RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 H3BMG7 143 aa9.19□□□□□ -0.94
NPC1L1-201ENST00000289547 TNFRSF6BO95407 300 aa9.19□□□□□ -0.94
NPC1L1-201ENST00000289547 LAGE3Q14657 143 aa9.19□□□□□ -0.94
NPC1L1-201ENST00000289547 ASCL2Q99929 193 aa9.19□□□□□ -0.94
NPC1L1-201ENST00000289547 PLA2G2AP14555 144 aa9.18□□□□□ -0.94
NPC1L1-201ENST00000289547 MYOD1P15172 320 aa9.18□□□□□ -0.94
NPC1L1-201ENST00000289547 C2orf82Q6UX34 121 aa9.18□□□□□ -0.94
NPC1L1-201ENST00000289547 TMEM158Q8WZ71 300 aa9.18□□□□□ -0.94
NPC1L1-201ENST00000289547 SRSF8Q9BRL6 282 aaKnown RBP9.18□□□□□ -0.94
NPC1L1-201ENST00000289547 C21orf62Q9NYP8 219 aa9.18□□□□□ -0.94
NPC1L1-201ENST00000289547 PLNP26678 52 aa9.18□□□□□ -0.94
NPC1L1-201ENST00000289547 AMTNQ6UX39 209 aa9.18□□□□□ -0.94
NPC1L1-201ENST00000289547 RNF125Q96EQ8 232 aa9.18□□□□□ -0.94
NPC1L1-201ENST00000289547 B5MCH6 92 aa9.18□□□□□ -0.94
NPC1L1-201ENST00000289547 TEX48A0A1B0GUV7 120 aa9.17□□□□□ -0.94
NPC1L1-201ENST00000289547 PMS2P5A8MQ11 134 aa9.17□□□□□ -0.94
NPC1L1-201ENST00000289547 ARMS2P0C7Q2 107 aa9.17□□□□□ -0.94
NPC1L1-201ENST00000289547 PEMTQ9UBM1 199 aa9.17□□□□□ -0.94
NPC1L1-201ENST00000289547 SS18L2Q9UHA2 77 aa9.17□□□□□ -0.94
NPC1L1-201ENST00000289547 DOCK7Q96N67 2140 aa9.17□□□□□ -0.94
NPC1L1-201ENST00000289547 ATXN8Q156A1 80 aa9.17□□□□□ -0.94
NPC1L1-201ENST00000289547 MLANAQ16655 118 aa9.17□□□□□ -0.94
NPC1L1-201ENST00000289547 PPDPFLQ8WWR9 84 aa9.17□□□□□ -0.94
NPC1L1-201ENST00000289547 IGHV3-64A0A075B6Q5 118 aa9.17□□□□□ -0.94
NPC1L1-201ENST00000289547 TRBV6-6A0A0A6YYG2 114 aa9.17□□□□□ -0.94
NPC1L1-201ENST00000289547 RAX2Q96IS3 184 aa9.17□□□□□ -0.94
NPC1L1-201ENST00000289547 VGLL1Q99990 258 aa9.17□□□□□ -0.94
NPC1L1-201ENST00000289547 EDA2RQ9HAV5 297 aa9.17□□□□□ -0.94
NPC1L1-201ENST00000289547 PKDREJQ9NTG1 2253 aa9.17□□□□□ -0.94
NPC1L1-201ENST00000289547 HS3ST6Q96QI5 342 aa9.16□□□□□ -0.94
NPC1L1-201ENST00000289547 IGKV3-20P01619 116 aa9.16□□□□□ -0.94
NPC1L1-201ENST00000289547 C9orf153Q5TBE3 101 aa9.16□□□□□ -0.94
NPC1L1-201ENST00000289547 ASCL4Q6XD76 172 aa9.16□□□□□ -0.94
NPC1L1-201ENST00000289547 CD177Q8N6Q3 437 aa9.16□□□□□ -0.94
NPC1L1-201ENST00000289547 ZNF407Q9C0G0 2248 aa9.16□□□□□ -0.94
NPC1L1-201ENST00000289547 MAPK1IP1LQ8NDC0 245 aa9.16□□□□□ -0.94
NPC1L1-201ENST00000289547 SPANXA1Q9NS26 97 aa9.16□□□□□ -0.94
NPC1L1-201ENST00000289547 RNF114Q9Y508 228 aa9.16□□□□□ -0.94
NPC1L1-201ENST00000289547 K7ERJ3 54 aa9.15□□□□□ -0.94
NPC1L1-201ENST00000289547 BRD3OSQ6XYD6 125 aa9.15□□□□□ -0.94
NPC1L1-201ENST00000289547 SEM1Q6ZVN7 128 aa9.15□□□□□ -0.94
NPC1L1-201ENST00000289547 NBASA2RRP1 2371 aa9.15□□□□□ -0.94
NPC1L1-201ENST00000289547 IGKV3OR2-268A0A0C4DH90 116 aa9.15□□□□□ -0.94
NPC1L1-201ENST00000289547 TRBV7-9A0A0J9YWB2 115 aa9.15□□□□□ -0.94
NPC1L1-201ENST00000289547 H3BUX3 64 aa9.15□□□□□ -0.94
NPC1L1-201ENST00000289547 TIMM23O14925 209 aa9.15□□□□□ -0.94
NPC1L1-201ENST00000289547 IGKV1-39P01597 117 aa9.15□□□□□ -0.94
NPC1L1-201ENST00000289547 IGKV1D-39P04432 117 aa9.15□□□□□ -0.94
NPC1L1-201ENST00000289547 ZNF329Q86UD4 541 aa9.15□□□□□ -0.94
NPC1L1-201ENST00000289547 LRRC75A-AS1Q8N1F1 130 aa9.15□□□□□ -0.94
NPC1L1-201ENST00000289547 RNF182Q8N6D2 247 aa9.15□□□□□ -0.94
NPC1L1-201ENST00000289547 RNF5Q99942 180 aa9.15□□□□□ -0.94
NPC1L1-201ENST00000289547 H7C1H1 209 aa9.15□□□□□ -0.94
NPC1L1-201ENST00000289547 UBE2E1P51965 193 aa9.15□□□□□ -0.94
NPC1L1-201ENST00000289547 M0R2P5 195 aa9.15□□□□□ -0.95
NPC1L1-201ENST00000289547 LYPD2Q6UXB3 125 aa9.15□□□□□ -0.95
NPC1L1-201ENST00000289547 A0A1W2PRX2 142 aa9.14□□□□□ -0.95
NPC1L1-201ENST00000289547 TOMM40O96008 361 aa9.14□□□□□ -0.95
NPC1L1-201ENST00000289547 CFHR2P36980 270 aa9.14□□□□□ -0.95
NPC1L1-201ENST00000289547 PVRIGQ6DKI7 326 aa9.14□□□□□ -0.95
NPC1L1-201ENST00000289547 IGKV2-40A0A087WW87 121 aaPredicted RBP9.14□□□□□ -0.95
NPC1L1-201ENST00000289547 A0A0U1RRA0 63 aa9.14□□□□□ -0.95
NPC1L1-201ENST00000289547 GAGE12JA6NER3 117 aa9.14□□□□□ -0.95
NPC1L1-201ENST00000289547 GAGE7O76087 117 aa9.14□□□□□ -0.95
NPC1L1-201ENST00000289547 IGKV2D-40P01614 121 aaPredicted RBP9.14□□□□□ -0.95
NPC1L1-201ENST00000289547 GAGE12FP0CL80 117 aa9.14□□□□□ -0.95
NPC1L1-201ENST00000289547 GAGE12GP0CL81 117 aa9.14□□□□□ -0.95
NPC1L1-201ENST00000289547 GAGE12IP0CL82 117 aa9.14□□□□□ -0.95
NPC1L1-201ENST00000289547 GAGE4Q13068 117 aa9.14□□□□□ -0.95
NPC1L1-201ENST00000289547 ANXA2RQ3ZCQ2 193 aa9.14□□□□□ -0.95
NPC1L1-201ENST00000289547 ZNF562Q6V9R5 426 aa9.14□□□□□ -0.95
NPC1L1-201ENST00000289547 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.14□□□□□ -0.95
NPC1L1-201ENST00000289547 LINC01549A6NIU2 74 aa9.14□□□□□ -0.95
NPC1L1-201ENST00000289547 GGTLC3B5MD39 225 aa9.14□□□□□ -0.95
NPC1L1-201ENST00000289547 GAGE5Q13069 117 aa9.14□□□□□ -0.95
NPC1L1-201ENST00000289547 GAGE6Q13070 117 aa9.14□□□□□ -0.95
NPC1L1-201ENST00000289547 ASPHD1Q5U4P2 390 aa9.14□□□□□ -0.95
NPC1L1-201ENST00000289547 SMIM27A0A1W2PRY6 76 aa9.14□□□□□ -0.95
NPC1L1-201ENST00000289547 PRSS47A8MTI9 375 aa9.14□□□□□ -0.95
NPC1L1-201ENST00000289547 ZNF524Q96C55 264 aa9.14□□□□□ -0.95
NPC1L1-201ENST00000289547 IGKV1D-17A0A075B6S4 117 aa9.13□□□□□ -0.95
NPC1L1-201ENST00000289547 IGHV1-69DA0A0B4J2H0 117 aa9.13□□□□□ -0.95
NPC1L1-201ENST00000289547 UBE2L6O14933 153 aa9.13□□□□□ -0.95
NPC1L1-201ENST00000289547 IGHV1-69P01742 117 aa9.13□□□□□ -0.95
NPC1L1-201ENST00000289547 KLRD1Q13241 179 aa9.13□□□□□ -0.95
NPC1L1-201ENST00000289547 TNFRSF18Q9Y5U5 241 aa9.13□□□□□ -0.95
NPC1L1-201ENST00000289547 IGKV3D-20A0A0C4DH25 116 aa9.13□□□□□ -0.95
NPC1L1-201ENST00000289547 Q6P435 159 aa9.13□□□□□ -0.95
NPC1L1-201ENST00000289547 SMIM20Q8N5G0 67 aa9.13□□□□□ -0.95
NPC1L1-201ENST00000289547 DDB2Q92466 427 aa9.13□□□□□ -0.95
NPC1L1-201ENST00000289547 SH2D6Q7Z4S9 175 aa9.13□□□□□ -0.95
NPC1L1-201ENST00000289547 DEFB104AQ8WTQ1 72 aa9.13□□□□□ -0.95
NPC1L1-201ENST00000289547 SLC25A39Q9BZJ4 359 aaPredicted RBP9.13□□□□□ -0.95
NPC1L1-201ENST00000289547 PCDH15Q96QU1 1955 aa9.13□□□□□ -0.95
NPC1L1-201ENST00000289547 NSUN5P1Q3KNT7 163 aa9.13□□□□□ -0.95
NPC1L1-201ENST00000289547 TEX36Q5VZQ5 186 aa9.13□□□□□ -0.95
NPC1L1-201ENST00000289547 GFRA4Q9GZZ7 299 aa9.13□□□□□ -0.95
NPC1L1-201ENST00000289547 IFITM1P13164 125 aa9.12□□□□□ -0.95
NPC1L1-201ENST00000289547 LGALS9BQ3B8N2 356 aa9.12□□□□□ -0.95
NPC1L1-201ENST00000289547 LGALS9CQ6DKI2 356 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms