RNA–Protein interactions for RNA: ENST00000295927.3

PTX3-201, Transcript of pentraxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTX3, Length 1,940 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3-201ENST00000295927 S100PP25815 95 aa17.39■□□□□ 0.37
PTX3-201ENST00000295927 HOXD3P31249 432 aaPredicted RBP17.39■□□□□ 0.37
PTX3-201ENST00000295927 LINC01006Q8NI28 216 aa17.39■□□□□ 0.37
PTX3-201ENST00000295927 JMJD8Q96S16 334 aa17.39■□□□□ 0.37
PTX3-201ENST00000295927 ZNF705FA8MVS1 300 aaPredicted RBP17.38■□□□□ 0.37
PTX3-201ENST00000295927 FLI1Q01543 452 aaPredicted RBP17.38■□□□□ 0.37
PTX3-201ENST00000295927 KHDC1LQ5JSQ8 128 aa17.38■□□□□ 0.37
PTX3-201ENST00000295927 RNF182Q8N6D2 247 aa17.38■□□□□ 0.37
PTX3-201ENST00000295927 C4orf3Q8WVX3 66 aa17.38■□□□□ 0.37
PTX3-201ENST00000295927 PSG8Q9UQ74 426 aa17.38■□□□□ 0.37
PTX3-201ENST00000295927 V9GYV3 84 aa17.38■□□□□ 0.37
PTX3-201ENST00000295927 TRAV8-2A0A0B4J237 113 aa17.37■□□□□ 0.37
PTX3-201ENST00000295927 SERTM2A0A1B0GWG4 89 aa17.37■□□□□ 0.37
PTX3-201ENST00000295927 SYNJ2BPP57105 145 aa17.37■□□□□ 0.37
PTX3-201ENST00000295927 DEFB136Q30KP8 78 aa17.37■□□□□ 0.37
PTX3-201ENST00000295927 IBA57Q5T440 356 aaKnown RBP17.37■□□□□ 0.37
PTX3-201ENST00000295927 LCN12Q6JVE5 192 aa17.37■□□□□ 0.37
PTX3-201ENST00000295927 REC114Q7Z4M0 266 aa17.37■□□□□ 0.37
PTX3-201ENST00000295927 HIVEP1P15822 2718 aa17.37■□□□□ 0.37
PTX3-201ENST00000295927 IGKV2-40A0A087WW87 121 aaPredicted RBP17.37■□□□□ 0.37
PTX3-201ENST00000295927 TMEM213A2RRL7 107 aa17.37■□□□□ 0.37
PTX3-201ENST00000295927 IGKV2D-40P01614 121 aaPredicted RBP17.37■□□□□ 0.37
PTX3-201ENST00000295927 TRBV24-1A0A075B6N3 115 aa17.36■□□□□ 0.37
PTX3-201ENST00000295927 LGALS9O00182 355 aa17.36■□□□□ 0.37
PTX3-201ENST00000295927 FOLR2P14207 255 aa17.36■□□□□ 0.37
PTX3-201ENST00000295927 HIST2H2BDQ6DRA6 164 aa17.36■□□□□ 0.37
PTX3-201ENST00000295927 PRR27Q6MZM9 219 aa17.36■□□□□ 0.37
PTX3-201ENST00000295927 TMEM183AQ8IXX5 376 aa17.36■□□□□ 0.37
PTX3-201ENST00000295927 IMMP2LQ96T52 175 aa17.36■□□□□ 0.37
PTX3-201ENST00000295927 A8MWP6 167 aa17.35■□□□□ 0.37
PTX3-201ENST00000295927 FAM3BP58499 235 aaPredicted RBP17.35■□□□□ 0.37
PTX3-201ENST00000295927 KCNIP4Q6PIL6 250 aa17.35■□□□□ 0.37
PTX3-201ENST00000295927 FAM210BQ96KR6 192 aa17.35■□□□□ 0.37
PTX3-201ENST00000295927 FAM231DQ6ZW35 169 aa17.35■□□□□ 0.37
PTX3-201ENST00000295927 C16orf92Q96LL3 132 aa17.35■□□□□ 0.37
PTX3-201ENST00000295927 ASCL2Q99929 193 aa17.35■□□□□ 0.37
PTX3-201ENST00000295927 PYGO2Q9BRQ0 406 aa17.35■□□□□ 0.37
PTX3-201ENST00000295927 FLNBO75369 2602 aaKnown RBP17.34■□□□□ 0.37
PTX3-201ENST00000295927 RPL11P62913 178 aaKnown RBP17.34■□□□□ 0.37
PTX3-201ENST00000295927 FOXL1Q12952 345 aa17.34■□□□□ 0.37
PTX3-201ENST00000295927 C1QL4Q86Z23 238 aa17.34■□□□□ 0.37
PTX3-201ENST00000295927 KLHL30-AS1Q8NEE0 82 aa17.34■□□□□ 0.37
PTX3-201ENST00000295927 IL36BQ9NZH7 164 aa17.34■□□□□ 0.37
PTX3-201ENST00000295927 ZFP30Q9Y2G7 519 aa17.34■□□□□ 0.37
PTX3-201ENST00000295927 SELENOKQ9Y6D0 94 aa17.34■□□□□ 0.37
PTX3-201ENST00000295927 A0A1W2PPQ1 181 aa17.33■□□□□ 0.37
PTX3-201ENST00000295927 PRAC2D3DTV9 90 aa17.33■□□□□ 0.37
PTX3-201ENST00000295927 LINC01619G3V211 115 aa17.33■□□□□ 0.37
PTX3-201ENST00000295927 SLURP1P55000 103 aa17.33■□□□□ 0.37
PTX3-201ENST00000295927 KLF5Q13887 457 aaPredicted RBP17.33■□□□□ 0.37
PTX3-201ENST00000295927 NUDT10Q8NFP7 164 aa17.33■□□□□ 0.37
PTX3-201ENST00000295927 OR11H1Q8NG94 326 aa17.33■□□□□ 0.37
PTX3-201ENST00000295927 NUDT11Q96G61 164 aa17.33■□□□□ 0.37
PTX3-201ENST00000295927 NDUFA7O95182 113 aa17.33■□□□□ 0.36
PTX3-201ENST00000295927 RPS10P46783 165 aaKnown RBP17.33■□□□□ 0.36
PTX3-201ENST00000295927 C11orf44Q8N8P7 122 aa17.33■□□□□ 0.36
PTX3-201ENST00000295927 NRN1Q9NPD7 142 aa17.33■□□□□ 0.36
PTX3-201ENST00000295927 CD28P10747 220 aa17.32■□□□□ 0.36
PTX3-201ENST00000295927 BMI1P35226 326 aa17.32■□□□□ 0.36
PTX3-201ENST00000295927 LINC00322Q6ZN03 302 aaPredicted RBP17.32■□□□□ 0.36
PTX3-201ENST00000295927 TCF24Q7RTU0 167 aa17.32■□□□□ 0.36
PTX3-201ENST00000295927 OR1N2Q8NGR9 330 aa17.32■□□□□ 0.36
PTX3-201ENST00000295927 WFDC12Q8WWY7 111 aa17.32■□□□□ 0.36
PTX3-201ENST00000295927 DPF1Q92782 380 aa17.32■□□□□ 0.36
PTX3-201ENST00000295927 MRPL53Q96EL3 112 aaKnown RBP17.32■□□□□ 0.36
PTX3-201ENST00000295927 VGLL1Q99990 258 aa17.32■□□□□ 0.36
PTX3-201ENST00000295927 BIN3Q9NQY0 253 aa17.32■□□□□ 0.36
PTX3-201ENST00000295927 NSD1Q96L73 2696 aaPredicted RBP17.32■□□□□ 0.36
PTX3-201ENST00000295927 ZNF705GA8MUZ8 300 aaPredicted RBP17.31■□□□□ 0.36
PTX3-201ENST00000295927 SOCS3O14543 225 aa17.31■□□□□ 0.36
PTX3-201ENST00000295927 DUX3Q96PT4 197 aa17.31■□□□□ 0.36
PTX3-201ENST00000295927 CLEC5AQ9NY25 188 aa17.31■□□□□ 0.36
PTX3-201ENST00000295927 IGKV3-7A0A075B6H7 116 aa17.31■□□□□ 0.36
PTX3-201ENST00000295927 HAX1O00165 279 aa17.31■□□□□ 0.36
PTX3-201ENST00000295927 GATCO43716 136 aaKnown RBP17.31■□□□□ 0.36
PTX3-201ENST00000295927 ZNF492Q9P255 531 aa17.31■□□□□ 0.36
PTX3-201ENST00000295927 MLXQ9UH92 298 aa17.31■□□□□ 0.36
PTX3-201ENST00000295927 FBLL1A6NHQ2 334 aaKnown RBP17.3■□□□□ 0.36
PTX3-201ENST00000295927 ZC2HC1AQ96GY0 325 aa17.3■□□□□ 0.36
PTX3-201ENST00000295927 C19orf71A6NCJ1 209 aa17.29■□□□□ 0.36
PTX3-201ENST00000295927 C2orf70A6NJV1 201 aa17.29■□□□□ 0.36
PTX3-201ENST00000295927 C20orf173Q96LM9 149 aa17.29■□□□□ 0.36
PTX3-201ENST00000295927 RBAKDNA6NC62 111 aa17.29■□□□□ 0.36
PTX3-201ENST00000295927 TCF21O43680 179 aa17.29■□□□□ 0.36
PTX3-201ENST00000295927 CBLN1P23435 193 aa17.29■□□□□ 0.36
PTX3-201ENST00000295927 ERCC8Q13216 396 aa17.29■□□□□ 0.36
PTX3-201ENST00000295927 C8orf49Q96NF6 230 aa17.29■□□□□ 0.36
PTX3-201ENST00000295927 C1orf196B1AJZ1 125 aa17.28■□□□□ 0.36
PTX3-201ENST00000295927 CA1P00915 261 aaPredicted RBP17.28■□□□□ 0.36
PTX3-201ENST00000295927 GBGT1Q8N5D6 347 aa17.28■□□□□ 0.36
PTX3-201ENST00000295927 Q8TAT8 98 aa17.28■□□□□ 0.36
PTX3-201ENST00000295927 RNF114Q9Y508 228 aa17.28■□□□□ 0.36
PTX3-201ENST00000295927 PRR25Q96S07 402 aa17.27■□□□□ 0.36
PTX3-201ENST00000295927 CITED2Q99967 270 aaPredicted RBP17.27■□□□□ 0.36
PTX3-201ENST00000295927 FN1P02751 2386 aaKnown RBP17.27■□□□□ 0.36
PTX3-201ENST00000295927 A0A1W2PRX2 142 aa17.27■□□□□ 0.35
PTX3-201ENST00000295927 CRLF1O75462 422 aa17.27■□□□□ 0.35
PTX3-201ENST00000295927 ZFP82Q8N141 532 aa17.27■□□□□ 0.35
PTX3-201ENST00000295927 DAZAP1Q96EP5 407 aaKnown RBP17.27■□□□□ 0.35
PTX3-201ENST00000295927 SRSF2Q01130 221 aaKnown RBP17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms