RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 KRTAP27-1Q3LI81 207 aa10.24□□□□□ -0.77
PTCD1-201ENST00000292478 VGLL1Q99990 258 aa10.24□□□□□ -0.77
PTCD1-201ENST00000292478 TRAV8-4A0A0B4J246 113 aa10.24□□□□□ -0.77
PTCD1-201ENST00000292478 NBL1P41271 181 aa10.24□□□□□ -0.77
PTCD1-201ENST00000292478 OVOL2Q9BRP0 275 aa10.24□□□□□ -0.77
PTCD1-201ENST00000292478 ABCA1O95477 2261 aa10.24□□□□□ -0.77
PTCD1-201ENST00000292478 MPDZO75970 2070 aa10.24□□□□□ -0.77
PTCD1-201ENST00000292478 SMIM27A0A1W2PRY6 76 aa10.24□□□□□ -0.77
PTCD1-201ENST00000292478 GGTLC3B5MD39 225 aa10.24□□□□□ -0.77
PTCD1-201ENST00000292478 DKK1O94907 266 aa10.24□□□□□ -0.77
PTCD1-201ENST00000292478 SP5Q6BEB4 398 aaPredicted RBP10.24□□□□□ -0.77
PTCD1-201ENST00000292478 DMRTC2Q8IXT2 367 aaPredicted RBP10.24□□□□□ -0.77
PTCD1-201ENST00000292478 LY6G5BQ8NDX9 201 aa10.24□□□□□ -0.77
PTCD1-201ENST00000292478 C18orf32Q8TCD1 76 aa10.24□□□□□ -0.77
PTCD1-201ENST00000292478 TMEM141Q96I45 108 aa10.24□□□□□ -0.77
PTCD1-201ENST00000292478 C20orf144Q9BQM9 153 aa10.24□□□□□ -0.77
PTCD1-201ENST00000292478 MEGF9Q9H1U4 602 aa10.24□□□□□ -0.77
PTCD1-201ENST00000292478 MYMXA0A1B0GTQ4 84 aa10.24□□□□□ -0.77
PTCD1-201ENST00000292478 IGFL2Q6UWQ7 119 aa10.24□□□□□ -0.77
PTCD1-201ENST00000292478 WIPF3A6NGB9 483 aa10.23□□□□□ -0.77
PTCD1-201ENST00000292478 WT1-ASQ06250 92 aa10.23□□□□□ -0.77
PTCD1-201ENST00000292478 Q8N8P6 123 aa10.23□□□□□ -0.77
PTCD1-201ENST00000292478 ZC2HC1BQ5TFG8 222 aa10.23□□□□□ -0.77
PTCD1-201ENST00000292478 V9GYV3 84 aa10.23□□□□□ -0.77
PTCD1-201ENST00000292478 ZNF134P52741 427 aa10.23□□□□□ -0.77
PTCD1-201ENST00000292478 SYNJ2BPP57105 145 aa10.23□□□□□ -0.77
PTCD1-201ENST00000292478 RUSC1-AS1Q66K80 236 aa10.23□□□□□ -0.77
PTCD1-201ENST00000292478 ZNF664Q8N3J9 261 aa10.23□□□□□ -0.77
PTCD1-201ENST00000292478 LINC01619G3V211 115 aa10.23□□□□□ -0.77
PTCD1-201ENST00000292478 H3BUA1 57 aa10.23□□□□□ -0.77
PTCD1-201ENST00000292478 K7EM74 188 aa10.23□□□□□ -0.77
PTCD1-201ENST00000292478 CD5LO43866 347 aa10.23□□□□□ -0.77
PTCD1-201ENST00000292478 DLEU1O43261 78 aa10.23□□□□□ -0.77
PTCD1-201ENST00000292478 PHF3Q92576 2039 aaKnown RBP10.23□□□□□ -0.77
PTCD1-201ENST00000292478 MED12Q93074 2177 aa10.22□□□□□ -0.77
PTCD1-201ENST00000292478 IGHV3-73A0A0B4J1V6 119 aa10.22□□□□□ -0.77
PTCD1-201ENST00000292478 DUX4L9Q6RFH8 374 aaPredicted RBP10.22□□□□□ -0.77
PTCD1-201ENST00000292478 IGHV3-64A0A075B6Q5 118 aa10.22□□□□□ -0.77
PTCD1-201ENST00000292478 PRB4P10163 310 aaPredicted RBP10.22□□□□□ -0.77
PTCD1-201ENST00000292478 HAPLN4Q86UW8 402 aa10.22□□□□□ -0.77
PTCD1-201ENST00000292478 SIGMAR1Q99720 223 aa10.22□□□□□ -0.77
PTCD1-201ENST00000292478 C11orf68Q9H3H3 251 aaKnown RBP10.22□□□□□ -0.77
PTCD1-201ENST00000292478 A8MWP6 167 aa10.22□□□□□ -0.77
PTCD1-201ENST00000292478 SMKR1H3BMG3 65 aa10.22□□□□□ -0.77
PTCD1-201ENST00000292478 S100A7L2Q5SY68 101 aa10.22□□□□□ -0.77
PTCD1-201ENST00000292478 PRR25Q96S07 402 aa10.22□□□□□ -0.77
PTCD1-201ENST00000292478 DEFB131AP59861 70 aa10.21□□□□□ -0.77
PTCD1-201ENST00000292478 PRR20EP86478 221 aa10.21□□□□□ -0.77
PTCD1-201ENST00000292478 PRR20CP86479 221 aa10.21□□□□□ -0.77
PTCD1-201ENST00000292478 PRR20DP86480 221 aa10.21□□□□□ -0.77
PTCD1-201ENST00000292478 PRR20BP86481 221 aa10.21□□□□□ -0.77
PTCD1-201ENST00000292478 PRR20AP86496 221 aa10.21□□□□□ -0.77
PTCD1-201ENST00000292478 VWC2Q2TAL6 325 aa10.21□□□□□ -0.77
PTCD1-201ENST00000292478 UBE2DNLQ8IWF7 75 aa10.21□□□□□ -0.77
PTCD1-201ENST00000292478 MPV17L2Q567V2 206 aa10.21□□□□□ -0.78
PTCD1-201ENST00000292478 CYYR1Q96J86 154 aa10.21□□□□□ -0.78
PTCD1-201ENST00000292478 C8orf49Q96NF6 230 aa10.21□□□□□ -0.78
PTCD1-201ENST00000292478 TIMM21Q9BVV7 248 aa10.21□□□□□ -0.78
PTCD1-201ENST00000292478 GVINP1Q7Z2Y8 2422 aa10.21□□□□□ -0.78
PTCD1-201ENST00000292478 TMEM95Q3KNT9 176 aa10.21□□□□□ -0.78
PTCD1-201ENST00000292478 SFTA2Q6UW10 78 aa10.21□□□□□ -0.78
PTCD1-201ENST00000292478 C8orf86Q6ZUL3 223 aa10.21□□□□□ -0.78
PTCD1-201ENST00000292478 LYPD6BQ8NI32 183 aa10.21□□□□□ -0.78
PTCD1-201ENST00000292478 IGLC1P0CG04 106 aa10.2□□□□□ -0.78
PTCD1-201ENST00000292478 FXYD7P58549 80 aa10.2□□□□□ -0.78
PTCD1-201ENST00000292478 DLX4Q92988 240 aaPredicted RBP10.2□□□□□ -0.78
PTCD1-201ENST00000292478 A0A087X0K7 114 aa10.2□□□□□ -0.78
PTCD1-201ENST00000292478 SRSF2Q01130 221 aaKnown RBP10.2□□□□□ -0.78
PTCD1-201ENST00000292478 HELZP42694 1942 aaKnown RBP10.2□□□□□ -0.78
PTCD1-201ENST00000292478 RPL35AP18077 110 aaKnown RBP10.2□□□□□ -0.78
PTCD1-201ENST00000292478 NEGR1Q7Z3B1 354 aa10.2□□□□□ -0.78
PTCD1-201ENST00000292478 A0A087WWL8 130 aa10.2□□□□□ -0.78
PTCD1-201ENST00000292478 TMEM213A2RRL7 107 aa10.2□□□□□ -0.78
PTCD1-201ENST00000292478 RNF223E7ERA6 249 aa10.2□□□□□ -0.78
PTCD1-201ENST00000292478 CDK2AP2O75956 126 aa10.2□□□□□ -0.78
PTCD1-201ENST00000292478 C11orf53Q8IXP5 236 aa10.2□□□□□ -0.78
PTCD1-201ENST00000292478 CHAC1Q9BUX1 264 aa10.2□□□□□ -0.78
PTCD1-201ENST00000292478 FXYD5Q96DB9 178 aa10.2□□□□□ -0.78
PTCD1-201ENST00000292478 ESDP10768 282 aa10.19□□□□□ -0.78
PTCD1-201ENST00000292478 PI4KAP42356 2102 aa10.19□□□□□ -0.78
PTCD1-201ENST00000292478 Q5PR19 223 aa10.19□□□□□ -0.78
PTCD1-201ENST00000292478 MMP23AO75900 390 aa10.19□□□□□ -0.78
PTCD1-201ENST00000292478 KIR3DS1Q14943 382 aa10.19□□□□□ -0.78
PTCD1-201ENST00000292478 PHLDA1Q8WV24 401 aaPredicted RBP10.19□□□□□ -0.78
PTCD1-201ENST00000292478 G3V318 75 aa10.19□□□□□ -0.78
PTCD1-201ENST00000292478 SS18Q15532 418 aa10.19□□□□□ -0.78
PTCD1-201ENST00000292478 IGHV1OR15-1A0A075B7D0 117 aa10.18□□□□□ -0.78
PTCD1-201ENST00000292478 LEPROTO15243 131 aa10.18□□□□□ -0.78
PTCD1-201ENST00000292478 UBE2V1Q13404 147 aa10.18□□□□□ -0.78
PTCD1-201ENST00000292478 SLX1AQ9BQ83 275 aa10.18□□□□□ -0.78
PTCD1-201ENST00000292478 POLR3KQ9Y2Y1 108 aaPredicted RBP10.18□□□□□ -0.78
PTCD1-201ENST00000292478 SELENOKQ9Y6D0 94 aa10.18□□□□□ -0.78
PTCD1-201ENST00000292478 UBE2E2Q96LR5 201 aa10.18□□□□□ -0.78
PTCD1-201ENST00000292478 JPT2Q9H910 190 aa10.18□□□□□ -0.78
PTCD1-201ENST00000292478 I3L3M4 83 aa10.18□□□□□ -0.78
PTCD1-201ENST00000292478 LHBP01229 141 aa10.18□□□□□ -0.78
PTCD1-201ENST00000292478 IGHV2-70P01814 119 aa10.18□□□□□ -0.78
PTCD1-201ENST00000292478 PRR31Q5SQ13 230 aa10.18□□□□□ -0.78
PTCD1-201ENST00000292478 PAX4O43316 350 aa10.18□□□□□ -0.78
PTCD1-201ENST00000292478 C1orf159Q96HA4 380 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 218.2 ms