RNA–Protein interactions for RNA: ENST00000283254.11

SCN3A-201, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN3A, Length 9,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-201ENST00000283254 LINC00527Q9UJ94 153 aa3.31□□□□□ -1.88
SCN3A-201ENST00000283254 VPREB3Q9UKI3 123 aa3.31□□□□□ -1.88
SCN3A-201ENST00000283254 TRBV20-1A0A075B6N2 111 aa3.3□□□□□ -1.88
SCN3A-201ENST00000283254 IGKV1D-43A0A0B4J1Z2 117 aa3.3□□□□□ -1.88
SCN3A-201ENST00000283254 SNAI2O43623 268 aa3.3□□□□□ -1.88
SCN3A-201ENST00000283254 NABP1Q96AH0 204 aa3.3□□□□□ -1.88
SCN3A-201ENST00000283254 UBE2WQ96B02 151 aa3.3□□□□□ -1.88
SCN3A-201ENST00000283254 ZNF492Q9P255 531 aa3.3□□□□□ -1.88
SCN3A-201ENST00000283254 IGHV3-73A0A0B4J1V6 119 aa3.3□□□□□ -1.88
SCN3A-201ENST00000283254 PRSS29PA6NIE9 313 aa3.3□□□□□ -1.88
SCN3A-201ENST00000283254 FUSP35637 526 aaKnown RBP eCLIP3.3□□□□□ -1.88
SCN3A-201ENST00000283254 SSBP2P81877 361 aaPredicted RBP3.3□□□□□ -1.88
SCN3A-201ENST00000283254 IFITM3Q01628 133 aa3.3□□□□□ -1.88
SCN3A-201ENST00000283254 C10orf55Q5SWW7 151 aa3.3□□□□□ -1.88
SCN3A-201ENST00000283254 UTF1Q5T230 341 aa3.3□□□□□ -1.88
SCN3A-201ENST00000283254 GAGE2AQ6NT46 116 aa3.3□□□□□ -1.88
SCN3A-201ENST00000283254 SH2D1AO60880 128 aa3.3□□□□□ -1.88
SCN3A-201ENST00000283254 PCP4P48539 62 aa3.3□□□□□ -1.88
SCN3A-201ENST00000283254 HERVK_113P63121 156 aa3.3□□□□□ -1.88
SCN3A-201ENST00000283254 ZNF493Q6ZR52 646 aa3.3□□□□□ -1.88
SCN3A-201ENST00000283254 LURAP1LQ8IV03 231 aa3.3□□□□□ -1.88
SCN3A-201ENST00000283254 ZCCHC24Q8N2G6 241 aaKnown RBP3.3□□□□□ -1.88
SCN3A-201ENST00000283254 CITED2Q99967 270 aaPredicted RBP3.3□□□□□ -1.88
SCN3A-201ENST00000283254 DKK4Q9UBT3 224 aa3.3□□□□□ -1.88
SCN3A-201ENST00000283254 RNF222A6NCQ9 220 aa3.3□□□□□ -1.88
SCN3A-201ENST00000283254 IGHV3-53P01767 116 aa3.3□□□□□ -1.88
SCN3A-201ENST00000283254 ZNF474Q6S9Z5 364 aaPredicted RBP3.3□□□□□ -1.88
SCN3A-201ENST00000283254 SCRT1Q9BWW7 348 aa3.3□□□□□ -1.88
SCN3A-201ENST00000283254 HIST1H2BKO60814 126 aa3.3□□□□□ -1.88
SCN3A-201ENST00000283254 HIST1H2BJP06899 126 aa3.3□□□□□ -1.88
SCN3A-201ENST00000283254 SELLP14151 372 aa3.3□□□□□ -1.88
SCN3A-201ENST00000283254 HIST1H2BOP23527 126 aa3.3□□□□□ -1.88
SCN3A-201ENST00000283254 HIST1H2BBP33778 126 aa3.3□□□□□ -1.88
SCN3A-201ENST00000283254 HIST1H2BDP58876 126 aa3.3□□□□□ -1.88
SCN3A-201ENST00000283254 HIST1H2BCP62807 126 aa3.3□□□□□ -1.88
SCN3A-201ENST00000283254 HIST2H2BEQ16778 126 aa3.3□□□□□ -1.88
SCN3A-201ENST00000283254 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.3□□□□□ -1.88
SCN3A-201ENST00000283254 ZC2HC1BQ5TFG8 222 aa3.3□□□□□ -1.88
SCN3A-201ENST00000283254 LINC01551Q86U37 167 aa3.3□□□□□ -1.88
SCN3A-201ENST00000283254 ZNF329Q86UD4 541 aa3.3□□□□□ -1.88
SCN3A-201ENST00000283254 EXOC3-AS1Q8N2X6 119 aa3.3□□□□□ -1.88
SCN3A-201ENST00000283254 HIST1H2BHQ93079 126 aa3.3□□□□□ -1.88
SCN3A-201ENST00000283254 HIST1H2BNQ99877 126 aa3.3□□□□□ -1.88
SCN3A-201ENST00000283254 HIST1H2BMQ99879 126 aa3.3□□□□□ -1.88
SCN3A-201ENST00000283254 H3BQ85 93 aa3.3□□□□□ -1.88
SCN3A-201ENST00000283254 GLRX5Q86SX6 157 aa3.3□□□□□ -1.88
SCN3A-201ENST00000283254 CD177Q8N6Q3 437 aa3.3□□□□□ -1.88
SCN3A-201ENST00000283254 Q8TAT8 98 aa3.3□□□□□ -1.88
SCN3A-201ENST00000283254 ST6GALNAC6Q969X2 333 aa3.3□□□□□ -1.88
SCN3A-201ENST00000283254 TM2D2Q9BX73 214 aa3.3□□□□□ -1.88
SCN3A-201ENST00000283254 REG4Q9BYZ8 158 aa3.3□□□□□ -1.88
SCN3A-201ENST00000283254 MEGF9Q9H1U4 602 aa3.3□□□□□ -1.88
SCN3A-201ENST00000283254 XCL2Q9UBD3 114 aa3.3□□□□□ -1.88
SCN3A-201ENST00000283254 KLF2Q9Y5W3 355 aaPredicted RBP3.3□□□□□ -1.88
SCN3A-201ENST00000283254 TRAV13-2A0A0B4J235 113 aa3.3□□□□□ -1.88
SCN3A-201ENST00000283254 SDHAF1A6NFY7 115 aa3.3□□□□□ -1.88
SCN3A-201ENST00000283254 NCR2O95944 276 aa3.3□□□□□ -1.88
SCN3A-201ENST00000283254 SIGMAR1Q99720 223 aa3.3□□□□□ -1.88
SCN3A-201ENST00000283254 ZNF236Q9UL36 1845 aa3.3□□□□□ -1.88
SCN3A-201ENST00000283254 F8VVB4 439 aa3.29□□□□□ -1.88
SCN3A-201ENST00000283254 F8VWA3 439 aa3.29□□□□□ -1.88
SCN3A-201ENST00000283254 K7EMI3 77 aa3.29□□□□□ -1.88
SCN3A-201ENST00000283254 FOXI2Q6ZQN5 318 aa3.29□□□□□ -1.88
SCN3A-201ENST00000283254 UBE2E2Q96LR5 201 aa3.29□□□□□ -1.88
SCN3A-201ENST00000283254 TSSC4Q9Y5U2 329 aaPredicted RBP3.29□□□□□ -1.88
SCN3A-201ENST00000283254 C5orf63A6NC05 138 aa3.29□□□□□ -1.88
SCN3A-201ENST00000283254 NBL1P41271 181 aa3.29□□□□□ -1.88
SCN3A-201ENST00000283254 OCC1Q8TAD7 63 aa3.29□□□□□ -1.88
SCN3A-201ENST00000283254 LENEPQ9Y5L5 61 aa3.29□□□□□ -1.88
SCN3A-201ENST00000283254 IGHV3-64A0A075B6Q5 118 aa3.29□□□□□ -1.88
SCN3A-201ENST00000283254 ATP6V0E1O15342 81 aa3.29□□□□□ -1.88
SCN3A-201ENST00000283254 NDPQ00604 133 aa3.29□□□□□ -1.88
SCN3A-201ENST00000283254 C2orf66Q6UXQ4 117 aa3.29□□□□□ -1.88
SCN3A-201ENST00000283254 LINC00311Q8N616 119 aa3.29□□□□□ -1.88
SCN3A-201ENST00000283254 OR11H6Q8NGC7 330 aa3.29□□□□□ -1.88
SCN3A-201ENST00000283254 MGAM2Q2M2H8 2515 aa3.29□□□□□ -1.88
SCN3A-201ENST00000283254 EGR2P11161 476 aaPredicted RBP3.29□□□□□ -1.88
SCN3A-201ENST00000283254 TCTEX1D4Q5JR98 221 aa3.29□□□□□ -1.88
SCN3A-201ENST00000283254 PAQR4Q8N4S7 273 aaPredicted RBP3.29□□□□□ -1.88
SCN3A-201ENST00000283254 FLVCR1-AS1Q8TAF5 88 aa3.29□□□□□ -1.88
SCN3A-201ENST00000283254 Q96MF0 132 aa3.29□□□□□ -1.88
SCN3A-201ENST00000283254 TMEM14CQ9P0S9 112 aa3.29□□□□□ -1.88
SCN3A-201ENST00000283254 IGKV1D-17A0A075B6S4 117 aa3.29□□□□□ -1.88
SCN3A-201ENST00000283254 NDUFB1O75438 58 aa3.29□□□□□ -1.88
SCN3A-201ENST00000283254 AZU1P20160 251 aa3.29□□□□□ -1.88
SCN3A-201ENST00000283254 CCL18P55774 89 aa3.29□□□□□ -1.88
SCN3A-201ENST00000283254 KLRD1Q13241 179 aa3.29□□□□□ -1.88
SCN3A-201ENST00000283254 GUSBP1Q15486 140 aa3.29□□□□□ -1.88
SCN3A-201ENST00000283254 LHFPL1Q86WI0 220 aa3.29□□□□□ -1.88
SCN3A-201ENST00000283254 ADAMTSL1Q8N6G6 1762 aa3.29□□□□□ -1.88
SCN3A-201ENST00000283254 A0A087WWL8 130 aa3.29□□□□□ -1.88
SCN3A-201ENST00000283254 GAGE12JA6NER3 117 aa3.29□□□□□ -1.88
SCN3A-201ENST00000283254 GAGE1Q13065 139 aa3.29□□□□□ -1.88
SCN3A-201ENST00000283254 GAGE4Q13068 117 aa3.29□□□□□ -1.88
SCN3A-201ENST00000283254 GAGE5Q13069 117 aa3.29□□□□□ -1.88
SCN3A-201ENST00000283254 SBF1O95248 1867 aa3.29□□□□□ -1.88
SCN3A-201ENST00000283254 RIPPLY3P57055 190 aa3.29□□□□□ -1.88
SCN3A-201ENST00000283254 HGFACQ04756 655 aa3.29□□□□□ -1.88
SCN3A-201ENST00000283254 LINC01545Q5VT33 79 aa3.29□□□□□ -1.88
SCN3A-201ENST00000283254 C8orf31Q8N9H6 132 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms