RNA–Protein interactions for RNA: ENST00000291547.9

PKNOX1-201, Transcript of PBX/knotted 1 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKNOX1, Length 5,003 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-201ENST00000291547 TRBV20-1A0A075B6N2 111 aa8.74□□□□□ -1.01
PKNOX1-201ENST00000291547 IGKV1-27A0A075B6S5 117 aa8.74□□□□□ -1.01
PKNOX1-201ENST00000291547 IGHV1-18A0A0C4DH31 117 aa8.74□□□□□ -1.01
PKNOX1-201ENST00000291547 MRAPQ8TCY5 172 aa8.74□□□□□ -1.01
PKNOX1-201ENST00000291547 PI4KAP42356 2102 aa8.74□□□□□ -1.01
PKNOX1-201ENST00000291547 F8W1H4 67 aa8.74□□□□□ -1.01
PKNOX1-201ENST00000291547 ARMS2P0C7Q2 107 aa8.74□□□□□ -1.01
PKNOX1-201ENST00000291547 CD59P13987 128 aa8.74□□□□□ -1.01
PKNOX1-201ENST00000291547 CRYBA4P53673 196 aa8.74□□□□□ -1.01
PKNOX1-201ENST00000291547 TCF15Q12870 199 aa8.74□□□□□ -1.01
PKNOX1-201ENST00000291547 BVES-AS1Q5T3Y7 98 aa8.74□□□□□ -1.01
PKNOX1-201ENST00000291547 SUMO4Q6EEV6 95 aa8.74□□□□□ -1.01
PKNOX1-201ENST00000291547 C5orf24Q7Z6I8 188 aa8.74□□□□□ -1.01
PKNOX1-201ENST00000291547 RIF1Q5UIP0 2472 aaKnown RBP8.74□□□□□ -1.01
PKNOX1-201ENST00000291547 RNASE6Q93091 150 aaKnown RBP8.74□□□□□ -1.01
PKNOX1-201ENST00000291547 LRRK1Q38SD2 2015 aa8.74□□□□□ -1.01
PKNOX1-201ENST00000291547 FREM3P0C091 2139 aa8.73□□□□□ -1.01
PKNOX1-201ENST00000291547 THBDP07204 575 aa8.73□□□□□ -1.01
PKNOX1-201ENST00000291547 FOXG1P55316 489 aaPredicted RBP8.73□□□□□ -1.01
PKNOX1-201ENST00000291547 MORN5Q5VZ52 161 aa8.73□□□□□ -1.01
PKNOX1-201ENST00000291547 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.73□□□□□ -1.015e-6■□□□□ 9.9
PKNOX1-201ENST00000291547 C15orf62A8K5M9 175 aa8.73□□□□□ -1.01
PKNOX1-201ENST00000291547 NTN3O00634 580 aaPredicted RBP8.73□□□□□ -1.01
PKNOX1-201ENST00000291547 HAMPP81172 84 aa8.73□□□□□ -1.01
PKNOX1-201ENST00000291547 TMEM219Q86XT9 240 aa8.73□□□□□ -1.01
PKNOX1-201ENST00000291547 LYPD1Q8N2G4 141 aa8.73□□□□□ -1.01
PKNOX1-201ENST00000291547 ZNF114Q8NC26 417 aa8.73□□□□□ -1.01
PKNOX1-201ENST00000291547 C18orf32Q8TCD1 76 aa8.73□□□□□ -1.01
PKNOX1-201ENST00000291547 ZFP36L1Q07352 338 aaKnown RBP8.73□□□□□ -1.01
PKNOX1-201ENST00000291547 SPANXDQ9BXN6 97 aa8.73□□□□□ -1.01
PKNOX1-201ENST00000291547 IGLV3-32A0A0A0MS00 114 aa8.73□□□□□ -1.01
PKNOX1-201ENST00000291547 IGHV1-3A0A0C4DH29 117 aa8.73□□□□□ -1.01
PKNOX1-201ENST00000291547 CT83Q5H943 113 aa8.73□□□□□ -1.01
PKNOX1-201ENST00000291547 IGLV3-12A0A075B6K2 115 aa8.72□□□□□ -1.01
PKNOX1-201ENST00000291547 IGHV1-8P0DP01 117 aa8.72□□□□□ -1.01
PKNOX1-201ENST00000291547 SLC25A16P16260 332 aa8.72□□□□□ -1.01
PKNOX1-201ENST00000291547 Q86TA4 180 aa8.72□□□□□ -1.01
PKNOX1-201ENST00000291547 DTX1Q86Y01 620 aa8.72□□□□□ -1.01
PKNOX1-201ENST00000291547 LINC00473A8K010 186 aa8.72□□□□□ -1.01
PKNOX1-201ENST00000291547 UBL5Q9BZL1 73 aa8.72□□□□□ -1.01
PKNOX1-201ENST00000291547 IL15RAQ13261 267 aa8.72□□□□□ -1.01
PKNOX1-201ENST00000291547 RBMY1FQ15415 496 aaKnown RBP8.72□□□□□ -1.01
PKNOX1-201ENST00000291547 HAPLN4Q86UW8 402 aa8.72□□□□□ -1.01
PKNOX1-201ENST00000291547 KIAA2026Q5HYC2 2103 aa8.72□□□□□ -1.01
PKNOX1-201ENST00000291547 TMEM200BQ69YZ2 307 aa8.72□□□□□ -1.01
PKNOX1-201ENST00000291547 COL6A6A6NMZ7 2263 aa8.71□□□□□ -1.01
PKNOX1-201ENST00000291547 SAP30O75446 220 aa8.71□□□□□ -1.01
PKNOX1-201ENST00000291547 MLANAQ16655 118 aa8.71□□□□□ -1.01
PKNOX1-201ENST00000291547 ZNF329Q86UD4 541 aa8.71□□□□□ -1.01
PKNOX1-201ENST00000291547 GPR179Q6PRD1 2367 aa8.71□□□□□ -1.01
PKNOX1-201ENST00000291547 TRAV26-1A0A087WT03 109 aa8.71□□□□□ -1.02
PKNOX1-201ENST00000291547 A0A0G2JRQ6 117 aa8.71□□□□□ -1.02
PKNOX1-201ENST00000291547 IFITM1P13164 125 aa8.71□□□□□ -1.02
PKNOX1-201ENST00000291547 FANCMQ8IYD8 2048 aa8.71□□□□□ -1.02
PKNOX1-201ENST00000291547 TMEM213A2RRL7 107 aa8.71□□□□□ -1.02
PKNOX1-201ENST00000291547 C2orf66Q6UXQ4 117 aa8.71□□□□□ -1.02
PKNOX1-201ENST00000291547 UBE2E2Q96LR5 201 aa8.71□□□□□ -1.02
PKNOX1-201ENST00000291547 TP53BP1Q12888 1972 aaPredicted RBP8.71□□□□□ -1.02
PKNOX1-201ENST00000291547 LOC102723996A0A087X1L8 192 aa8.71□□□□□ -1.02
PKNOX1-201ENST00000291547 CMC4P56277 68 aaPredicted RBP8.71□□□□□ -1.02
PKNOX1-201ENST00000291547 LINC00205P59089 165 aa8.71□□□□□ -1.02
PKNOX1-201ENST00000291547 PMVKQ15126 192 aa8.71□□□□□ -1.02
PKNOX1-201ENST00000291547 C5orf64Q2M2E5 130 aa8.71□□□□□ -1.02
PKNOX1-201ENST00000291547 NSUN5P1Q3KNT7 163 aa8.71□□□□□ -1.02
PKNOX1-201ENST00000291547 Q6ZRM9 215 aa8.71□□□□□ -1.02
PKNOX1-201ENST00000291547 METRNQ9UJH8 293 aa8.71□□□□□ -1.02
PKNOX1-201ENST00000291547 TP53TG1Q9Y2A0 90 aa8.71□□□□□ -1.02
PKNOX1-201ENST00000291547 CSRP1P21291 193 aaKnown RBP8.7□□□□□ -1.02
PKNOX1-201ENST00000291547 CFHR2P36980 270 aa8.7□□□□□ -1.02
PKNOX1-201ENST00000291547 SS18Q15532 418 aa8.7□□□□□ -1.02
PKNOX1-201ENST00000291547 CD177Q8N6Q3 437 aa8.7□□□□□ -1.02
PKNOX1-201ENST00000291547 RNF5Q99942 180 aa8.7□□□□□ -1.02
PKNOX1-201ENST00000291547 GFRA4Q9GZZ7 299 aa8.7□□□□□ -1.02
PKNOX1-201ENST00000291547 ZNF672Q499Z4 452 aaPredicted RBP8.7□□□□□ -1.02
PKNOX1-201ENST00000291547 PRSS57Q6UWY2 283 aa8.7□□□□□ -1.02
PKNOX1-201ENST00000291547 H0YJW9 148 aa8.7□□□□□ -1.02
PKNOX1-201ENST00000291547 EFNA2O43921 213 aa8.7□□□□□ -1.02
PKNOX1-201ENST00000291547 FGF6P10767 208 aa8.7□□□□□ -1.02
PKNOX1-201ENST00000291547 KLRD1Q13241 179 aa8.7□□□□□ -1.02
PKNOX1-201ENST00000291547 TRACP01848 142 aa8.7□□□□□ -1.02
PKNOX1-201ENST00000291547 IGLC1P0CG04 106 aa8.7□□□□□ -1.02
PKNOX1-201ENST00000291547 RNF144BQ7Z419 303 aa8.7□□□□□ -1.02
PKNOX1-201ENST00000291547 SS18L2Q9UHA2 77 aa8.7□□□□□ -1.02
PKNOX1-201ENST00000291547 RNASE2P10153 161 aaKnown RBP8.69□□□□□ -1.02
PKNOX1-201ENST00000291547 RPL35AP18077 110 aaKnown RBP8.69□□□□□ -1.02
PKNOX1-201ENST00000291547 VMO1Q7Z5L0 202 aa8.69□□□□□ -1.02
PKNOX1-201ENST00000291547 SIGLEC9Q9Y336 463 aa8.69□□□□□ -1.02
PKNOX1-201ENST00000291547 PLCE1Q9P212 2302 aa8.69□□□□□ -1.02
PKNOX1-201ENST00000291547 C5orf63A6NC05 138 aa8.69□□□□□ -1.02
PKNOX1-201ENST00000291547 PINLYPA6NC86 204 aa8.69□□□□□ -1.02
PKNOX1-201ENST00000291547 PFN2P35080 140 aa8.69□□□□□ -1.02
PKNOX1-201ENST00000291547 UBE2DNLQ8IWF7 75 aa8.69□□□□□ -1.02
PKNOX1-201ENST00000291547 CLUHP3Q96NS8 147 aa8.69□□□□□ -1.02
PKNOX1-201ENST00000291547 A0A1W2PPM0 123 aa8.69□□□□□ -1.02
PKNOX1-201ENST00000291547 IGLL1P15814 213 aa8.69□□□□□ -1.02
PKNOX1-201ENST00000291547 POU2AF1Q16633 256 aa8.69□□□□□ -1.02
PKNOX1-201ENST00000291547 UTF1Q5T230 341 aa8.69□□□□□ -1.02
PKNOX1-201ENST00000291547 RHPN1-AS1Q9BWJ2 59 aa8.69□□□□□ -1.02
PKNOX1-201ENST00000291547 TMEM126AQ9H061 195 aa8.69□□□□□ -1.02
PKNOX1-201ENST00000291547 TRBV7-1A0A0A6YYK4 115 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms