RNA–Protein interactions for RNA: ENST00000285176.13

CCDC144B-201, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

BASIC

Gene CCDC144B, Length 4,310 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-201ENST00000285176 KCNS1Q96KK3 526 aa7.14□□□□□ -1.27
CCDC144B-201ENST00000285176 AP5S1Q9NUS5 200 aa7.14□□□□□ -1.27
CCDC144B-201ENST00000285176 MXRA5Q9NR99 2828 aa7.14□□□□□ -1.27
CCDC144B-201ENST00000285176 C9JCJ5 164 aa7.14□□□□□ -1.27
CCDC144B-201ENST00000285176 TMEM97Q5BJF2 176 aa7.14□□□□□ -1.27
CCDC144B-201ENST00000285176 TMEM170AQ8WVE7 144 aa7.14□□□□□ -1.27
CCDC144B-201ENST00000285176 IGLC7A0M8Q6 106 aa7.14□□□□□ -1.27
CCDC144B-201ENST00000285176 IGLV2-23P01705 113 aa7.14□□□□□ -1.27
CCDC144B-201ENST00000285176 SNRPD3P62318 126 aaKnown RBP7.14□□□□□ -1.27
CCDC144B-201ENST00000285176 FAM159AQ6UWV7 190 aa7.14□□□□□ -1.27
CCDC144B-201ENST00000285176 LINC00479Q96M42 142 aa7.14□□□□□ -1.27
CCDC144B-201ENST00000285176 OTORQ9NRC9 128 aa7.14□□□□□ -1.27
CCDC144B-201ENST00000285176 F11RQ9Y624 299 aaKnown RBP7.14□□□□□ -1.27
CCDC144B-201ENST00000285176 TRBV20OR9-2A0A075B6H5 130 aa7.13□□□□□ -1.27
CCDC144B-201ENST00000285176 IGKV1OR2-108A0A075B7D4 117 aa7.13□□□□□ -1.27
CCDC144B-201ENST00000285176 CBY3A6NI87 242 aa7.13□□□□□ -1.27
CCDC144B-201ENST00000285176 DDTP30046 118 aa7.13□□□□□ -1.27
CCDC144B-201ENST00000285176 Q1RN00 199 aa7.13□□□□□ -1.27
CCDC144B-201ENST00000285176 SPATA45Q537H7 98 aa7.13□□□□□ -1.27
CCDC144B-201ENST00000285176 TNFRSF13BO14836 293 aaPredicted RBP7.13□□□□□ -1.27
CCDC144B-201ENST00000285176 PPIFP30405 207 aaKnown RBP7.13□□□□□ -1.27
CCDC144B-201ENST00000285176 GFI1BQ5VTD9 330 aa7.13□□□□□ -1.27
CCDC144B-201ENST00000285176 ZNF562Q6V9R5 426 aa7.13□□□□□ -1.27
CCDC144B-201ENST00000285176 OR4C5Q8NGB2 326 aa7.13□□□□□ -1.27
CCDC144B-201ENST00000285176 MAP1LC3AQ9H492 121 aa7.13□□□□□ -1.27
CCDC144B-201ENST00000285176 CDC42EP3Q9UKI2 254 aa7.13□□□□□ -1.27
CCDC144B-201ENST00000285176 PSG8Q9UQ74 426 aa7.13□□□□□ -1.27
CCDC144B-201ENST00000285176 TBL2Q9Y4P3 447 aaKnown RBP7.13□□□□□ -1.27
CCDC144B-201ENST00000285176 TRAV8-1A0A0A6YYK1 113 aa7.13□□□□□ -1.27
CCDC144B-201ENST00000285176 ITGB1BP1O14713 200 aa7.13□□□□□ -1.27
CCDC144B-201ENST00000285176 SERF1AO75920 110 aa7.13□□□□□ -1.27
CCDC144B-201ENST00000285176 FOLR2P14207 255 aa7.13□□□□□ -1.27
CCDC144B-201ENST00000285176 NSUN5P1Q3KNT7 163 aa7.13□□□□□ -1.27
CCDC144B-201ENST00000285176 MORN5Q5VZ52 161 aa7.13□□□□□ -1.27
CCDC144B-201ENST00000285176 SLC25A39Q9BZJ4 359 aaPredicted RBP7.13□□□□□ -1.27
CCDC144B-201ENST00000285176 OSTCQ9NRP0 149 aa7.13□□□□□ -1.27
CCDC144B-201ENST00000285176 IGHV7-81A0A0B4J1V7 117 aa7.13□□□□□ -1.27
CCDC144B-201ENST00000285176 A0A1B0GW64 132 aa7.13□□□□□ -1.27
CCDC144B-201ENST00000285176 NPIPB5A8MRT5 1133 aa7.13□□□□□ -1.27
CCDC144B-201ENST00000285176 PAX1P15863 534 aa7.13□□□□□ -1.27
CCDC144B-201ENST00000285176 FAM90A2PQ658T7 463 aa7.13□□□□□ -1.27
CCDC144B-201ENST00000285176 LY6G5BQ8NDX9 201 aa7.13□□□□□ -1.27
CCDC144B-201ENST00000285176 C18orf15Q96N68 181 aa7.13□□□□□ -1.27
CCDC144B-201ENST00000285176 NCOR1P1Q9H4R4 102 aa7.13□□□□□ -1.27
CCDC144B-201ENST00000285176 TRBV24-1A0A075B6N3 115 aa7.12□□□□□ -1.27
CCDC144B-201ENST00000285176 IZUMO1RA6ND01 250 aa7.12□□□□□ -1.27
CCDC144B-201ENST00000285176 ZNF726P1Q15940 193 aa7.12□□□□□ -1.27
CCDC144B-201ENST00000285176 OR10AG1Q8NH19 301 aa7.12□□□□□ -1.27
CCDC144B-201ENST00000285176 ZNF502Q8TBZ5 544 aa7.12□□□□□ -1.27
CCDC144B-201ENST00000285176 OR4C46A6NHA9 309 aa7.12□□□□□ -1.27
CCDC144B-201ENST00000285176 M0R3E3 92 aa7.12□□□□□ -1.27
CCDC144B-201ENST00000285176 NUDT3O95989 172 aa7.12□□□□□ -1.27
CCDC144B-201ENST00000285176 GZMBP10144 247 aa7.12□□□□□ -1.27
CCDC144B-201ENST00000285176 CD33P20138 364 aa7.12□□□□□ -1.27
CCDC144B-201ENST00000285176 ADMP35318 185 aa7.12□□□□□ -1.27
CCDC144B-201ENST00000285176 RNF5Q99942 180 aa7.12□□□□□ -1.27
CCDC144B-201ENST00000285176 SCGB1C2P0DMR2 95 aa7.12□□□□□ -1.27
CCDC144B-201ENST00000285176 PMCHL1Q16048 86 aa7.12□□□□□ -1.27
CCDC144B-201ENST00000285176 Q8N9W7 124 aa7.12□□□□□ -1.27
CCDC144B-201ENST00000285176 ZFP30Q9Y2G7 519 aa7.12□□□□□ -1.27
CCDC144B-201ENST00000285176 HINT1P49773 126 aaPredicted RBP7.11□□□□□ -1.27
CCDC144B-201ENST00000285176 SRSF9Q13242 221 aaKnown RBP eCLIP7.11□□□□□ -1.27
CCDC144B-201ENST00000285176 NPFFR1Q9GZQ6 430 aa7.11□□□□□ -1.27
CCDC144B-201ENST00000285176 TMEM242Q9NWH2 141 aa7.11□□□□□ -1.27
CCDC144B-201ENST00000285176 FABP5P3A8MUU1 101 aa7.11□□□□□ -1.27
CCDC144B-201ENST00000285176 ZNF25P17030 456 aaPredicted RBP7.11□□□□□ -1.27
CCDC144B-201ENST00000285176 PAX8Q06710 450 aa7.11□□□□□ -1.27
CCDC144B-201ENST00000285176 EIF4EBP1Q13541 118 aaPredicted RBP7.11□□□□□ -1.27
CCDC144B-201ENST00000285176 FER1L6-AS1Q8NA97 138 aa7.11□□□□□ -1.27
CCDC144B-201ENST00000285176 NUDT10Q8NFP7 164 aa7.11□□□□□ -1.27
CCDC144B-201ENST00000285176 NUDT11Q96G61 164 aa7.11□□□□□ -1.27
CCDC144B-201ENST00000285176 PRELID3AQ96N28 172 aa7.11□□□□□ -1.27
CCDC144B-201ENST00000285176 TRGV9Q99603 122 aa7.11□□□□□ -1.27
CCDC144B-201ENST00000285176 HIVEP1P15822 2718 aa7.11□□□□□ -1.27
CCDC144B-201ENST00000285176 APOHP02749 345 aaPredicted RBP7.11□□□□□ -1.27
CCDC144B-201ENST00000285176 IGHV4-31P0DP07 118 aa7.11□□□□□ -1.27
CCDC144B-201ENST00000285176 TEX29Q8N6K0 151 aa7.11□□□□□ -1.27
CCDC144B-201ENST00000285176 VPS25Q9BRG1 176 aa7.11□□□□□ -1.27
CCDC144B-201ENST00000285176 NOTCH1P46531 2555 aa7.11□□□□□ -1.27
CCDC144B-201ENST00000285176 OOSP1A8MZH6 123 aa7.1□□□□□ -1.27
CCDC144B-201ENST00000285176 M0QZK8 103 aa7.1□□□□□ -1.27
CCDC144B-201ENST00000285176 FAM71F2Q6NXP2 309 aa7.1□□□□□ -1.27
CCDC144B-201ENST00000285176 GSN-AS1Q9NRJ2 163 aa7.1□□□□□ -1.27
CCDC144B-201ENST00000285176 DMRT1Q9Y5R6 373 aa7.1□□□□□ -1.27
CCDC144B-201ENST00000285176 IGKV2-40A0A087WW87 121 aaPredicted RBP7.1□□□□□ -1.27
CCDC144B-201ENST00000285176 IGKV2D-40P01614 121 aaPredicted RBP7.1□□□□□ -1.27
CCDC144B-201ENST00000285176 TSPOP30536 169 aa7.1□□□□□ -1.27
CCDC144B-201ENST00000285176 FAM209BQ5JX69 171 aa7.1□□□□□ -1.27
CCDC144B-201ENST00000285176 SYT8Q8NBV8 401 aa7.1□□□□□ -1.27
CCDC144B-201ENST00000285176 C14orf144Q96I85 54 aa7.1□□□□□ -1.27
CCDC144B-201ENST00000285176 PRSS22Q9GZN4 317 aa7.1□□□□□ -1.27
CCDC144B-201ENST00000285176 TRBV12-3P01733 135 aa7.1□□□□□ -1.27
CCDC144B-201ENST00000285176 TCRAP04437 139 aa7.1□□□□□ -1.27
CCDC144B-201ENST00000285176 RNASE4P34096 147 aaKnown RBP7.1□□□□□ -1.27
CCDC144B-201ENST00000285176 ZNF56Q15929 161 aa7.1□□□□□ -1.27
CCDC144B-201ENST00000285176 OR4X2Q8NGF9 303 aa7.1□□□□□ -1.27
CCDC144B-201ENST00000285176 ZNF418Q8TF45 676 aaPredicted RBP7.1□□□□□ -1.27
CCDC144B-201ENST00000285176 PSMB11A5LHX3 300 aa7.09□□□□□ -1.27
CCDC144B-201ENST00000285176 CFHR4Q92496 578 aa7.09□□□□□ -1.27
CCDC144B-201ENST00000285176 RAX2Q96IS3 184 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms