RNA–Protein interactions for RNA: ENST00000294129.6

NCKIPSD-201, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-201ENST00000294129 CRIP1P50238 77 aa12.34□□□□□ -0.43
NCKIPSD-201ENST00000294129 PIP4P2Q8N4L2 257 aa12.34□□□□□ -0.43
NCKIPSD-201ENST00000294129 GAGE1Q13065 139 aa12.33□□□□□ -0.43
NCKIPSD-201ENST00000294129 C1RLQ9NZP8 487 aa12.33□□□□□ -0.43
NCKIPSD-201ENST00000294129 H0Y8G0 127 aa12.33□□□□□ -0.44
NCKIPSD-201ENST00000294129 CLEC3BP05452 202 aa12.33□□□□□ -0.44
NCKIPSD-201ENST00000294129 CT45A10P0DMU9 189 aa12.33□□□□□ -0.44
NCKIPSD-201ENST00000294129 CSN1S1P47710 185 aa12.33□□□□□ -0.44
NCKIPSD-201ENST00000294129 LMO4P61968 165 aa12.33□□□□□ -0.44
NCKIPSD-201ENST00000294129 RHOGP84095 191 aa12.33□□□□□ -0.44
NCKIPSD-201ENST00000294129 CT83Q5H943 113 aa12.33□□□□□ -0.44
NCKIPSD-201ENST00000294129 STPG4Q8N801 248 aa12.33□□□□□ -0.44
NCKIPSD-201ENST00000294129 TMEM75Q8N9X5 138 aa12.33□□□□□ -0.44
NCKIPSD-201ENST00000294129 RNF24Q9Y225 148 aa12.33□□□□□ -0.44
NCKIPSD-201ENST00000294129 POLQO75417 2590 aa12.33□□□□□ -0.44
NCKIPSD-201ENST00000294129 IGLC3P0DOY3 106 aa12.33□□□□□ -0.44
NCKIPSD-201ENST00000294129 BRD3OSQ6XYD6 125 aa12.33□□□□□ -0.44
NCKIPSD-201ENST00000294129 RABAC1Q9UI14 185 aa12.33□□□□□ -0.44
NCKIPSD-201ENST00000294129 CSMD2Q7Z408 3487 aa12.32□□□□□ -0.44
NCKIPSD-201ENST00000294129 USP9YO00507 2555 aaPredicted RBP12.32□□□□□ -0.44
NCKIPSD-201ENST00000294129 FAM181BA6NEQ2 426 aa12.32□□□□□ -0.44
NCKIPSD-201ENST00000294129 UBE2E1P51965 193 aa12.32□□□□□ -0.44
NCKIPSD-201ENST00000294129 EBLN2Q6P2I7 272 aa12.32□□□□□ -0.44
NCKIPSD-201ENST00000294129 URB1-AS1Q96HZ7 61 aa12.32□□□□□ -0.44
NCKIPSD-201ENST00000294129 UQCR10Q9UDW1 63 aa12.32□□□□□ -0.44
NCKIPSD-201ENST00000294129 CLEC19AQ6UXS0 136 aa12.32□□□□□ -0.44
NCKIPSD-201ENST00000294129 IGSF10Q6WRI0 2623 aa12.32□□□□□ -0.44
NCKIPSD-201ENST00000294129 NPIPB6E9PJ23 425 aa12.31□□□□□ -0.44
NCKIPSD-201ENST00000294129 HNRNPA3P51991 378 aaKnown RBP12.31□□□□□ -0.44
NCKIPSD-201ENST00000294129 ZFP30Q9Y2G7 519 aa12.31□□□□□ -0.44
NCKIPSD-201ENST00000294129 A0A1B0GUT8 65 aa12.31□□□□□ -0.44
NCKIPSD-201ENST00000294129 OOSP1A8MZH6 123 aa12.31□□□□□ -0.44
NCKIPSD-201ENST00000294129 TCF21O43680 179 aa12.31□□□□□ -0.44
NCKIPSD-201ENST00000294129 LINC00173Q6ZV60 143 aa12.31□□□□□ -0.44
NCKIPSD-201ENST00000294129 SERTM2A0A1B0GWG4 89 aa12.3□□□□□ -0.44
NCKIPSD-201ENST00000294129 RPL7P18124 248 aaKnown RBP12.3□□□□□ -0.44
NCKIPSD-201ENST00000294129 RELQ04864 619 aaPredicted RBP12.3□□□□□ -0.44
NCKIPSD-201ENST00000294129 KLF5Q13887 457 aaPredicted RBP12.3□□□□□ -0.44
NCKIPSD-201ENST00000294129 EBI3Q14213 229 aa12.3□□□□□ -0.44
NCKIPSD-201ENST00000294129 AJUBAQ96IF1 538 aa12.3□□□□□ -0.44
NCKIPSD-201ENST00000294129 MCRIP2Q9BUT9 160 aaKnown RBP12.3□□□□□ -0.44
NCKIPSD-201ENST00000294129 LOC102724200A0A096LPH7 203 aaPredicted RBP12.3□□□□□ -0.44
NCKIPSD-201ENST00000294129 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.3□□□□□ -0.44
NCKIPSD-201ENST00000294129 NPFFO15130 113 aa12.3□□□□□ -0.44
NCKIPSD-201ENST00000294129 Q6ZVH6 145 aa12.3□□□□□ -0.44
NCKIPSD-201ENST00000294129 VGLL1Q99990 258 aa12.3□□□□□ -0.44
NCKIPSD-201ENST00000294129 GFRA4Q9GZZ7 299 aa12.3□□□□□ -0.44
NCKIPSD-201ENST00000294129 PRORYQ9H606 182 aa12.3□□□□□ -0.44
NCKIPSD-201ENST00000294129 LAMTOR2Q9Y2Q5 125 aa12.3□□□□□ -0.44
NCKIPSD-201ENST00000294129 IGHV4-39P01824 125 aa12.3□□□□□ -0.44
NCKIPSD-201ENST00000294129 S100A7AQ86SG5 101 aa12.3□□□□□ -0.44
NCKIPSD-201ENST00000294129 LYPD1Q8N2G4 141 aa12.3□□□□□ -0.44
NCKIPSD-201ENST00000294129 RNF182Q8N6D2 247 aa12.3□□□□□ -0.44
NCKIPSD-201ENST00000294129 SMAD5-AS1Q9Y6J3 95 aa12.29□□□□□ -0.44
NCKIPSD-201ENST00000294129 LINC00614P0C842 121 aa12.29□□□□□ -0.44
NCKIPSD-201ENST00000294129 SOX21Q9Y651 276 aaPredicted RBP12.29□□□□□ -0.44
NCKIPSD-201ENST00000294129 CENPVL3A0A0U1RRI6 287 aa12.28□□□□□ -0.44
NCKIPSD-201ENST00000294129 HINT1P49773 126 aaPredicted RBP12.28□□□□□ -0.44
NCKIPSD-201ENST00000294129 SPATA12Q7Z6I5 190 aa12.28□□□□□ -0.44
NCKIPSD-201ENST00000294129 DOPEY2Q9Y3R5 2298 aa12.28□□□□□ -0.44
NCKIPSD-201ENST00000294129 SH2D1AO60880 128 aa12.28□□□□□ -0.44
NCKIPSD-201ENST00000294129 SCGB2A1O75556 95 aa12.28□□□□□ -0.44
NCKIPSD-201ENST00000294129 APOHP02749 345 aaPredicted RBP12.28□□□□□ -0.44
NCKIPSD-201ENST00000294129 TRAV40A0A0B4J280 105 aa12.27□□□□□ -0.44
NCKIPSD-201ENST00000294129 IGHV1-24A0A0C4DH33 117 aa12.27□□□□□ -0.44
NCKIPSD-201ENST00000294129 TMEM213A2RRL7 107 aa12.27□□□□□ -0.44
NCKIPSD-201ENST00000294129 TMEM189A5PLL7 270 aa12.27□□□□□ -0.44
NCKIPSD-201ENST00000294129 ERCC8Q13216 396 aa12.27□□□□□ -0.44
NCKIPSD-201ENST00000294129 HAX1O00165 279 aa12.27□□□□□ -0.45
NCKIPSD-201ENST00000294129 PSG9Q00887 426 aa12.27□□□□□ -0.45
NCKIPSD-201ENST00000294129 RIGQ13278 110 aa12.27□□□□□ -0.45
NCKIPSD-201ENST00000294129 PDE6HQ13956 83 aa12.27□□□□□ -0.45
NCKIPSD-201ENST00000294129 LY6EQ16553 131 aa12.27□□□□□ -0.45
NCKIPSD-201ENST00000294129 C21orf62-AS1Q17RA5 79 aa12.27□□□□□ -0.45
NCKIPSD-201ENST00000294129 LYZL1Q6UWQ5 148 aa12.27□□□□□ -0.45
NCKIPSD-201ENST00000294129 LOC389332A0A1B0GUA5 103 aa12.27□□□□□ -0.45
NCKIPSD-201ENST00000294129 SFTPCP11686 197 aa12.27□□□□□ -0.45
NCKIPSD-201ENST00000294129 FAM110DQ8TAY7 271 aaPredicted RBP12.27□□□□□ -0.45
NCKIPSD-201ENST00000294129 DOPEY1Q5JWR5 2465 aa12.26□□□□□ -0.45
NCKIPSD-201ENST00000294129 KLHDC1Q8N7A1 406 aa12.26□□□□□ -0.45
NCKIPSD-201ENST00000294129 ZNF502Q8TBZ5 544 aa12.26□□□□□ -0.45
NCKIPSD-201ENST00000294129 ZNF48Q96MX3 618 aaPredicted RBP12.26□□□□□ -0.45
NCKIPSD-201ENST00000294129 FAM231BA6NCW3 169 aa12.26□□□□□ -0.45
NCKIPSD-201ENST00000294129 PRAC2D3DTV9 90 aa12.26□□□□□ -0.45
NCKIPSD-201ENST00000294129 ZNF80P51504 273 aaPredicted RBP12.26□□□□□ -0.45
NCKIPSD-201ENST00000294129 PMCHL2Q9BQD1 86 aa12.26□□□□□ -0.45
NCKIPSD-201ENST00000294129 TP73-AS1Q9UF72 201 aa12.26□□□□□ -0.45
NCKIPSD-201ENST00000294129 IGHV4-61A0A0C4DH41 118 aa12.25□□□□□ -0.45
NCKIPSD-201ENST00000294129 C2orf70A6NJV1 201 aa12.25□□□□□ -0.45
NCKIPSD-201ENST00000294129 TSPOP30536 169 aa12.25□□□□□ -0.45
NCKIPSD-201ENST00000294129 CCDC140Q96MF4 163 aa12.25□□□□□ -0.45
NCKIPSD-201ENST00000294129 SELENOKQ9Y6D0 94 aa12.25□□□□□ -0.45
NCKIPSD-201ENST00000294129 LRRK2Q5S007 2527 aa12.25□□□□□ -0.45
NCKIPSD-201ENST00000294129 LEPROTL1O95214 131 aa12.25□□□□□ -0.45
NCKIPSD-201ENST00000294129 FAM162BQ5T6X4 162 aa12.25□□□□□ -0.45
NCKIPSD-201ENST00000294129 PRR25Q96S07 402 aa12.25□□□□□ -0.45
NCKIPSD-201ENST00000294129 OVOL3O00110 214 aa12.24□□□□□ -0.45
NCKIPSD-201ENST00000294129 ORM1P02763 201 aa12.24□□□□□ -0.45
NCKIPSD-201ENST00000294129 PPP1R14DQ9NXH3 145 aa12.24□□□□□ -0.45
NCKIPSD-201ENST00000294129 C16orf54Q6UWD8 224 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 121.3 ms