35□□□□□ -0.43
UBAP1-201ENST00000297661 OR4X2Q8NGF9 303 aa12.34□□□□□ -0.43
UBAP1-201ENST00000297661 CRYBG3Q68DQ2 2970 aa12.34□□□□□ -0.43
UBAP1-201ENST00000297661 TNFRSF13BO14836 293 aaPredicted RBP12.34□□□□□ -0.43
UBAP1-201ENST00000297661 FAM106CPP0CH98 169 aa12.34□□□□□ -0.43
UBAP1-201ENST00000297661 COL8A1P27658 744 aa12.34□□□□□ -0.43
UBAP1-201ENST00000297661 FAM106AQ4KMX7 169 aa12.34□□□□□ -0.43
UBAP1-201ENST00000297661 TMEM155Q4W5P6 130 aa12.34□□□□□ -0.43
UBAP1-201ENST00000297661 TM4SF20Q53R12 229 aa12.34□□□□□ -0.43
UBAP1-201ENST00000297661 ATP6V0BQ99437 205 aa12.34□□□□□ -0.43
UBAP1-201ENST00000297661 ASCL2Q99929 193 aa12.34□□□□□ -0.43
UBAP1-201ENST00000297661 ANKHD1Q8IWZ3 2542 aaKnown RBP12.34□□□□□ -0.43
UBAP1-201ENST00000297661 FMC1Q96HJ9 113 aa12.33□□□□□ -0.44
UBAP1-201ENST00000297661 MED13LQ71F56 2210 aa12.33□□□□□ -0.44
UBAP1-201ENST00000297661 TMEM189A5PLL7 270 aa12.33□□□□□ -0.44
UBAP1-201ENST00000297661 SHISA9B4DS77 424 aa12.33□□□□□ -0.44
UBAP1-201ENST00000297661 SIVA1O15304 175 aa12.33□□□□□ -0.44
UBAP1-201ENST00000297661 PCP2Q8IVA1 136 aa12.33□□□□□ -0.44
UBAP1-201ENST00000297661 TSSC4Q9Y5U2 329 aaPredicted RBP12.33□□□□□ -0.44
UBAP1-201ENST00000297661 A0A096LNJ9 63 aa12.32□□□□□ -0.44
UBAP1-201ENST00000297661 FBLL1A6NHQ2 334 aaKnown RBP12.32□□□□□ -0.44
UBAP1-201ENST00000297661 LOXL1Q08397 574 aaPredicted RBP12.32□□□□□ -0.44
UBAP1-201ENST00000297661 PSG3Q16557 428 aa12.32□□□□□ -0.44
UBAP1-201ENST00000297661 TMEM133Q9H2Q1 129 aa12.32□□□□□ -0.44
UBAP1-201ENST00000297661 F11RQ9Y624 299 aaKnown RBP12.32□□□□□ -0.44
UBAP1-201ENST00000297661 DOPEY2Q9Y3R5 2298 aa12.32□□□□□ -0.44
UBAP1-201ENST00000297661 GAGE12HA6NDE8 117 aa12.32□□□□□ -0.44
UBAP1-201ENST00000297661 FCGR2BP31994 310 aaPredicted RBP12.32□□□□□ -0.44
UBAP1-201ENST00000297661 NMUP48645 174 aa12.32□□□□□ -0.44
UBAP1-201ENST00000297661 CACNG7P62955 275 aa12.32□□□□□ -0.44
UBAP1-201ENST00000297661 THAP8Q8NA92 274 aa12.32□□□□□ -0.44
UBAP1-201ENST00000297661 NPIPB6E9PJ23 425 aa12.31□□□□□ -0.44
UBAP1-201ENST00000297661 CCL21O00585 134 aa12.31□□□□□ -0.44
UBAP1-201ENST00000297661 LY6HO94772 140 aa12.31□□□□□ -0.44
UBAP1-201ENST00000297661 LGALS9BQ3B8N2 356 aa12.31□□□□□ -0.44
UBAP1-201ENST00000297661 CD300EQ496F6 205 aaPredicted RBP12.31□□□□□ -0.44
UBAP1-201ENST00000297661 LGALS9CQ6DKI2 356 aa12.31□□□□□ -0.44
UBAP1-201ENST00000297661 WFDC12Q8WWY7 111 aa12.31□□□□□ -0.44
UBAP1-201ENST00000297661 TRAV8-1A0A0A6YYK1 113 aa12.31□□□□□ -0.44
UBAP1-201ENST00000297661 A0A1B0GUT8 65 aa12.31□□□□□ -0.44
UBAP1-201ENST00000297661 TCRAP04437 139 aa12.31□□□□□ -0.44
UBAP1-201ENST00000297661 ARMS2P0C7Q2 107 aa12.31□□□□□ -0.44
UBAP1-201ENST00000297661 SMIM13P0DJ93 91 aa12.31□□□□□ -0.44
UBAP1-201ENST00000297661 IFI27P40305 119 aaPredicted RBP12.31□□□□□ -0.44
UBAP1-201ENST00000297661 RPL27AP46776 148 aaKnown RBP12.31□□□□□ -0.44
UBAP1-201ENST00000297661 CIARTQ8N365 385 aaPredicted RBP12.31□□□□□ -0.44
UBAP1-201ENST00000297661 FBXL15Q9H469 300 aa12.31□□□□□ -0.44
UBAP1-201ENST00000297661 CENPEQ02224 2701 aa12.31□□□□□ -0.44
UBAP1-201ENST00000297661 OVOL3O00110 214 aa12.31□□□□□ -0.44
UBAP1-201ENST00000297661 ZNF207O43670 478 aaKnown RBP12.31□□□□□ -0.44
UBAP1-201ENST00000297661 CDSNQ15517 529 aa12.31□□□□□ -0.44
UBAP1-201ENST00000297661 LINC00311Q8N616 119 aa12.31□□□□□ -0.44
UBAP1-201ENST00000297661 STXBP6Q8NFX7 210 aa12.31□□□□□ -0.44
UBAP1-201ENST00000297661 LINC01560Q8TB33 94 aa12.31□□□□□ -0.44
UBAP1-201ENST00000297661 UBR5O95071 2799 aaPredicted RBP12.3□□□□□ -0.44
UBAP1-201ENST00000297661 INS-IGF2F8WCM5 200 aa12.3□□□□□ -0.44
UBAP1-201ENST00000297661 LOC389332A0A1B0GUA5 103 aa12.3□□□□□ -0.44
UBAP1-201ENST00000297661 LYZP61626 148 aa12.3□□□□□ -0.44
UBAP1-201ENST00000297661 S4R3C0 116 aa12.3□□□□□ -0.44
UBAP1-201ENST00000297661 GRNP28799 593 aaKnown RBP12.29□□□□□ -0.44
UBAP1-201ENST00000297661 MC5RP33032 325 aa12.29□□□□□ -0.44
UBAP1-201ENST00000297661 VGLL1Q99990 258 aa12.29□□□□□ -0.44
UBAP1-201ENST00000297661 SIGLEC9Q9Y336 463 aa12.29□□□□□ -0.44
UBAP1-201ENST00000297661 HRNRQ86YZ3 2850 aaPredicted RBP12.29□□□□□ -0.44
UBAP1-201ENST00000297661 GCSHP23434 173 aa12.29□□□□□ -0.44
UBAP1-201ENST00000297661 RAB9AP51151 201 aa12.29□□□□□ -0.44
UBAP1-201ENST00000297661 FXYD7P58549 80 aa12.29□□□□□ -0.44
UBAP1-201ENST00000297661 Q9H3A6 140 aa12.29□□□□□ -0.44
UBAP1-201ENST00000297661 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.28□□□□□ -0.44
UBAP1-201ENST00000297661 FXYD2P54710 66 aa12.28□□□□□ -0.44
UBAP1-201ENST00000297661 RIGQ13278 110 aa12.28□□□□□ -0.44
UBAP1-201ENST00000297661 Q86TA4 180 aa12.28□□□□□ -0.44
UBAP1-201ENST00000297661 EXOC3-AS1Q8N2X6 119 aa12.28□□□□□ -0.44
UBAP1-201ENST00000297661 IGHV1-3A0A0C4DH29 117 aa12.28□□□□□ -0.44
UBAP1-201ENST00000297661 CCDC144NLQ6NUI1 221 aa12.28□□□□□ -0.44
UBAP1-201ENST00000297661 SRSF12Q8WXF0 261 aaKnown RBP12.28□□□□□ -0.44
UBAP1-201ENST00000297661 C18orf15Q96N68 181 aa12.28□□□□□ -0.44
UBAP1-201ENST00000297661 A0A1W2PRD5 423 aa12.27□□□□□ -0.44
UBAP1-201ENST00000297661 A0A1W2PRF3 423 aa12.27□□□□□ -0.44
UBAP1-201ENST00000297661 A0A1W2PRM7 423 aa12.27□□□□□ -0.44
UBAP1-201ENST00000297661 VSTM5A8MXK1 200 aa12.27□□□□□ -0.44
UBAP1-201ENST00000297661 RBP4P02753 201 aa12.27□□□□□ -0.44
UBAP1-201ENST00000297661 SCGB2A2Q13296 93 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms